Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for apbb1

Gene Name Gene ID Reads Annotation
apbb1 ENSDARG00000076560 1748 amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) [Source:ZFIN;Acc:ZDB-GENE-091118-127]










Genes with expression patterns similar to apbb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. apbb1 ENSDARG00000076560 1748 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) [Source:ZFIN;Acc:ZDB-GENE-091118-127]
2. klc2 3058 2.563 - 0.931 - - - 0.716 - 0.916 - kinesin light chain 2
3. ankrd10b ENSDARG00000004771 654 1.91 - - - - - - - 0.962 0.948 ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
4. tubb5 ENSDARG00000037997 18691 1.828 - 0.930 - - - - - 0.898 - tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
5. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.795 - - - - - - 0.835 0.960 - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
6. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 1.783 - 0.979 - - - - 0.804 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
7. erbb2 ENSDARG00000026294, ENSDARG00000112475 2704 1.783 - 0.930 - - - - - - 0.853 erb-b2 receptor tyrosine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-031118-121]
8. nlk1 ENSDARG00000006566 1123 1.763 - - - - - 0.807 - 0.956 - nemo-like kinase, type 1 [Source:ZFIN;Acc:ZDB-GENE-040701-1]
9. ift46 ENSDARG00000011240 2499 1.763 - - - - - - 0.799 0.964 - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
10. CU862021.1 CU862021.1 5925 1.743 - - - - - - - 0.895 0.848
11. nutf2l ENSDARG00000014499 3927 1.724 - 0.923 - - - - - 0.801 - nuclear transport factor 2, like [Source:ZFIN;Acc:ZDB-GENE-020416-1]
12. tet2 ENSDARG00000076928 2190 1.719 - - - - - - - 0.845 0.874 tet methylcytosine dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-090312-98]
13. DVL3 1098 1.715 - - - - - - 0.749 0.966 - dishevelled segment polarity protein 3
14. SMAD4 SMAD4 3233 1.697 - 0.933 - - - - - 0.764 -
15. med20 ENSDARG00000046006 614 1.694 - - - - - - 0.720 0.974 - mediator complex subunit 20 [Source:ZFIN;Acc:ZDB-GENE-040801-104]
16. clasp2 ENSDARG00000020345 3382 1.674 - - - - - 0.718 - 0.956 - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
17. calm1b ENSDARG00000034187 13158 1.667 - 0.882 - - - - - 0.785 - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
18. MAPRE2 ENSDARG00000099943 3041 1.665 - - - - - - 0.753 - 0.912 microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
19. pdia4 ENSDARG00000018491 1914 1.658 - - - - - - 0.734 - 0.924 protein disulfide isomerase family A, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5493]
20. dldh ENSDARG00000008785 15202 1.649 - 0.868 - - - - - 0.781 - dihydrolipoamide dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040120-4]
21. hmgb3a ENSDARG00000056725 15668 1.647 - - - - - - 0.770 0.877 - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
22. psmd13 ENSDARG00000016239 4229 1.63 - - - - - - 0.768 - 0.862 proteasome 26S subunit, non-ATPase 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1004]
23. BAZ2B BAZ2B 3285 1.627 - - - - - - 0.716 0.911 -
24. sumo3a ENSDARG00000028119 13447 1.624 - 0.904 - - - - 0.720 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
25. ube2i ube2i 13024 1.591 - - - - - - 0.727 0.864 -
26. hnrnpub ENSDARG00000004735 16496 1.59 - 0.830 - - - - 0.760 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
27. tcf3b ENSDARG00000099999, ENSDARG00000112646 3589 1.589 - - - - - - 0.729 0.860 - transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-051113-64]
28. ptges3b ENSDARG00000089626 5666 1.52 - - - - - - - 0.741 0.779 prostaglandin E synthase 3b (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040625-144]
29. map1lc3b ENSDARG00000101127 3958 1.512 - - - - - - 0.734 - 0.778 microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
30. C1H4orf27 C1H4orf27 1961 1.496 - - - - - 0.735 0.761 - -
31. irx3b ENSDARG00000031138 2538 1.494 - - - - - - 0.734 - 0.760 iroquois homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-030131-525]
32. h2afva ENSDARG00000068820 16427 1.463 - - - - - 0.746 0.717 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
33. cd99l2 ENSDARG00000056722 5036 1.461 - - - - - - 0.708 - 0.753 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
34. nkain1 ENSDARG00000006859 1961 1.452 - - - - - 0.718 0.734 - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
35. hat1 ENSDARG00000034916 5712 1.427 - - - - - 0.714 0.713 - - histone acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-99]
36. h2afx ENSDARG00000029406 2116 1.427 - - - - - 0.706 0.721 - - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
37. fbxo11a ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 1129 0.999 - 0.999 - - - - - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
38. b4galt7 ENSDARG00000021899 546 0.984 - - - - - - - 0.984 - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
39. aebp1 ENSDARG00000091726 906 0.981 - - - - - - - 0.981 - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
40. pold3 ENSDARG00000076169 694 0.974 - - - - - - - 0.974 - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
41. si:ch211-209n20.57 si:ch211-209n20.57 1188 0.973 - - - - - - - 0.973 -
42. CABZ01038494.1 ENSDARG00000088258 908 0.973 - - - - - - - 0.973 - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
43. SB:CB827 SB:CB827 245 0.972 - - - - - - - 0.972 -
44. crb2a ENSDARG00000060106 1307 0.972 - - - - - - - 0.972 - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
45. lrrc4.2 ENSDARG00000003020 235 0.972 - - - - - - - 0.972 - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
46. psmd5 ENSDARG00000059046 622 0.972 - - - - - - - 0.972 - proteasome 26S subunit, non-ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-050417-28]
47. nup43 ENSDARG00000043884 794 0.972 - - - - - - - 0.972 - nucleoporin 43 [Source:ZFIN;Acc:ZDB-GENE-040426-2533]
48. chd5 ENSDARG00000105083 132 0.971 - - - - - - - 0.971 - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
49. nkain4 ENSDARG00000062699 377 0.971 - - - - - - - 0.971 - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
50. tchp ENSDARG00000035605 1695 0.971 - - - - - - - 0.971 - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
51. brms1la ENSDARG00000006235 2011 0.971 - - - - - - - 0.971 - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
52. KIRREL3 ENSDARG00000115903 206 0.971 - - - - - - - 0.971 - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
53. B3GNT1 B3GNT1 601 0.971 - - - - - - - 0.971 -
54. DEDD ENSDARG00000029783 530 0.971 - - - - - - - 0.971 - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
55. MANEAL ENSDARG00000056450 262 0.971 - - - - - - - 0.971 - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
56. zgc:171727 ENSDARG00000105781 350 0.971 - - - - - - - 0.971 - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
57. anapc5 ENSDARG00000008461 434 0.971 - - - - - - - 0.971 - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
58. XKR7 ENSDARG00000026333 175 0.971 - - - - - - - 0.971 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
59. bsk146 ENSDARG00000099069 274 0.971 - - - - - - - 0.971 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
60. BX322612.1 BX322612.1 236 0.971 - - - - - - - 0.971 -
61. TTC28 ENSDARG00000114920 580 0.971 - - - - - - - 0.971 - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
62. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 0.971 - - - - - - - 0.971 - S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
63. si:ch211-113a14.18 ENSDARG00000051735 1253 0.97 - - - - - - - 0.970 - si:ch211-113a14.18 [Source:ZFIN;Acc:ZDB-GENE-121214-116]
64. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 0.97 - - - - - - - 0.970 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
65. grna ENSDARG00000004954 189 0.97 - - - - - - - 0.970 - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
66. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.97 - - - - - - - 0.970 - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
67. ZNF784_2 ZNF784_2 181 0.97 - - - - - - - 0.970 -
68. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 0.97 - - - - - - - 0.970 - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
69. map7d2b ENSDARG00000045316 702 0.97 - - - - - - - 0.970 - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
70. rapgef1a ENSDARG00000043593 416 0.97 - - - - - - - 0.970 - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
71. ank3a ENSDARG00000061736 361 0.97 - - - - - - - 0.970 - ankyrin 3a [Source:ZFIN;Acc:ZDB-GENE-060621-1]
72. fstl5 ENSDARG00000040198 213 0.97 - - - - - - - 0.970 - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
73. ift20 ENSDARG00000040556 285 0.97 - - - - - - - 0.970 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
74. ppp1r8 ppp1r8 310 0.97 - - - - - - - 0.970 -
75. xkr6 xkr6 286 0.97 - - - - - - - 0.970 -
76. sh3bp5a ENSDARG00000100529 642 0.97 - - - - - - - 0.970 - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
77. GANAB_1 GANAB_1 685 0.97 - - - - - - - 0.970 -
78. sgsm3 ENSDARG00000019038 352 0.97 - - - - - - - 0.970 - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
79. eef1a1a ENSDARG00000039502 234 0.97 - - - - - - - 0.970 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
80. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 0.97 - - - - - - - 0.970 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
81. epb41a ENSDARG00000099283 860 0.969 - - - - - - - 0.969 - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
82. C12H10orf118 C12H10orf118 964 0.969 - - - - - - - 0.969 -
83. cetn2 ENSDARG00000101510 541 0.969 - - - - - - - 0.969 - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
84. THEM4 ENSDARG00000061621 364 0.969 - - - - - - - 0.969 - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
85. SIPA1L3 ENSDARG00000061699 268 0.969 - - - - - - - 0.969 - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
86. wdr47a ENSDARG00000078136 522 0.969 - - - - - - - 0.969 - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
87. mapre3b ENSDARG00000102878 362 0.969 - - - - - - - 0.969 - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
88. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.969 - - - - - - - 0.969 - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
89. wdr92 ENSDARG00000037334 329 0.969 - - - - - - - 0.969 - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
90. ghitm 1443 0.969 - - - - - - - 0.969 - growth hormone inducible transmembrane protein
91. pcdh10b ENSDARG00000102824 732 0.968 - - - - - - - 0.968 - protocadherin 10b [Source:ZFIN;Acc:ZDB-GENE-030721-4]
92. irf2a ENSDARG00000007387 915 0.968 - - - - - - - 0.968 - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
93. CR354611.2 CR354611.2 2040 0.968 - - - - - - - 0.968 -
94. LTN1 ENSDARG00000003984 1076 0.967 - - - - - - - 0.967 - listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:13082]
95. PRRT2 ENSDARG00000103588 913 0.967 - - - - - - - 0.967 - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
96. LDLRAD4 LDLRAD4 1237 0.967 - - - - - - - 0.967 -
97. si:ch211-195b13.1 ENSDARG00000016623 427 0.967 - - - - - - - 0.967 - si:ch211-195b13.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7626]
98. LPL_1 LPL_1 1150 0.967 - - - - - - - 0.967 -
99. Sep-06 Sep-06 5465 0.967 - - - - - - - 0.967 -
100. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 0.967 - - - - - - - 0.967 - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]

There are 753 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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