Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for apba1b

Gene Name Gene ID Reads Annotation
apba1b ENSDARG00000074328 254 amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]










Genes with expression patterns similar to apba1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. apba1b ENSDARG00000074328 254 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]
2. mapre3a ENSDARG00000020231 100 2.529 - - - - - 0.850 0.863 0.816 - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
3. lhfpl4a ENSDARG00000111810 206 2.478 - - - 0.919 - 0.801 0.758 - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
4. smad3b ENSDARG00000010207 951 2.477 0.885 - - 0.857 - 0.735 - - - SMAD family member 3b [Source:ZFIN;Acc:ZDB-GENE-030128-4]
5. mark4a ENSDARG00000023914, ENSDARG00000112220 445 2.401 - - - 0.867 - 0.787 0.747 - - MAP/microtubule affinity-regulating kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060531-156]
6. CDK5R1 CDK5R1 562 2.385 - 0.703 - - - 0.861 0.821 - -
7. RNF145 RNF145 1364 2.375 - - - 0.746 - 0.806 0.823 - -
8. map1aa ENSDARG00000059601 599 2.36 - - - 0.822 - 0.788 0.750 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
9. ANK1_1 ANK1_1 507 2.353 - 0.739 - - - 0.775 0.839 - -
10. si:ch211-10a23.2 ENSDARG00000060656 471 2.32 - - - - - 0.799 0.788 0.733 - si:ch211-10a23.2 [Source:ZFIN;Acc:ZDB-GENE-090313-9]
11. mnx2b ENSDARG00000030350 484 2.302 - 0.860 - - - 0.716 0.726 - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
12. SPTBN4_1 ENSDARG00000092624 473 1.835 - - - - - 0.897 0.938 - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
13. DNER ENSDARG00000061031 123 1.813 - - - - - 0.902 0.911 - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
14. tmie ENSDARG00000069423 305 1.798 - - - - - 0.968 0.830 - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
15. lin7b ENSDARG00000037932 150 1.786 - - - - - 0.822 0.964 - - lin-7 homolog B (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-1]
16. fam43b ENSDARG00000070222 92 1.784 - - - - - 0.877 0.907 - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
17. PPP2R2B PPP2R2B 257 1.761 - - - - - - 0.900 0.861 -
18. pou3f2a ENSDARG00000070220 817 1.758 - - - - - 0.842 0.916 - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
19. syt12 ENSDARG00000101776 215 1.749 - - - - - 0.958 0.791 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
20. snap25b ENSDARG00000058117 469 1.748 - - - - - - 0.870 0.878 - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
21. C8H1orf106 C8H1orf106 2690 1.747 - - - - - 0.905 0.842 - -
22. KCNA3 KCNA3 748 1.744 - - - 0.908 - - 0.836 - -
23. prdm8b ENSDARG00000054683, ENSDARG00000112649 270 1.74 - - - - - 0.816 0.924 - - PR domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-060526-174]
24. si:dkey-52l6.2 si:dkey-52l6.2 384 1.731 - - - 0.895 - - - 0.836 -
25. odz4 odz4 822 1.723 - - - - - 0.815 0.908 - -
26. pcdh2ac ENSDARG00000099783 325 1.722 - - - - - 0.850 0.872 - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
27. nrgna ENSDARG00000039626 50 1.71 - - - - - - 0.893 0.817 - neurogranin (protein kinase C substrate, RC3) a [Source:ZFIN;Acc:ZDB-GENE-090710-4]
28. tspan3b ENSDARG00000053559, ENSDARG00000112641 118 1.707 - - - - - 0.848 0.859 - - tetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
29. ephb3a ENSDARG00000031548 1872 1.696 - - - - - 0.853 0.843 - - eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
30. SLC5A6 SLC5A6 179 1.692 0.759 - - 0.933 - - - - -
31. prok1 ENSDARG00000073948, ENSDARG00000114411 26 1.687 - - - - - 0.812 0.875 - - prokineticin 1 [Source:ZFIN;Acc:ZDB-GENE-070928-34]
32. atp6v0a1b ENSDARG00000015174 1052 1.687 - - - - - 0.781 0.906 - - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
33. neurog1 ENSDARG00000056130 3924 1.686 - - - - - 0.925 0.761 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
34. chat chat 463 1.686 - - - - - 0.884 0.802 - -
35. si:ch211-247j9.1 ENSDARG00000079283 217 1.686 - - - - - 0.886 0.800 - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
36. GJD2_1 GJD2_1 3045 1.685 - - - - - 0.836 0.849 - -
37. LRRC4C ENSDARG00000113411 36 1.682 - - - - - - 0.859 0.823 - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
38. col5a3a_1 ENSDARG00000098294 271 1.681 - 0.854 - - - 0.827 - - - collagen, type V, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-030131-968]
39. flrt1b ENSDARG00000075597 465 1.681 - - - - - 0.751 0.930 - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
40. zic2b ENSDARG00000037178, ENSDARG00000112354 993 1.681 - - - - - - 0.840 0.841 - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
41. magi1a ENSDARG00000070145 547 1.676 - - - 0.747 - 0.929 - - - membrane associated guanylate kinase, WW and PDZ domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-081105-13]
42. sox21a ENSDARG00000031664, ENSDARG00000111842 1700 1.676 - - - - - 0.918 0.758 - - SRY (sex determining region Y)-box 21a [Source:ZFIN;Acc:ZDB-GENE-990715-6]
43. hoxb5b ENSDARG00000054030, ENSDARG00000113174 808 1.675 - - - - - 0.788 0.887 - - homeobox B5b [Source:ZFIN;Acc:ZDB-GENE-000823-6]
44. tmem35 ENSDARG00000052567 5685 1.675 - - - - - 0.945 0.730 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
45. AGO1 ENSDARG00000092644 4521 1.674 - - - - - 0.830 0.844 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
46. rab42a ENSDARG00000034215 692 1.67 - - - - - 0.771 - 0.899 - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
47. GADD45G GADD45G 382 1.67 - - - - - 0.872 - 0.798 -
48. her2 ENSDARG00000038205 3219 1.669 - - - - - 0.895 0.774 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
49. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.664 - - - - - 0.875 0.789 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
50. chrm3a ENSDARG00000071091 72 1.663 - - - - - 0.813 0.850 - - cholinergic receptor, muscarinic 3a [Source:ZFIN;Acc:ZDB-GENE-090410-4]
51. hectd2 ENSDARG00000061194 559 1.658 - - - - - 0.879 0.779 - - HECT domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-100405-3]
52. gnai3 ENSDARG00000030644 29 1.658 - 0.848 - - - - - 0.810 - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070713-6]
53. im:7162084 im:7162084 665 1.656 - - - - - 0.883 0.773 - -
54. chrna2b ENSDARG00000057025 217 1.653 - - - - - 0.891 0.762 - - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
55. CHL1 CHL1 1553 1.65 - - - - - 0.800 0.850 - -
56. gdf11 ENSDARG00000044924 534 1.647 - - - - - 0.886 0.761 - - growth differentiation factor 11 [Source:ZFIN;Acc:ZDB-GENE-040427-2]
57. ctnnd2b ENSDARG00000003779 964 1.645 - - - - - 0.869 0.776 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
58. tlx3b ENSDARG00000017615, ENSDARG00000114069 84 1.644 - - - - - 0.817 0.827 - - T cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-021021-1]
59. si:ch73-389b16.2 ENSDARG00000103802 340 1.643 - - - 0.873 - - - 0.770 - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
60. CHRNB4 ENSDARG00000101677 128 1.641 - - - - - 0.751 0.890 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
61. pcdh19 ENSDARG00000034344 2378 1.64 - - - - - 0.849 0.791 - - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
62. arhgap39 ENSDARG00000100007 344 1.638 - - - 0.740 - 0.898 - - - Rho GTPase activating protein 39 [Source:ZFIN;Acc:ZDB-GENE-041014-247]
63. vim ENSDARG00000010008 3551 1.638 - - - - - 0.794 0.844 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
64. hnrnpa3 ENSDARG00000059351 453 1.638 - - - - - 0.758 0.880 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
65. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 1.638 - - - - - 0.852 0.786 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
66. LRIF1_1 LRIF1_1 228 1.633 - - - - - 0.829 - 0.804 -
67. prdm9 ENSDARG00000005382, ENSDARG00000110150 572 1.633 - - - 0.819 - 0.814 - - - PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]
68. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.63 - - - - - 0.841 0.789 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
69. zgc:174178 zgc:174178 104 1.63 - 0.727 - 0.903 - - - - -
70. her4.2 ENSDARG00000056729, ENSDARG00000094426 289 1.628 - - - - - 0.876 0.752 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
71. BX571853.2 ENSDARG00000110441 21 1.627 - - - - - 0.720 0.907 - -
72. BX511121.1 ENSDARG00000029997 1774 1.627 - - - - - 0.884 0.743 - -
73. lhx4 ENSDARG00000039458 328 1.626 - - - - - 0.925 0.701 - - LIM homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060728-1]
74. rheb ENSDARG00000090213 1432 1.625 - - - - - 0.856 0.769 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
75. pou2f2a ENSDARG00000019658, ENSDARG00000036816 2027 1.622 - - - - - 0.735 0.887 - - POU class 2 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-060310-2]
76. prr18 ENSDARG00000093768 409 1.62 - - - - - - - 0.889 0.731 proline rich 18 [Source:ZFIN;Acc:ZDB-GENE-081107-6]
77. syngr3a ENSDARG00000014871 405 1.619 - - - - - 0.767 0.852 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
78. zbtb12.2 ENSDARG00000070658 55 1.618 - 0.883 - - - 0.735 - - - zinc finger and BTB domain containing 12, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-27]
79. msi1 ENSDARG00000010710 2634 1.618 - - - - - 0.847 0.771 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
80. DTX3 DTX3 303 1.616 - - - - - 0.845 - 0.771 -
81. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 1.615 - - - 0.831 - 0.784 - - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
82. fabp7a ENSDARG00000007697 5211 1.615 - - - - - 0.797 0.818 - - fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
83. nell2b ENSDARG00000062797 854 1.612 - - - - - 0.873 0.739 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
84. elavl3 ENSDARG00000014420 8644 1.611 - - - - - 0.877 0.734 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
85. CABZ01029738.1 CABZ01029738.1 327 1.61 - - - - - 0.773 0.837 - -
86. CABZ01111990.1 CABZ01111990.1 4374 1.61 - - - - - 0.875 0.735 - -
87. fyna ENSDARG00000011370 1679 1.609 - - - - - 0.851 0.758 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
88. foxd5 ENSDARG00000042485, ENSDARG00000109712 216 1.608 - - - - - 0.883 0.725 - - forkhead box D5 [Source:ZFIN;Acc:ZDB-GENE-980605-4]
89. zc3h12b ENSDARG00000062463, ENSDARG00000113648 402 1.608 - - - - - 0.766 0.842 - - zinc finger CCCH-type containing 12B [Source:ZFIN;Acc:ZDB-GENE-060526-290]
90. nova2 ENSDARG00000017673 7685 1.607 - - - - - 0.819 0.788 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
91. syngr3b ENSDARG00000025034 290 1.606 - - - - - 0.843 0.763 - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
92. nkx6.2 ENSDARG00000104735 5081 1.603 - - - - - 0.818 0.785 - - NK6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070626-1]
93. baiap2l2 baiap2l2 30 1.603 - 0.848 - - - - 0.755 - -
94. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 1.603 - - - - - 0.710 0.893 - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
95. sox19b ENSDARG00000040266 532 1.602 - - - - - 0.897 0.705 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
96. bcr ENSDARG00000079286 578 1.601 - - - 0.866 - - 0.735 - - breakpoint cluster region [Source:ZFIN;Acc:ZDB-GENE-040724-43]
97. si:dkey-11c5.11 ENSDARG00000096637 130 1.597 - - - 0.849 - - - 0.748 - si:dkey-11c5.11 [Source:ZFIN;Acc:ZDB-GENE-121214-253]
98. gpr124 gpr124 25 1.597 - 0.863 - - - - 0.734 - -
99. FRRS1L ENSDARG00000103940 224 1.596 - - - - - 0.726 0.870 - - ferric-chelate reductase 1-like [Source:ZFIN;Acc:ZDB-GENE-120827-1]
100. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 1.594 - - - - - 0.845 0.749 - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]

There are 1765 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA