Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ap3d1

Gene Name Gene ID Reads Annotation
ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]










Genes with expression patterns similar to ap3d1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
2. sdhb ENSDARG00000075768 5493 2.891 - 0.954 0.960 - - 0.977 - - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
3. hsd17b14 ENSDARG00000054842 1394 2.525 0.738 0.988 - - - - 0.799 - - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
4. PHLDB1 PHLDB1 3821 1.981 - - - - - 0.989 - - 0.992
5. aqr ENSDARG00000016775 1581 1.97 - 0.987 - - - 0.983 - - - aquarius intron-binding spliceosomal factor [Source:ZFIN;Acc:ZDB-GENE-040426-1189]
6. map1lc3b ENSDARG00000101127 3958 1.969 - 0.981 - - - 0.988 - - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
7. si:dkey-9i23.11 si:dkey-9i23.11 3818 1.969 - 0.982 - - - 0.987 - - -
8. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 1.963 - 0.979 - - - 0.984 - - - bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
9. tp53 ENSDARG00000035559, ENSDARG00000115148 4362 1.961 - 0.990 0.971 - - - - - - tumor protein p53 [Source:ZFIN;Acc:ZDB-GENE-990415-270]
10. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.959 - - 0.967 - - - - - 0.992 E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
11. gmppb ENSDARG00000017658 3484 1.959 - 0.976 0.983 - - - - - - GDP-mannose pyrophosphorylase B [Source:ZFIN;Acc:ZDB-GENE-040801-234]
12. irf2bp2a ENSDARG00000004702 6719 1.949 - - - - - 0.989 - - 0.960 interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
13. cry2a cry2a 2728 1.943 - - 0.961 - - 0.982 - - -
14. PELP1 ENSDARG00000079313 5771 1.939 - - 0.964 - - - - - 0.975 proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
15. arcn1b ENSDARG00000031214 4529 1.928 - 0.973 0.955 - - - - - - archain 1b [Source:ZFIN;Acc:ZDB-GENE-040121-7]
16. tpst1 ENSDARG00000073872 2490 1.912 - 0.992 - - - - 0.920 - - tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
17. btbd10b ENSDARG00000020252 7251 1.904 - - - - - - 0.922 - 0.982 BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
18. ovol1 1037 1.899 - 0.987 - - - - 0.912 - - ovo-like zinc finger 1, transcript variant X1
19. padi2 ENSDARG00000044167 6765 1.897 - 0.977 - - - - 0.920 - - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
20. dars ENSDARG00000070043 6854 1.895 - 0.938 - - - 0.957 - - - aspartyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-061110-135]
21. atp6v1aa ENSDARG00000034534, ENSDARG00000113437 1443 1.894 - 0.904 - - - 0.990 - - - ATPase H+ transporting V1 subunit Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1143]
22. dsg2 dsg2 4039 1.867 - - - - - 0.980 0.887 - -
23. ube2e2 ENSDARG00000034670 5918 1.862 - 0.988 0.874 - - - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
24. aqp3a ENSDARG00000003808 9044 1.849 - 0.980 - - - - 0.869 - - aquaporin 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2826]
25. ccm2 ENSDARG00000013705 3464 1.845 - 0.969 - - - - - - 0.876 CCM2 scaffold protein [Source:ZFIN;Acc:ZDB-GENE-040712-6]
26. dennd2da ENSDARG00000058666 1780 1.834 - - - - - 0.992 0.842 - - DENN/MADD domain containing 2Da [Source:ZFIN;Acc:ZDB-GENE-061013-542]
27. perp ENSDARG00000063572 6423 1.831 - - - - - 0.935 0.896 - - PERP, TP53 apoptosis effector [Source:ZFIN;Acc:ZDB-GENE-050104-1]
28. CABZ01007794.1 CABZ01007794.1 14290 1.817 - - - - - - 0.855 - 0.962
29. itgb1b.1 ENSDARG00000053232 4721 1.813 - - 0.966 - - - 0.847 - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
30. slc1a5 ENSDARG00000099186 7580 1.811 - 0.991 - - - - 0.820 - - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
31. AL929434.1 AL929434.1 3294 1.796 - - - - - 0.989 0.807 - -
32. rgs12b ENSDARG00000036774 5088 1.794 - 0.981 - - - - 0.813 - - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
33. HNRNPA2B1 HNRNPA2B1 14997 1.793 - - 0.835 - - 0.958 - - -
34. mtpn ENSDARG00000104018 4264 1.787 - 0.982 - - - - 0.805 - - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
35. cd2ap ENSDARG00000015224 2830 1.782 - 0.985 - - - - 0.797 - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
36. ube2l3a ENSDARG00000110975, ENSDARG00000112087 2899 1.776 - - - - - 0.971 0.805 - - ubiquitin-conjugating enzyme E2L 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2977]
37. COL7A1 ENSDARG00000021720 2210 1.77 0.802 0.968 - - - - - - - collagen, type VII, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2427]
38. ptplb ptplb 6135 1.77 - - - - - - 0.781 - 0.989
39. TCEB3 2429 1.766 - - 0.972 - - - 0.794 - - transcription elongation factor B (SIII), polypeptide 3
40. slc25a17 ENSDARG00000061684, ENSDARG00000116998 820 1.751 0.763 0.988 - - - - - - - solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein), member 17 [Source:ZFIN;Acc:ZDB-GENE-070620-4]
41. arpc1a ENSDARG00000008383 7353 1.75 - - - - - - 0.762 - 0.988 actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
42. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 1.749 - - 0.819 - - 0.930 - - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
43. USO1 ENSDARG00000019581 1617 1.746 - 0.969 - - - - 0.777 - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
44. capn2b ENSDARG00000055592 5431 1.743 - 0.986 - - - - 0.757 - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
45. pafah1b3 ENSDARG00000058047, ENSDARG00000105336, ENSDARG00000116495 8019 1.741 - - 0.859 - - - 0.882 - - platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1026]
46. TRIM35_10 TRIM35_10 484 1.74 - - 0.971 - - - 0.769 - -
47. appl1 1019 1.739 - 0.984 - - - - 0.755 - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
48. lamtor2 ENSDARG00000039872 3250 1.738 - 0.980 - - - - 0.758 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-63]
49. PCOLCE_1 PCOLCE_1 2148 1.738 - - - - - - 0.783 - 0.955
50. GABARAPL3 GABARAPL3 1198 1.738 - 0.988 - - - - 0.750 - -
51. si:dkey-193c22.2 ENSDARG00000076735 2791 1.738 - - 0.961 - - - 0.777 - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
52. atp6v1h ENSDARG00000006370 7028 1.738 - - - - - - 0.761 - 0.977 ATPase H+ transporting V1 subunit H [Source:ZFIN;Acc:ZDB-GENE-021219-2]
53. egfra ENSDARG00000013847 2912 1.735 - - - - - 0.987 0.748 - - epidermal growth factor receptor a (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) [Source:ZFIN;Acc:ZDB-GENE-030918-1]
54. tmx2b ENSDARG00000007786 3151 1.734 - - - - - 0.989 0.745 - - thioredoxin-related transmembrane protein 2b [Source:ZFIN;Acc:ZDB-GENE-040625-105]
55. sepw1 17630 1.734 - - 0.818 - - - 0.916 - - selenoprotein W, 1
56. SH3D21 ENSDARG00000099448 1726 1.733 - 0.990 - - - - 0.743 - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
57. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 26947 1.732 - - - - - 0.971 0.761 - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
58. eppk1 ENSDARG00000096359 4315 1.731 - - 0.961 - - - 0.770 - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
59. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 1.719 - - 0.971 - - - 0.748 - - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
60. gabarapl2 ENSDARG00000027200 5120 1.719 - - 0.963 - - - 0.756 - - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
61. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.719 - - 0.945 - - - 0.774 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
62. tmem176l.4 ENSDARG00000074390 1886 1.716 - 0.953 - - - - 0.763 - - transmembrane protein 176l.4 [Source:ZFIN;Acc:ZDB-GENE-030131-3532]
63. azi2 ENSDARG00000102419 1380 1.714 - - - - - - 0.722 - 0.992 5-azacytidine induced 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2097]
64. atp6ap1b ENSDARG00000037153 3970 1.713 0.752 0.961 - - - - - - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
65. lsm14aa ENSDARG00000006600 2298 1.712 - - 0.965 - - - 0.747 - - LSM14A mRNA processing body assembly factor a [Source:ZFIN;Acc:ZDB-GENE-040426-1567]
66. mis18a ENSDARG00000035333 555 1.709 - 0.982 - - - - 0.727 - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
67. sdr16c5a ENSDARG00000016233 2413 1.705 - - - - - 0.985 0.720 - - short chain dehydrogenase/reductase family 16C, member 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2049]
68. GOLM1 GOLM1 1845 1.705 - - - - - 0.991 0.714 - -
69. TMEM87A TMEM87A 2407 1.705 - - - - - - 0.714 - 0.991
70. esrp1 ENSDARG00000011245 2097 1.704 - 0.970 - - - - 0.734 - - epithelial splicing regulatory protein 1 [Source:ZFIN;Acc:ZDB-GENE-070112-1732]
71. tfap2a ENSDARG00000059279 3741 1.7 - - 0.965 - - - 0.735 - - transcription factor AP-2 alpha [Source:ZFIN;Acc:ZDB-GENE-011212-6]
72. ptbp3 ENSDARG00000043757 6760 1.699 - 0.987 - - - - 0.712 - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
73. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 1.696 - - 0.953 - - - 0.743 - - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
74. fryl ENSDARG00000040001 3256 1.695 - - 0.973 - - - 0.722 - - furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
75. C19H18orf21_1 C19H18orf21_1 1657 1.695 - - - - - 0.987 0.708 - -
76. vamp8 ENSDARG00000024116, ENSDARG00000114304 2747 1.694 - - - - - - 0.717 - 0.977 vesicle-associated membrane protein 8 (endobrevin) [Source:ZFIN;Acc:ZDB-GENE-030131-5215]
77. ACVR1B ACVR1B 4824 1.691 - - 0.959 - - - 0.732 - -
78. sar1b ENSDARG00000103403 1699 1.69 - 0.970 - - - - 0.720 - - secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
79. si:dkey-253d23.10 7602 1.684 - - 0.951 - - - 0.733 - - si:dkey-253d23.10, transcript variant X4
80. neu1 ENSDARG00000008832 2848 1.684 - - 0.972 - - - 0.712 - - neuraminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-592]
81. anxa1a ENSDARG00000026726 23173 1.68 - 0.803 - - - - 0.877 - - annexin A1a [Source:ZFIN;Acc:ZDB-GENE-030131-6664]
82. tmed1a ENSDARG00000031325 1936 1.677 - 0.936 - - - - 0.741 - - transmembrane p24 trafficking protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-229]
83. OMG OMG 1202 1.676 - 0.960 - - - - 0.716 - -
84. rpe ENSDARG00000005251, ENSDARG00000117024 3865 1.669 - 0.914 - - - - 0.755 - - ribulose-5-phosphate-3-epimerase [Source:ZFIN;Acc:ZDB-GENE-030131-6837]
85. gm2a ENSDARG00000088439 5387 1.668 - - 0.961 - - - 0.707 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
86. vimp 4034 1.662 - 0.953 - - - - 0.709 - - VCP-interacting membrane selenoprotein
87. ptp4a1 ENSDARG00000006242 10267 1.661 - 0.726 - - - 0.935 - - - protein tyrosine phosphatase type IVA, member 1 [Source:ZFIN;Acc:ZDB-GENE-041121-11]
88. slc25a1b ENSDARG00000076381 6213 1.605 - 0.798 - - - - 0.807 - - slc25a1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-130114-1]
89. ndfip1 ENSDARG00000013979, ENSDARG00000111470, ENSDARG00000112351 2550 1.588 0.803 - - - - - 0.785 - - Nedd4 family interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2767]
90. sec23b ENSDARG00000019360 6210 1.576 - - - - - 0.773 0.803 - - Sec23 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-5479]
91. mpdu1a ENSDARG00000035562, ENSDARG00000109966 1169 1.572 0.792 - - - - - 0.780 - - mannose-P-dolichol utilization defect 1a [Source:ZFIN;Acc:ZDB-GENE-040912-9]
92. nedd8 ENSDARG00000007989 3896 1.565 - - 0.862 - - - 0.703 - - neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
93. si:dkeyp-13a3.10 ENSDARG00000092225 1054 1.565 0.757 - - - - - 0.808 - - si:dkeyp-13a3.10 [Source:ZFIN;Acc:ZDB-GENE-070912-636]
94. sf3b1 ENSDARG00000056138 5785 1.564 - - 0.851 - - - 0.713 - - splicing factor 3b, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040827-3]
95. si:dkey-246i14.3 ENSDARG00000090427 365 1.56 0.769 - - - - - 0.791 - - si:dkey-246i14.3 [Source:ZFIN;Acc:ZDB-GENE-100922-64]
96. abca12 ENSDARG00000074749 2712 1.549 0.709 - - - - - 0.840 - - ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]
97. si:ch211-251f6.6 ENSDARG00000053448 323 1.547 0.761 - - - - - 0.786 - - si:ch211-251f6.6 [Source:ZFIN;Acc:ZDB-GENE-030131-3219]
98. myh9a ENSDARG00000063295 27935 1.543 - - 0.714 - - - 0.829 - - myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
99. capn2l ENSDARG00000034211, ENSDARG00000111153 3858 1.542 - - - - - 0.744 0.798 - - calpain 2, (m/II) large subunit, like [Source:ZFIN;Acc:ZDB-GENE-050417-341]
100. capn9 ENSDARG00000012341 12911 1.532 - - - - - 0.820 0.712 - - calpain 9 [Source:ZFIN;Acc:ZDB-GENE-010724-2]

There are 1242 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA