Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for amph

Gene Name Gene ID Reads Annotation
amph ENSDARG00000007663 599 amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]










Genes with expression patterns similar to amph

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. amph ENSDARG00000007663 599 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
2. pax6a ENSDARG00000103379 3061 4.103 0.728 0.792 - - - 0.868 0.990 0.725 - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
3. si:ch211-11c15.3 si:ch211-11c15.3 1279 4.093 0.768 0.751 - - - 0.896 0.973 0.705 -
4. CLIP3 ENSDARG00000054456 734 3.928 0.797 0.710 - - - 0.816 0.864 0.741 - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
5. scrt2 ENSDARG00000056175 4331 3.859 0.933 0.976 - - - 0.963 0.987 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
6. SV2B SV2B 208 3.786 0.887 1.000 - - - 0.972 0.927 - -
7. snap25a ENSDARG00000020609 4537 3.774 0.964 0.945 - - - 0.923 0.942 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
8. stx1b ENSDARG00000000503 2724 3.733 0.892 0.918 - - - 0.939 0.984 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
9. stmn2a ENSDARG00000033234 2272 3.72 0.953 0.900 - - - 0.907 0.960 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
10. MAP1A MAP1A 847 3.702 0.853 0.967 - - - 0.922 0.960 - -
11. TUSC5 TUSC5 1436 3.688 0.934 0.868 - - - 0.907 0.979 - -
12. slc1a2b ENSDARG00000102453 3136 3.663 0.914 0.897 - - - 0.878 0.974 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
13. lhx1a ENSDARG00000014018 958 3.619 0.889 0.939 - - - 0.856 0.935 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
14. gap43 ENSDARG00000099744 4114 3.614 0.968 0.815 - - - 0.894 0.937 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
15. fam219ab ENSDARG00000013813 591 3.611 - 0.909 - - - 0.940 0.919 0.843 - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
16. scn8aa ENSDARG00000005775 792 3.61 0.882 0.876 - - - 0.868 0.984 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
17. slc32a1 ENSDARG00000059775 1092 3.591 0.870 0.861 - - - 0.882 0.978 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
18. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.572 0.951 0.802 - - - 0.877 0.942 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
19. cadm3 ENSDARG00000057013 1545 3.569 0.876 0.821 - - - 0.925 0.947 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
20. nova2 ENSDARG00000017673 7685 3.563 0.871 0.895 - - - 0.863 0.934 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
21. mapk12b ENSDARG00000006409 2246 3.562 0.903 0.791 - - - 0.899 0.969 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
22. rbfox3 rbfox3 1443 3.551 0.912 0.854 - - - 0.797 0.988 - -
23. sez6l2 ENSDARG00000076052 360 3.545 0.750 0.940 - - - 0.916 0.939 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
24. syt11a ENSDARG00000057913 1145 3.545 0.865 0.936 - - - 0.863 0.881 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
25. fez1 ENSDARG00000023174 701 3.533 0.854 - - - - 0.953 0.953 0.773 - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
26. adam23a ENSDARG00000062323 580 3.51 0.881 0.861 - - - 0.936 0.832 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
27. slc17a6b ENSDARG00000041150 823 3.501 0.761 0.909 - - - 0.868 0.963 - - solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
28. TUBB8P7_1 TUBB8P7_1 2722 3.484 0.925 0.731 - - - 0.932 0.896 - -
29. gng3 ENSDARG00000009553 2530 3.471 0.862 0.957 - - - 0.702 0.950 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
30. rap2ip rap2ip 681 3.457 - 0.940 - - - 0.919 0.877 0.721 -
31. vsnl1a ENSDARG00000023228 1584 3.456 0.815 0.849 - - - 0.901 0.891 - - visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
32. calb1 ENSDARG00000031598 252 3.451 0.803 0.909 - - - 0.867 0.872 - - calbindin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8107]
33. si:ch73-21g5.7 ENSDARG00000093156 9412 3.449 0.780 0.875 - - - 0.840 0.954 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
34. MAP6 MAP6 643 3.448 0.905 0.936 - - - 0.721 0.886 - -
35. pcdh1gc5 ENSDARG00000104826 10052 3.441 0.833 0.766 - - - 0.924 0.918 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
36. jag1a ENSDARG00000030289 1275 3.434 0.814 0.890 - - - 0.799 0.931 - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
37. nrxn2a ENSDARG00000061454 291 3.434 0.855 0.791 - - - 0.876 0.912 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
38. pcsk1nl ENSDARG00000076170 1232 3.426 0.763 0.896 - - - 0.845 0.922 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
39. nadl1.1 1200 3.424 0.851 0.855 - - - 0.813 0.905 - - neural adhesion molecule L1.1, transcript variant X1
40. mllt11 ENSDARG00000071026 2518 3.422 0.920 - - - - 0.924 0.873 0.705 - MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
41. nes ENSDARG00000088805 2710 3.419 0.854 0.952 - - - 0.725 0.888 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
42. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 3.395 0.739 - - - - 0.851 0.983 0.822 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
43. rtn1b ENSDARG00000021143 1682 3.375 0.790 0.821 - - - 0.920 0.844 - - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
44. TUBB2A TUBB2A 142 3.374 0.776 0.909 - - - 0.931 0.758 - -
45. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 3.368 0.801 0.749 - - - 0.959 0.859 - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
46. her3 ENSDARG00000076857 131 3.367 0.774 0.909 - - - 0.820 0.864 - - hairy-related 3 [Source:ZFIN;Acc:ZDB-GENE-980526-204]
47. sox2 ENSDARG00000070913 2763 3.357 0.876 0.887 - - - 0.724 0.870 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
48. C7H4orf48 C7H4orf48 1455 3.352 0.818 - - - - 0.935 0.826 0.773 -
49. zic4 ENSDARG00000031307 1228 3.346 0.852 0.848 - - - 0.884 0.762 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
50. st18 663 3.346 - 0.859 - - - 0.920 0.844 0.723 - suppression of tumorigenicity 18, zinc finger
51. UBE2QL1 ENSDARG00000079276 3474 3.335 0.867 - - - - 0.861 0.907 0.700 - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
52. atp2b3b ENSDARG00000023445 1424 3.332 0.852 0.802 - - - 0.853 0.825 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
53. zic1 ENSDARG00000015567 2520 3.33 0.938 0.708 - - - 0.888 0.796 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
54. ZFHX3 ENSDARG00000103057 7759 3.325 0.859 - - - - 0.823 0.917 0.726 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
55. myt1b ENSDARG00000102879 5411 3.296 0.704 0.756 - - - 0.889 0.947 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
56. fgf13b ENSDARG00000056633 455 3.295 0.816 - - - - 0.837 0.917 0.725 - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
57. nptx1l ENSDARG00000074671 569 3.288 0.719 0.882 - - - 0.852 0.835 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
58. add2 ENSDARG00000074581 1402 3.287 0.750 - - - - 0.858 0.883 0.796 - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
59. nbeaa ENSDARG00000070080 862 3.282 0.866 - - - - 0.714 0.984 0.718 - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
60. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 3.253 0.719 - - - - 0.885 0.861 0.788 - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
61. neurog1 ENSDARG00000056130 3924 3.24 0.824 0.754 - - - 0.709 0.953 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
62. hmp19 2554 3.218 0.785 - - - - 0.841 0.888 0.704 - HMP19 protein
63. slc35g2b ENSDARG00000045447 378 3.209 0.755 0.849 - - - 0.735 0.870 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
64. tnika ENSDARG00000056218 728 3.204 0.849 0.728 - - - 0.835 0.792 - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
65. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 3.194 0.706 0.717 - - - 0.824 0.947 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
66. dpysl4 ENSDARG00000103490 534 3.145 0.730 - - - - 0.703 0.946 0.766 - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
67. entpd3 ENSDARG00000035309 263 3.143 0.752 0.804 - - - 0.723 0.864 - - ectonucleoside triphosphate diphosphohydrolase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6186]
68. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 3.137 - 0.853 - - - 0.703 0.856 0.725 - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
69. lgi1a ENSDARG00000020493 1218 3.136 0.800 0.777 - - - 0.830 0.729 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
70. prph ENSDARG00000028306 242 3.118 0.746 0.788 - - - 0.736 0.848 - - peripherin [Source:ZFIN;Acc:ZDB-GENE-990415-207]
71. fam60al 2846 3.117 0.725 - - - - 0.819 0.838 0.735 - family with sequence similarity 60, member A, like
72. TUBB8P7 TUBB8P7 1353 3.106 0.852 0.803 - 0.725 - 0.726 - - -
73. rufy3 ENSDARG00000029692 3031 3.089 0.839 0.733 - - - 0.707 0.810 - - RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
74. sox19b ENSDARG00000040266 532 3.083 0.719 0.768 - - - 0.704 0.892 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
75. ccdc28b ENSDARG00000011222 528 3.024 0.753 - - - - 0.706 0.854 0.711 - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
76. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 2.835 0.978 - - - - 0.889 0.968 - - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
77. atp2b3a ENSDARG00000043474, ENSDARG00000112865 914 2.834 0.875 - - - - 0.974 0.985 - - ATPase plasma membrane Ca2+ transporting 3a [Source:ZFIN;Acc:ZDB-GENE-040718-174]
78. rab3ab ENSDARG00000043835 1267 2.829 0.909 - - - - 0.953 0.967 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
79. tuba1c ENSDARG00000055216 8384 2.814 0.942 - - - - 0.906 0.966 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
80. stmn4l ENSDARG00000043932 654 2.805 0.875 - - - - 0.977 0.953 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
81. gfap ENSDARG00000025301 5584 2.799 0.884 - - - - 0.942 0.973 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
82. sv2bb ENSDARG00000060711 196 2.797 0.842 0.985 - - - - 0.970 - - synaptic vesicle glycoprotein 2Bb [Source:ZFIN;Acc:ZDB-GENE-030131-2789]
83. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 2.775 0.870 - - - - 0.980 0.925 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
84. stmn1b ENSDARG00000033655 9491 2.759 0.922 - - - - 0.885 0.952 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
85. plp1a ENSDARG00000103732 3544 2.759 0.941 - - - - 0.900 0.918 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
86. scn2b ENSDARG00000101713 796 2.755 0.830 1.000 - - - - 0.925 - - sodium channel, voltage-gated, type II, beta [Source:ZFIN;Acc:ZDB-GENE-070920-1]
87. dbx2 2971 2.751 0.853 0.925 - - - - 0.973 - - developing brain homeobox 2
88. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 2.75 - 0.904 - - - 0.955 0.891 - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
89. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.745 0.855 - - - - 0.909 0.981 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
90. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 2.74 0.857 1.000 - - - 0.883 - - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
91. dpysl3 ENSDARG00000002587 4381 2.731 0.951 - - - - 0.827 0.953 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
92. si:ch211-152f6.6 si:ch211-152f6.6 278 2.73 0.850 0.959 - - - - 0.921 - -
93. lhx5 ENSDARG00000057936 785 2.727 0.915 - - - - 0.891 0.921 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
94. GLRA3 ENSDARG00000011066 242 2.723 0.856 0.899 - - - - 0.968 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
95. STMN3 ENSDARG00000038465 1009 2.721 0.917 - - - - 0.822 0.982 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
96. slc6a5_1 ENSDARG00000067964, ENSDARG00000111378 1111 2.72 0.846 - - - - 0.923 0.951 - - solute carrier family 6 (neurotransmitter transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-050105-2]
97. MAPK8IP1_1 MAPK8IP1_1 186 2.72 0.968 - - - - 0.846 0.906 - -
98. prrt1 ENSDARG00000062208 368 2.715 0.967 - - - - 0.858 0.890 - - proline-rich transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-686]
99. MCTP1 MCTP1 219 2.71 0.792 0.986 - - - 0.932 - - -
100. stxbp1a ENSDARG00000001994 5154 2.709 - 0.836 - - - 0.942 0.931 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]

There are 2165 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA