Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ampd3a

Gene Name Gene ID Reads Annotation
ampd3a ENSDARG00000005800 498 adenosine monophosphate deaminase 3a [Source:ZFIN;Acc:ZDB-GENE-110407-2]










Genes with expression patterns similar to ampd3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ampd3a ENSDARG00000005800 498 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 adenosine monophosphate deaminase 3a [Source:ZFIN;Acc:ZDB-GENE-110407-2]
2. COQ7 ENSDARG00000062594 989 1.567 - - - - - 0.819 0.748 - - coenzyme Q7 homolog, ubiquinone (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-262]
3. CABZ01086825.1 CABZ01086825.1 573 1.555 - - - - - - 0.797 0.758 -
4. CR792456.1 CR792456.1 783 1.555 - - - - - 0.727 0.828 - -
5. mlh1 ENSDARG00000025948 130 1.528 - - 0.745 - - - - 0.783 - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
6. zgc:174895 ENSDARG00000079416, ENSDARG00000113559 451 1.516 - - - - - 0.751 - 0.765 - zgc:174895 [Source:ZFIN;Acc:ZDB-GENE-070928-41]
7. PITPNC1 ENSDARG00000099260 1096 1.51 - - - - - 0.725 0.785 - - phosphatidylinositol transfer protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:21045]
8. ryr3 ENSDARG00000071331 6795 1.509 0.739 - - - - - 0.770 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
9. si:ch211-152c2.3 ENSDARG00000045898 3448 1.502 - - - - - 0.774 0.728 - - si:ch211-152c2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9914]
10. osbpl2a ENSDARG00000053804 1883 1.501 - 0.755 - - - - 0.746 - - oxysterol binding protein-like 2a [Source:ZFIN;Acc:ZDB-GENE-091116-46]
11. STIM2 STIM2 644 1.474 - - - - - - 0.704 0.770 -
12. fbp2 ENSDARG00000012366 1042 1.47 - - - - - 0.705 0.765 - - fructose-1,6-bisphosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-23]
13. asns ENSDARG00000016375 1606 1.47 - 0.731 - - - - - 0.739 - asparagine synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-1091]
14. TTBK2 TTBK2 303 1.465 - 0.708 - - - - - 0.757 -
15. ror2 ENSDARG00000076227, ENSDARG00000116710 1498 1.457 - - - - - - 0.724 0.733 - receptor tyrosine kinase-like orphan receptor 2 [Source:ZFIN;Acc:ZDB-GENE-060427-5]
16. CU467854.2 CU467854.2 298 1.454 - - - - - 0.702 0.752 - -
17. flncb ENSDARG00000018820 5595 1.45 - - - - - 0.718 0.732 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
18. sertad2a ENSDARG00000093412 503 1.443 - - - - - 0.705 - 0.738 - SERTA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050309-236]
19. MRVI1 ENSDARG00000074602 443 1.439 - 0.706 - - - - - 0.733 - murine retrovirus integration site 1 homolog [Source:ZFIN;Acc:ZDB-GENE-120221-4]
20. kcnma1a ENSDARG00000079840 2584 1.438 - - - - - 0.728 0.710 - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
21. col5a3a_1 ENSDARG00000098294 271 1.426 - - - - - 0.706 0.720 - - collagen, type V, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-030131-968]
22. agla ENSDARG00000103811 2856 1.425 - - - - - 0.707 0.718 - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a [Source:ZFIN;Acc:ZDB-GENE-071004-6]
23. enpp1 ENSDARG00000005789 3267 1.42 - - - - - - 0.702 0.718 - ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-172]
24. jph1a ENSDARG00000058603 2852 1.414 - - - - - 0.704 0.710 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
25. zdhhc8a ENSDARG00000042872 306 0.981 - - - - - - - 0.981 - zinc finger, DHHC-type containing 8a [Source:ZFIN;Acc:ZDB-GENE-091118-26]
26. NUP54 ENSDARG00000103296 433 0.96 - - - - - - - 0.960 - nucleoporin 54 [Source:ZFIN;Acc:ZDB-GENE-040426-2263]
27. tspan18a ENSDARG00000056656 530 0.944 - - - - - - - 0.944 - tetraspanin 18a [Source:ZFIN;Acc:ZDB-GENE-040718-232]
28. prkx ENSDARG00000060716 530 0.926 - - - - - - - 0.926 - protein kinase X-linked [Source:ZFIN;Acc:ZDB-GENE-090313-408]
29. FBXO33 ENSDARG00000075400 1164 0.923 - - - - - - - 0.923 - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
30. klhl18 ENSDARG00000004306 448 0.899 - - - - - - - 0.899 - kelch-like family member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5785]
31. her8a ENSDARG00000016363 996 0.898 - - - - - - - 0.898 - hairy-related 8a [Source:ZFIN;Acc:ZDB-GENE-030131-2376]
32. si:dkey-18f7.2 si:dkey-18f7.2 895 0.888 - - - - - - - 0.888 -
33. fbxo8 ENSDARG00000007477 603 0.887 - 0.887 - - - - - - - F-box protein 8 [Source:ZFIN;Acc:ZDB-GENE-060421-7091]
34. CU019652.1 CU019652.1 665 0.887 - - - - - - - 0.887 -
35. fus ENSDARG00000037968, ENSDARG00000113554, ENSDARG00000114284 4319 0.885 - 0.885 - - - - - - - FUS RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1010]
36. itpkca ENSDARG00000002994 710 0.882 - 0.882 - - - - - - - inositol-trisphosphate 3-kinase Ca [Source:ZFIN;Acc:ZDB-GENE-030131-6009]
37. CR774184.1 ENSDARG00000096891 404 0.879 - 0.879 - - - - - - -
38. cyp2y3 ENSDARG00000068493, ENSDARG00000101423 3119 0.875 - - - - - - - 0.875 - cytochrome P450, family 2, subfamily Y, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-050522-490]
39. sap130b ENSDARG00000079352 1468 0.873 - 0.873 - - - - - - - Sin3A-associated protein b [Source:ZFIN;Acc:ZDB-GENE-070912-570]
40. paip1 ENSDARG00000042892 902 0.872 - 0.872 - - - - - - - poly(A) binding protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-247]
41. TSPAN4 TSPAN4 941 0.87 - - - - - - - 0.870 -
42. si:dkey-33c12.3 ENSDARG00000057881, ENSDARG00000110707 394 0.86 - - - - - - - 0.860 - si:dkey-33c12.3 [Source:ZFIN;Acc:ZDB-GENE-030131-7320]
43. nr1h3 ENSDARG00000098439 859 0.856 - 0.856 - - - - - - - nuclear receptor subfamily 1, group H, member 3 [Source:ZFIN;Acc:ZDB-GENE-050410-7]
44. CPLX1 CPLX1 386 0.856 - - - - - - - 0.856 -
45. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 0.855 - 0.855 - - - - - - - zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
46. sccpdhb ENSDARG00000024564 707 0.853 - - - - - - - 0.853 - saccharopine dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-041010-211]
47. zgc:165653 ENSDARG00000104713 1603 0.85 - - - - - - - 0.850 - zgc:165653 [Source:ZFIN;Acc:ZDB-GENE-070620-24]
48. tuft1a ENSDARG00000061242, ENSDARG00000115368 330 0.849 - 0.849 - - - - - - - tuftelin 1a [Source:ZFIN;Acc:ZDB-GENE-061103-184]
49. ccdc80l2 ENSDARG00000044695 150 0.849 - 0.849 - - - - - - - coiled-coil domain containing 80 like 2 [Source:ZFIN;Acc:ZDB-GENE-091118-63]
50. apeh ENSDARG00000008703 694 0.846 - 0.846 - - - - - - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
51. nupl1 nupl1 1100 0.845 - - - - - - - 0.845 -
52. ykt6 ENSDARG00000038308 473 0.843 - - - - - - 0.843 - - YKT6 v-SNARE homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-733]
53. mrpl15 ENSDARG00000101306 2796 0.843 - - - - - - - 0.843 - mitochondrial ribosomal protein L15 [Source:ZFIN;Acc:ZDB-GENE-040801-168]
54. srgap1 srgap1 2320 0.843 - 0.843 - - - - - - -
55. zzz3 ENSDARG00000077581 1343 0.84 - - - - - - - 0.840 - zinc finger, ZZ-type containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6450]
56. si:ch211-10d23.5 ENSDARG00000095510 2632 0.84 - - - - - - - 0.840 - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
57. PARP8 ENSDARG00000059789 264 0.84 - 0.840 - - - - - - - poly (ADP-ribose) polymerase family, member 8 [Source:ZFIN;Acc:ZDB-GENE-060929-432]
58. stag1b ENSDARG00000062137 1814 0.839 - - - - - 0.839 - - - stromal antigen 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1393]
59. nos1apa ENSDARG00000078725, ENSDARG00000105071 3815 0.836 - - - - - - - 0.836 - nitric oxide synthase 1 (neuronal) adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-081024-1]
60. SLC22A23 ENSDARG00000078856 2921 0.829 - - - - - - - 0.829 - solute carrier family 22, member 23 [Source:ZFIN;Acc:ZDB-GENE-030131-3564]
61. kdm6a ENSDARG00000061759 1154 0.828 - 0.828 - - - - - - - lysine (K)-specific demethylase 6A [Source:ZFIN;Acc:ZDB-GENE-081105-56]
62. tmem245 ENSDARG00000070455 264 0.827 - 0.827 - - - - - - - transmembrane protein 245 [Source:ZFIN;Acc:ZDB-GENE-100922-188]
63. peli2 ENSDARG00000029045 844 0.826 - 0.826 - - - - - - - pellino E3 ubiquitin protein ligase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-360]
64. fam210a fam210a 348 0.825 - - - - - - 0.825 - -
65. atf7b ENSDARG00000055481, ENSDARG00000114492, ENSDARG00000115171 2249 0.815 - 0.815 - - - - - - - activating transcription factor 7b [Source:ZFIN;Acc:ZDB-GENE-030131-3028]
66. wnt11 ENSDARG00000004256, ENSDARG00000115343 331 0.814 - - - - - - 0.814 - - wingless-type MMTV integration site family, member 11 [Source:ZFIN;Acc:ZDB-GENE-990603-12]
67. tpt1 ENSDARG00000092693 1110 0.813 - - - - - - - 0.813 - tumor protein, translationally-controlled 1 [Source:ZFIN;Acc:ZDB-GENE-990603-10]
68. kat8 ENSDARG00000027187, ENSDARG00000110821, ENSDARG00000111825 1110 0.812 - 0.812 - - - - - - - K(lysine) acetyltransferase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-7510]
69. itga1 ENSDARG00000074316, ENSDARG00000116602 610 0.811 - 0.811 - - - - - - - integrin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-091118-115]
70. mst1ra ENSDARG00000060235 78 0.81 - 0.810 - - - - - - - macrophage stimulating 1 receptor a [Source:ZFIN;Acc:ZDB-GENE-071218-2]
71. zc2hc1a ENSDARG00000027915, ENSDARG00000112745 974 0.81 - 0.810 - - - - - - - zinc finger, C2HC-type containing 1A [Source:ZFIN;Acc:ZDB-GENE-030131-3132]
72. fam73a 336 0.809 - - - - - 0.809 - - - family with sequence similarity 73, member A, transcript variant X1
73. etv2 ENSDARG00000053868 715 0.807 - 0.807 - - - - - - - ets variant 2 [Source:ZFIN;Acc:ZDB-GENE-050622-14]
74. tmem183a ENSDARG00000044899 491 0.806 - 0.806 - - - - - - - transmembrane protein 183A [Source:ZFIN;Acc:ZDB-GENE-050327-5]
75. DUSP23_1 DUSP23_1 1085 0.806 - - - - - - - 0.806 -
76. PICK1 ENSDARG00000071152 995 0.805 - 0.805 - - - - - - - protein interacting with prkca 1 [Source:ZFIN;Acc:ZDB-GENE-061013-283]
77. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 0.804 - - - - - 0.804 - - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
78. alkbh8 ENSDARG00000060256 102 0.802 0.802 - - - - - - - - alkB homolog 8, tRNA methyltransferase [Source:ZFIN;Acc:ZDB-GENE-100922-251]
79. usf1l ENSDARG00000014463, ENSDARG00000109684, ENSDARG00000114279 1581 0.801 - - - - - - - 0.801 - upstream transcription factor 1, like [Source:ZFIN;Acc:ZDB-GENE-040426-2269]
80. zgc:63831 ENSDARG00000009313 895 0.801 - - - - - - - 0.801 - zgc:63831 [Source:ZFIN;Acc:ZDB-GENE-030131-8690]
81. cacnb1 ENSDARG00000002167 1402 0.8 - - - - - - 0.800 - - calcium channel, voltage-dependent, beta 1 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-399]
82. spsb4a ENSDARG00000016084, ENSDARG00000116235 544 0.8 - - 0.800 - - - - - - splA/ryanodine receptor domain and SOCS box containing 4a [Source:ZFIN;Acc:ZDB-GENE-070911-3]
83. itga3b ENSDARG00000012824 1872 0.799 - 0.799 - - - - - - - integrin, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-050411-55]
84. tomm40l ENSDARG00000036721 1714 0.799 0.799 - - - - - - - - translocase of outer mitochondrial membrane 40 homolog, like [Source:ZFIN;Acc:ZDB-GENE-040426-2319]
85. klhl21 ENSDARG00000039255 2550 0.798 - - - - - - 0.798 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
86. CABZ01090021.1 CABZ01090021.1 655 0.798 - - - - - - 0.798 - -
87. rltpr 258 0.798 - - - - - - 0.798 - - RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
88. zfx ENSDARG00000074453 453 0.797 - - - - - - 0.797 - - zinc finger protein X-linked [Source:ZFIN;Acc:ZDB-GENE-061220-2]
89. CABZ01018247.1 CABZ01018247.1 609 0.797 - 0.797 - - - - - - -
90. pi15a ENSDARG00000045378 2361 0.797 - - - - - - 0.797 - - peptidase inhibitor 15a [Source:ZFIN;Acc:ZDB-GENE-040724-135]
91. bloc1s4 ENSDARG00000007597 365 0.796 - 0.796 - - - - - - - biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino [Source:ZFIN;Acc:ZDB-GENE-040801-215]
92. metap1d ENSDARG00000019715, ENSDARG00000112086 236 0.796 - 0.796 - - - - - - - methionyl aminopeptidase type 1D (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-050522-71]
93. nup153 ENSDARG00000099972 1462 0.796 - 0.796 - - - - - - - nucleoporin 153 [Source:ZFIN;Acc:ZDB-GENE-030131-4581]
94. gcdhl gcdhl 38 0.795 - - - - - - - 0.795 -
95. tmem120a ENSDARG00000030914 273 0.795 0.795 - - - - - - - - transmembrane protein 120A [Source:ZFIN;Acc:ZDB-GENE-070424-21]
96. si:ch211-106h4.9 ENSDARG00000075706 36 0.794 - - - - - - - 0.794 - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
97. si:ch73-67c22.3 si:ch73-67c22.3 30 0.793 - - - - - - - 0.793 -
98. RHOBTB3 RHOBTB3 319 0.793 - - - - - 0.793 - - -
99. htra3a ENSDARG00000052895 28 0.793 - - - - - - - 0.793 - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
100. FCHSD2 FCHSD2 35 0.793 - - - - - - - 0.793 -

There are 603 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA