Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for amigo3

Gene Name Gene ID Reads Annotation
amigo3 ENSDARG00000074469 39 adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]










Genes with expression patterns similar to amigo3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. amigo3 ENSDARG00000074469 39 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 adhesion molecule with Ig-like domain 3 [Source:ZFIN;Acc:ZDB-GENE-050208-449]
2. KCNB2 ENSDARG00000088842 35 2.846 1.000 - - - - 0.902 0.944 - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
3. NRG3 NRG3 22 2.568 0.730 - - - - 0.979 0.859 - -
4. TENM2 ENSDARG00000037122 48 2.545 - 0.896 - - - 0.790 0.859 - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
5. SKOR2 SKOR2 1041 2.49 - 0.781 - - - 0.929 0.780 - -
6. si:ch211-39a7.1 ENSDARG00000037427 31 2.435 - - - - 0.929 0.790 0.716 - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
7. dnm1a ENSDARG00000010042 43 2.434 - 0.784 - - - 0.791 0.859 - - dynamin 1a [Source:ZFIN;Acc:ZDB-GENE-081104-27]
8. calb2a ENSDARG00000041062, ENSDARG00000110220 459 2.363 - 0.896 - - - 0.751 0.716 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
9. tmem178b ENSDARG00000006747 173 2.293 - 0.715 - - - 0.775 0.803 - - transmembrane protein 178B [Source:ZFIN;Acc:ZDB-GENE-040718-92]
10. stx1b ENSDARG00000000503 2724 2.127 - 0.704 - - - 0.705 0.718 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
11. gdf10a ENSDARG00000095378 12 1.887 - 0.896 - - - 0.991 - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
12. SEMA6B SEMA6B 35 1.875 - 0.896 - - - 0.979 - - -
13. kcnip3a ENSDARG00000034229 63 1.874 - 0.896 - - - 0.978 - - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
14. rtel1 ENSDARG00000035074 17 1.849 - - - - 0.858 0.991 - - - regulator of telomere elongation helicase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-11]
15. sprn ENSDARG00000056004 128 1.819 - 0.896 - - - 0.923 - - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
16. lbx1b ENSDARG00000018611 399 1.818 - 0.821 - - - 0.997 - - - ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]
17. CABZ01029822.1 ENSDARG00000086931 1654 1.814 - 0.968 - - - - 0.846 - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
18. cdh4 ENSDARG00000015002, ENSDARG00000110803, ENSDARG00000110870 97 1.812 - 0.896 - - - 0.916 - - - cadherin 4, type 1, R-cadherin (retinal) [Source:ZFIN;Acc:ZDB-GENE-991207-1]
19. BAI1_1 BAI1_1 57 1.812 - 0.946 - - - 0.866 - - -
20. prdm14 ENSDARG00000045371 106 1.802 - - - - - 0.943 0.859 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
21. si:dkey-149m13.1 si:dkey-149m13.1 6 1.801 - 0.896 0.905 - - - - - -
22. BX000430.1 ENSDARG00000112057 135 1.791 - 0.896 - - - 0.895 - - - phospholipid phosphatase related 3b [Source:NCBI gene;Acc:570173]
23. si:dkey-156m18.1 si:dkey-156m18.1 13 1.79 - 1.000 - - - 0.790 - - -
24. BAALC 250 1.783 - - - - - 0.855 0.928 - - brain and acute leukemia, cytoplasmic
25. PIAS1 PIAS1 13 1.773 - - - - 0.914 - 0.859 - -
26. CABZ01038313.1 CABZ01038313.1 79 1.769 - 0.896 - - - - 0.873 - -
27. DNAJC14 ENSDARG00000105398 20 1.755 - 0.896 - - - - 0.859 - - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
28. SACS ENSDARG00000091042 15 1.755 - 0.896 - - - - 0.859 - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
29. kcnj14 ENSDARG00000075914 38 1.755 - 0.896 - - - - 0.859 - - potassium inwardly-rectifying channel, subfamily J, member 14 [Source:ZFIN;Acc:ZDB-GENE-100922-48]
30. BTBD17 BTBD17 53 1.755 - 0.896 - - - - 0.859 - -
31. vwc2 ENSDARG00000076495 22 1.755 - 0.896 - - - - 0.859 - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
32. zgc:152951 ENSDARG00000068663, ENSDARG00000113135 22 1.755 - 0.896 - - - - 0.859 - - zgc:152951 [Source:ZFIN;Acc:ZDB-GENE-060929-416]
33. ccdc64 ccdc64 2 1.755 - 0.896 - - - - 0.859 - -
34. mir92b 95 1.755 - 0.896 - - - - 0.859 - - microRNA 92b
35. SSBP2 ENSDARG00000099727 22 1.755 - 0.896 - - - - 0.859 - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
36. lzts1 ENSDARG00000075565 23 1.755 - 0.896 - - - - 0.859 - - leucine zipper, putative tumor suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-081104-431]
37. pag1 ENSDARG00000055875 21 1.755 - 0.896 - - - - 0.859 - - phosphoprotein membrane anchor with glycosphingolipid microdomains 1 [Source:ZFIN;Acc:ZDB-GENE-060503-586]
38. gpr173 ENSDARG00000042922 238 1.747 - - - - - 0.888 0.859 - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
39. si:dkey-148e3.2 si:dkey-148e3.2 117 1.745 - 0.801 - - - - 0.944 - -
40. cadpsb ENSDARG00000070567 458 1.739 - 1.000 - - - 0.739 - - - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
41. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.735 - - - - - 0.949 0.786 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
42. hbaa2 ENSDARG00000069735 10 1.722 0.805 - - - 0.917 - - - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
43. slc12a5b ENSDARG00000078187 329 1.721 - 0.896 - - - 0.825 - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
44. amn1 ENSDARG00000070478, ENSDARG00000111705 72 1.709 - 0.896 - - - - 0.813 - - antagonist of mitotic exit network 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-13]
45. dap1b_1 ENSDARG00000086842, ENSDARG00000109678 830 1.701 0.805 0.896 - - - - - - - death associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-000511-4]
46. neto1l ENSDARG00000071596 57 1.701 - - - - - 0.871 0.830 - - neuropilin (NRP) and tolloid (TLL)-like 1, like [Source:ZFIN;Acc:ZDB-GENE-091207-1]
47. RECK ENSDARG00000090039 15 1.701 0.805 0.896 - - - - - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
48. si:dkey-187i8.2 ENSDARG00000096624 8 1.701 0.805 0.896 - - - - - - - si:dkey-187i8.2 [Source:ZFIN;Acc:ZDB-GENE-121214-181]
49. nell2b ENSDARG00000062797 854 1.699 - 0.990 - - - 0.709 - - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
50. adam23a ENSDARG00000062323 580 1.695 - 0.896 - - - 0.799 - - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
51. si:dkeyp-77h1.4 ENSDARG00000058248 54 1.695 - 0.946 - - - 0.749 - - - si:dkeyp-77h1.4 [Source:ZFIN;Acc:ZDB-GENE-050208-18]
52. lrrc4.1 ENSDARG00000069402 323 1.695 - 0.946 - - - 0.749 - - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
53. gphnb ENSDARG00000100851 118 1.688 - 0.896 - - - 0.792 - - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
54. sall3b ENSDARG00000057586 982 1.688 - 0.956 - - - 0.732 - - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
55. mstnb ENSDARG00000069133 3 1.686 - 0.896 - - - 0.790 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
56. si:ch211-232k18.2 si:ch211-232k18.2 2 1.686 - 0.896 - - - 0.790 - - -
57. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1.686 - 0.896 - - - 0.790 - - -
58. akt3a_1 ENSDARG00000104810 12 1.686 - 0.896 - - - 0.790 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
59. si:dkey-238f9.1 ENSDARG00000079446 51 1.682 - - - - - 0.966 0.716 - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
60. rab14l ENSDARG00000035188 18 1.675 - 0.896 - - 0.779 - - - - RAB14, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-040426-1207]
61. si:ch211-119o8.6 ENSDARG00000026972, ENSDARG00000115846 13 1.674 - 0.896 - - - - - 0.778 - si:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
62. erbb4a ENSDARG00000063207 55 1.662 - - - - - 0.803 0.859 - - erb-b2 receptor tyrosine kinase 4a [Source:ZFIN;Acc:ZDB-GENE-030918-4]
63. itm1 itm1 32 1.661 - - - - 0.871 0.790 - - -
64. syt4 ENSDARG00000036505 421 1.661 - - - - - 0.849 0.812 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
65. RBPMS ENSDARG00000099396 61 1.66 - 0.944 - - - - 0.716 - - RNA binding protein, mRNA processing factor [Source:ZFIN;Acc:ZDB-GENE-161017-145]
66. slc32a1 ENSDARG00000059775 1092 1.657 - 0.931 - - - - 0.726 - - solute carrier family 32 (GABA vesicular transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-061201-1]
67. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 1.657 - 0.896 - - - 0.761 - - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
68. dtnbp1b ENSDARG00000055206 64 1.655 - - - - - 0.841 0.814 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
69. lhx1a ENSDARG00000014018 958 1.651 - - - - - 0.901 0.750 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
70. rbfox3l rbfox3l 34 1.649 - - - - - 0.790 0.859 - -
71. BX248582.3 BX248582.3 3 1.649 - - - - - 0.790 0.859 - -
72. rab11bb_1 ENSDARG00000090086 7 1.649 - - - - - 0.790 0.859 - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
73. si:dkey-266f7.10 ENSDARG00000086613 7 1.649 - - - - - 0.790 0.859 - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
74. PARP6 PARP6 119 1.648 - 0.896 - - - 0.752 - - -
75. chst1 ENSDARG00000088593, ENSDARG00000112011 102 1.645 - 0.896 - - - 0.749 - - - carbohydrate (keratan sulfate Gal-6) sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-21]
76. dpysl5a ENSDARG00000011141 1827 1.644 - 0.916 - - - - 0.728 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
77. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 1.644 - - - - - 0.833 0.811 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
78. zgc:194665 ENSDARG00000004577 136 1.642 - 0.896 - - - 0.746 - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
79. si:ch73-91k6.8 si:ch73-91k6.8 37 1.642 - 0.896 - - - 0.746 - - -
80. atp1a3a ENSDARG00000018259 5393 1.64 - 0.886 - - - 0.754 - - - ATPase Na+/K+ transporting subunit alpha 3a [Source:ZFIN;Acc:ZDB-GENE-001212-7]
81. shhb ENSDARG00000038867 338 1.636 0.745 0.891 - - - - - - - sonic hedgehog b [Source:ZFIN;Acc:ZDB-GENE-980526-41]
82. fstl5 ENSDARG00000040198 213 1.633 - 0.896 - - - 0.737 - - - follistatin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070127-1]
83. fam184b ENSDARG00000055099 199 1.628 0.784 - - - - 0.844 - - - family with sequence similarity 184, member B [Source:ZFIN;Acc:ZDB-GENE-090313-380]
84. GALNT16 ENSDARG00000053190 250 1.627 - 0.769 - - - 0.858 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-131120-189]
85. LRFN5_1 LRFN5_1 96 1.627 - - - - 0.813 0.814 - - -
86. KCNA2 KCNA2 66 1.619 - 0.896 - - - - 0.723 - -
87. stmn4l ENSDARG00000043932 654 1.615 - - - - - 0.785 0.830 - - stathmin-like 4, like [Source:ZFIN;Acc:ZDB-GENE-040718-301]
88. eif4a1a ENSDARG00000092115 46 1.614 0.829 0.785 - - - - - - - eukaryotic translation initiation factor 4A1A [Source:ZFIN;Acc:ZDB-GENE-031030-2]
89. gria4a ENSDARG00000037496 88 1.614 - - - - - 0.771 0.843 - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
90. si:ch211-117m20.4 ENSDARG00000094286 7 1.613 - - 0.754 - - - 0.859 - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
91. thsd7ba ENSDARG00000095022 231 1.613 - 0.854 - - - - 0.759 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
92. si:ch211-237c9.3 si:ch211-237c9.3 17 1.612 - 0.896 - - - - 0.716 - -
93. gpr22 gpr22 115 1.611 - 0.896 - - - - 0.715 - -
94. slitrk3b ENSDARG00000074739 19 1.608 - - - - - 0.749 0.859 - - SLIT and NTRK-like family, member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-352]
95. gpr85 ENSDARG00000068701, ENSDARG00000116501 372 1.605 - 0.888 - - - 0.717 - - - G protein-coupled receptor 85 [Source:ZFIN;Acc:ZDB-GENE-000710-2]
96. clul1 ENSDARG00000055595 103 1.604 - 0.899 - - - - - 0.705 - clusterin-like 1 (retinal) [Source:ZFIN;Acc:ZDB-GENE-031118-57]
97. evlb ENSDARG00000099720 245 1.603 - 0.896 - - - 0.707 - - - Enah/Vasp-like b [Source:ZFIN;Acc:ZDB-GENE-040426-1804]
98. HIST1H4J_4 HIST1H4J_4 9 1.601 - - - - - - 0.859 0.742 -
99. brd2b ENSDARG00000046087 73 1.595 - - - - 0.736 - 0.859 - - bromodomain containing 2b [Source:ZFIN;Acc:ZDB-GENE-070220-1]
100. si:dkey-97a13.9 si:dkey-97a13.9 169 1.595 - 0.870 - - - - 0.725 - -

There are 1468 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA