Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for amfr

Gene Name Gene ID Reads Annotation
amfr 774 autocrine motility factor receptor, E3 ubiquitin protein ligase a, transcript variant X1










Genes with expression patterns similar to amfr

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. amfr 774 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 autocrine motility factor receptor, E3 ubiquitin protein ligase a, transcript variant X1
2. sh3gl3b ENSDARG00000007302 573 2.497 0.979 0.800 - - - - - 0.718 - SH3-domain GRB2-like 3b [Source:ZFIN;Acc:ZDB-GENE-040121-4]
3. cd2ap ENSDARG00000015224 2830 2.475 0.963 - - - - 0.764 0.748 - - CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
4. cpped1 ENSDARG00000031968, ENSDARG00000112438 693 1.88 0.979 0.901 - - - - - - - calcineurin-like phosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-118]
5. cant1a ENSDARG00000012192 1324 1.872 0.971 0.901 - - - - - - - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
6. tmed1b ENSDARG00000017255 2238 1.837 0.962 0.875 - - - - - - - transmembrane p24 trafficking protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1112]
7. sqrdl 1598 1.827 0.953 0.874 - - - - - - - sulfide quinone reductase-like (yeast), transcript variant X2
8. ercc4 ENSDARG00000014161 2167 1.827 0.979 0.848 - - - - - - - excision repair cross-complementation group 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5533]
9. chd2 ENSDARG00000060687 3832 1.752 0.978 0.774 - - - - - - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
10. CU571336.1 ENSDARG00000099892 2164 1.7 0.972 - - - - - 0.728 - -
11. fbxo45 ENSDARG00000071492, ENSDARG00000111553 732 1.694 0.978 - - - - - - 0.716 - F-box protein 45 [Source:ZFIN;Acc:ZDB-GENE-040426-1450]
12. dcp1b ENSDARG00000045484 534 1.689 0.980 0.709 - - - - - - - decapping mRNA 1B [Source:ZFIN;Acc:ZDB-GENE-040819-1]
13. si:dkey-83k24.5 ENSDARG00000093019 506 1.688 0.951 - - - - - 0.737 - - si:dkey-83k24.5 [Source:ZFIN;Acc:ZDB-GENE-081104-440]
14. si:ch1073-392o20.2 ENSDARG00000102599 4172 1.686 0.896 0.790 - - - - - - - si:ch1073-392o20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-431]
15. cpne1 ENSDARG00000075536 4063 1.672 0.925 - - - - - 0.747 - - copine I [Source:ZFIN;Acc:ZDB-GENE-030131-3562]
16. cltcb ENSDARG00000090716 5544 1.667 0.965 0.702 - - - - - - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
17. MGST1 MGST1 1958 1.663 0.953 - - - - - 0.710 - -
18. fgfr2 ENSDARG00000058115 6743 1.652 0.930 - - - - - 0.722 - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
19. he2 945 1.645 0.943 - - - - - - 0.702 - hatching enzyme 2
20. SCYL2 ENSDARG00000032627 683 1.63 - 0.891 - - - - 0.739 - - SCY1 like pseudokinase 2 [Source:HGNC Symbol;Acc:HGNC:19286]
21. phlda2 ENSDARG00000042874, ENSDARG00000114844 3876 1.618 0.910 - - - - - 0.708 - - pleckstrin homology-like domain, family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-050522-73]
22. bdh1 ENSDARG00000059388 3390 1.607 - 0.868 - - - - 0.739 - - 3-hydroxybutyrate dehydrogenase, type 1 [Source:ZFIN;Acc:ZDB-GENE-070410-130]
23. psmc2 ENSDARG00000020101 8095 1.601 0.888 - - - - - 0.713 - - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
24. grb10a ENSDARG00000002013 1349 1.597 - - - - - 0.765 0.832 - - growth factor receptor-bound protein 10a [Source:ZFIN;Acc:ZDB-GENE-040822-32]
25. si:ch211-149a19.3 ENSDARG00000079456 115 1.547 - 0.839 - - - - - 0.708 - si:ch211-149a19.3 [Source:ZFIN;Acc:ZDB-GENE-081104-128]
26. slc47a1 ENSDARG00000046012 1426 1.546 - 0.801 - - - 0.745 - - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
27. tomm20a ENSDARG00000090656, ENSDARG00000103163 2029 1.544 - - - - - - 0.804 0.740 - translocase of outer mitochondrial membrane 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1976]
28. U6 U6 931 1.52 - 0.784 - - - 0.736 - - -
29. TMEM87A TMEM87A 2407 1.501 - - - - - 0.714 0.787 - -
30. waslb ENSDARG00000006283 2160 1.494 - 0.794 - - - - 0.700 - - Wiskott-Aldrich syndrome-like b [Source:ZFIN;Acc:ZDB-GENE-040426-718]
31. cyp2aa8 ENSDARG00000104540 2947 1.49 0.767 0.723 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-041010-183]
32. lrpap1 ENSDARG00000033604, ENSDARG00000116453 1389 1.438 0.714 0.724 - - - - - - - low density lipoprotein receptor-related protein associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5871]
33. sav1 ENSDARG00000006196 1201 1.432 - - - - - 0.717 0.715 - - salvador family WW domain containing protein 1 [Source:ZFIN;Acc:ZDB-GENE-040912-28]
34. cherp ENSDARG00000021812 286 0.998 0.998 - - - - - - - - calcium homeostasis endoplasmic reticulum protein [Source:ZFIN;Acc:ZDB-GENE-040407-1]
35. rnf146 ENSDARG00000089981 715 0.996 0.996 - - - - - - - - ring finger protein 146 [Source:ZFIN;Acc:ZDB-GENE-030131-5997]
36. NAGPA ENSDARG00000075149 983 0.996 0.996 - - - - - - - - N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070928-4]
37. arl8a ENSDARG00000078686 4379 0.99 0.990 - - - - - - - - ADP-ribosylation factor-like 8A [Source:ZFIN;Acc:ZDB-GENE-030131-5025]
38. snx1a ENSDARG00000071031 3975 0.99 0.990 - - - - - - - - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
39. ITFG3 ITFG3 1803 0.988 0.988 - - - - - - - -
40. kras ENSDARG00000010844 2885 0.988 0.988 - - - - - - - - v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040808-67]
41. gabarapl2 ENSDARG00000027200 5120 0.983 0.983 - - - - - - - - GABA(A) receptor-associated protein like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-336]
42. ppp1cab ENSDARG00000071566 4350 0.982 0.982 - - - - - - - - protein phosphatase 1, catalytic subunit, alpha isozyme b [Source:ZFIN;Acc:ZDB-GENE-030131-5512]
43. atg4b ENSDARG00000052104 758 0.981 0.981 - - - - - - - - autophagy related 4B, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040917-3]
44. RNF214 RNF214 816 0.981 0.981 - - - - - - - -
45. bbs5 ENSDARG00000039827 211 0.981 0.981 - - - - - - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
46. mta3 ENSDARG00000054903, ENSDARG00000113436 353 0.981 0.981 - - - - - - - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
47. SUSD4 ENSDARG00000026335 195 0.981 0.981 - - - - - - - - sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
48. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.981 0.981 - - - - - - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
49. daam2 ENSDARG00000028393 226 0.981 0.981 - - - - - - - - dishevelled associated activator of morphogenesis 2 [Source:ZFIN;Acc:ZDB-GENE-070709-1]
50. lyz ENSDARG00000057789, ENSDARG00000109290, ENSDARG00000114098 5991 0.981 0.981 - - - - - - - - lysozyme [Source:ZFIN;Acc:ZDB-GENE-020515-2]
51. tmem194a tmem194a 745 0.981 0.981 - - - - - - - -
52. chst14 ENSDARG00000043011 345 0.981 0.981 - - - - - - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [Source:ZFIN;Acc:ZDB-GENE-040401-3]
53. zyx ENSDARG00000075733 429 0.981 0.981 - - - - - - - - zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]
54. phf12a ENSDARG00000074303 1025 0.98 0.980 - - - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
55. slc22a2 ENSDARG00000030530 313 0.98 0.980 - - - - - - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
56. rnf168 ENSDARG00000112483 594 0.98 0.980 - - - - - - - - ring finger protein 168 [Source:ZFIN;Acc:ZDB-GENE-030131-6013]
57. dhcr7 ENSDARG00000103226 673 0.98 0.980 - - - - - - - - 7-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-030912-9]
58. BX682552.2 BX682552.2 1427 0.979 0.979 - - - - - - - -
59. bfsp2 ENSDARG00000011998 295 0.979 0.979 - - - - - - - - beaded filament structural protein 2, phakinin [Source:ZFIN;Acc:ZDB-GENE-041212-58]
60. tctex1d1 ENSDARG00000103545 409 0.979 0.979 - - - - - - - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
61. HDAC5 ENSDARG00000075139 1287 0.979 0.979 - - - - - - - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
62. cep170a cep170a 652 0.979 0.979 - - - - - - - -
63. ino80db ENSDARG00000062226 504 0.979 0.979 - - - - - - - - INO80 complex subunit Db [Source:ZFIN;Acc:ZDB-GENE-070112-2072]
64. sema4e ENSDARG00000052997 607 0.978 0.978 - - - - - - - - semaphorin 4e [Source:ZFIN;Acc:ZDB-GENE-990715-7]
65. si:ch73-367f21.4 ENSDARG00000071097 862 0.978 0.978 - - - - - - - - si:ch73-367f21.4 [Source:ZFIN;Acc:ZDB-GENE-120214-27]
66. TMEM150A_2 TMEM150A_2 739 0.978 0.978 - - - - - - - -
67. scinla ENSDARG00000102415, ENSDARG00000117110 1996 0.978 0.978 - - - - - - - - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
68. esrp2 ENSDARG00000018814, ENSDARG00000115061 1198 0.978 0.978 - - - - - - - - epithelial splicing regulatory protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9824]
69. myo6a ENSDARG00000044016 847 0.978 0.978 - - - - - - - - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
70. cylda ENSDARG00000060058 768 0.978 0.978 - - - - - - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
71. gbx1 ENSDARG00000071418 871 0.978 0.978 - - - - - - - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
72. ELMSAN1_1 ELMSAN1_1 1337 0.977 0.977 - - - - - - - -
73. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 0.977 0.977 - - - - - - - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
74. nr2f1b ENSDARG00000017168 1487 0.977 0.977 - - - - - - - - nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
75. pfkfb4l pfkfb4l 2539 0.977 0.977 - - - - - - - -
76. apip ENSDARG00000003132 1212 0.977 0.977 - - - - - - - - APAF1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040912-128]
77. mocs2 ENSDARG00000077202, ENSDARG00000114592, ENSDARG00000114882 942 0.977 0.977 - - - - - - - - molybdenum cofactor synthesis 2 [Source:ZFIN;Acc:ZDB-GENE-110411-53]
78. wbscr16 wbscr16 791 0.977 0.977 - - - - - - - -
79. hoxb7a ENSDARG00000056030 1212 0.976 0.976 - - - - - - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
80. ghitm 1443 0.976 0.976 - - - - - - - - growth hormone inducible transmembrane protein
81. eef2a.1 ENSDARG00000042094 1781 0.976 0.976 - - - - - - - - eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
82. AL935029.1 AL935029.1 514 0.976 0.976 - - - - - - - -
83. slc25a5 ENSDARG00000092553 626 0.976 0.976 - - - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
84. whsc1 1701 0.976 0.976 - - - - - - - - Wolf-Hirschhorn syndrome candidate 1
85. dnajc11 1939 0.976 0.976 - - - - - - - - DnaJ heat shock protein family (Hsp40) member C11
86. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 0.975 0.975 - - - - - - - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
87. gtpbp4 ENSDARG00000018961 5323 0.975 0.975 - - - - - - - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
88. itm2ca ENSDARG00000043448 1265 0.975 0.975 - - - - - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
89. ryr1a ENSDARG00000011422 2377 0.975 0.975 - - - - - - - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
90. cbx3b ENSDARG00000092158 1976 0.975 0.975 - - - - - - - - chromobox homolog 3b [Source:ZFIN;Acc:ZDB-GENE-070628-2]
91. vars ENSDARG00000044575 1367 0.975 0.975 - - - - - - - - valyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-010601-1]
92. tarbp2 ENSDARG00000070471 1946 0.974 0.974 - - - - - - - - TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
93. crbn ENSDARG00000054250 673 0.973 0.973 - - - - - - - - cereblon [Source:ZFIN;Acc:ZDB-GENE-040822-43]
94. BX511021.1 ENSDARG00000073936 647 0.973 0.973 - - - - - - - - ferritin, middle subunit-like [Source:NCBI gene;Acc:100006428]
95. nsfb ENSDARG00000038991, ENSDARG00000109915 1443 0.973 0.973 - - - - - - - - N-ethylmaleimide-sensitive factor b [Source:ZFIN;Acc:ZDB-GENE-050808-1]
96. cgnl1 ENSDARG00000015805 856 0.973 0.973 - - - - - - - - cingulin-like 1 [Source:ZFIN;Acc:ZDB-GENE-071009-2]
97. ep300b ENSDARG00000061108 5173 0.972 0.972 - - - - - - - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
98. taf6l ENSDARG00000079684 1408 0.972 0.972 - - - - - - - - TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-6789]
99. selt1b 1396 0.972 0.972 - - - - - - - - selenoprotein T, 1b
100. wdr3 ENSDARG00000011079 1403 0.972 0.972 - - - - - - - - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]

There are 892 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA