Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for amd1

Gene Name Gene ID Reads Annotation
amd1 ENSDARG00000043856, ENSDARG00000111778 9667 adenosylmethionine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-760]










Genes with expression patterns similar to amd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. amd1 ENSDARG00000043856, ENSDARG00000111778 9667 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 adenosylmethionine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-760]
2. NID1 NID1 6192 2.504 0.746 0.953 - - - - 0.805 - -
3. ptp4a2 ptp4a2 3196 1.854 - 0.895 - - - 0.959 - - -
4. evpla ENSDARG00000019808 7565 1.845 - - - - - 0.932 0.913 - - envoplakin a [Source:ZFIN;Acc:ZDB-GENE-030829-19]
5. snx12 ENSDARG00000019060 9563 1.843 - - 0.879 - - 0.964 - - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
6. ctsf ENSDARG00000063095 4564 1.835 - - 0.876 - - 0.959 - - - cathepsin F [Source:ZFIN;Acc:ZDB-GENE-030131-9831]
7. nt5c2b ENSDARG00000058231 3822 1.834 - 0.877 - - - 0.957 - - - 5'-nucleotidase, cytosolic IIb [Source:ZFIN;Acc:ZDB-GENE-061013-522]
8. SMARCA1 ENSDARG00000012776 673 1.823 - 0.876 - - - 0.947 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
9. twf1a ENSDARG00000115712 3465 1.812 - - 0.868 - - 0.944 - - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
10. cdc42 ENSDARG00000044573 11795 1.799 - - 0.847 - - 0.952 - - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
11. zmat5 ENSDARG00000035434 983 1.792 - - 0.852 - - 0.940 - - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
12. acadvl ENSDARG00000016687 5329 1.785 - 0.917 0.868 - - - - - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
13. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.785 - - 0.807 - - - - - 0.978 histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
14. sltm ENSDARG00000052728 6234 1.779 - 0.894 0.885 - - - - - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
15. eaf2 ENSDARG00000010432 3768 1.779 - 0.895 0.884 - - - - - - ELL associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-040625-179]
16. wu:fb12e11 wu:fb12e11 2332 1.75 - 0.881 0.869 - - - - - -
17. ttc3 ENSDARG00000086075 2157 1.749 - 0.892 0.857 - - - - - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
18. naa10 ENSDARG00000071060, ENSDARG00000111093, ENSDARG00000116173 4657 1.74 - 0.878 0.862 - - - - - - N(alpha)-acetyltransferase 10, NatA catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2648]
19. abca12 ENSDARG00000074749 2712 1.739 - - - - - - 0.754 - 0.985 ATP-binding cassette, sub-family A (ABC1), member 12 [Source:ZFIN;Acc:ZDB-GENE-030131-9790]
20. fkbp14 ENSDARG00000040695 7725 1.734 - - 0.769 - - 0.965 - - - FK506 binding protein 14 [Source:ZFIN;Acc:ZDB-GENE-040801-210]
21. phb ENSDARG00000057414 9551 1.732 - - 0.805 - - 0.927 - - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
22. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 50840 1.732 - - - - - 0.891 - - 0.841 H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
23. kdelr2a ENSDARG00000005254 13871 1.726 - - - - - 0.951 0.775 - - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030826-32]
24. plcd1b ENSDARG00000034080 4074 1.726 - - 0.752 - - 0.974 - - - phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
25. rpl7l1 ENSDARG00000042864 3256 1.722 - 0.858 0.864 - - - - - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
26. postnb ENSDARG00000104267 28076 1.718 - - - 0.804 - - - - 0.914 periostin, osteoblast specific factor b [Source:ZFIN;Acc:ZDB-GENE-030131-9120]
27. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 1.713 - - - - - 0.967 0.746 - - coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
28. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 1.705 - - 0.732 - - 0.973 - - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
29. cldne ENSDARG00000043128 6960 1.693 - - - - - 0.929 0.764 - - claudin e [Source:ZFIN;Acc:ZDB-GENE-010328-5]
30. txnipa ENSDARG00000036107 8863 1.683 - - - - - 0.956 0.727 - - thioredoxin interacting protein a [Source:ZFIN;Acc:ZDB-GENE-030804-10]
31. sf3b4 ENSDARG00000018574 7470 1.681 - - - - - 0.954 0.727 - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
32. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 1.679 - - - - - 0.950 0.729 - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
33. atp6v1e1b ENSDARG00000030694 5452 1.678 - 0.912 - - - - 0.766 - - ATPase H+ transporting V1 subunit E1b [Source:ZFIN;Acc:ZDB-GENE-020419-11]
34. AC024175.17 AC024175.17 59065 1.659 - - - - - 0.879 0.780 - -
35. slc16a1 slc16a1 7816 1.649 0.790 - - - 0.859 - - - -
36. AL929434.1 AL929434.1 3294 1.649 - 0.910 - - - - 0.739 - -
37. frem2a ENSDARG00000076856 11022 1.637 - - - - - 0.825 0.812 - - Fras1 related extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-081119-3]
38. mat2aa ENSDARG00000040334 10769 1.622 - 0.741 - - 0.881 - - - - methionine adenosyltransferase II, alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-2049]
39. kpna2 ENSDARG00000038066 7954 1.621 - 0.906 0.715 - - - - - - karyopherin alpha 2 (RAG cohort 1, importin alpha 1) [Source:ZFIN;Acc:ZDB-GENE-040718-22]
40. padi2 ENSDARG00000044167 6765 1.619 - - - - - 0.866 0.753 - - peptidyl arginine deiminase, type II [Source:ZFIN;Acc:ZDB-GENE-031116-67]
41. lsm12b ENSDARG00000109510 14459 1.617 - - 0.780 - - 0.837 - - - LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
42. aldh2.1 ENSDARG00000089924 2883 1.615 - 0.888 - - - - 0.727 - - aldehyde dehydrogenase 2 family member, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1262]
43. ARHGEF5 2727 1.614 - - - - - 0.843 0.771 - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
44. agrn ENSDARG00000079388, ENSDARG00000110127 5806 1.594 0.715 0.879 - - - - - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
45. alox12 ENSDARG00000069463 5787 1.587 - - 0.777 - - - 0.810 - - arachidonate 12-lipoxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-1452]
46. cltca ENSDARG00000043493, ENSDARG00000115370 12561 1.586 0.778 - 0.808 - - - - - - clathrin, heavy chain a (Hc) [Source:ZFIN;Acc:ZDB-GENE-030131-2299]
47. zgc:110333 ENSDARG00000040628 3250 1.579 - 0.849 - - - - 0.730 - - zgc:110333 [Source:ZFIN;Acc:ZDB-GENE-050417-331]
48. gnb2l1 61553 1.577 - - - - 0.714 - - - 0.863 guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
49. cand1 ENSDARG00000017841 8164 1.566 0.743 - 0.823 - - - - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
50. yaf2 ENSDARG00000015966 1905 1.564 - - 0.855 - - - 0.709 - - YY1 associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-041210-115]
51. mri1 ENSDARG00000075754 2567 1.556 0.716 - 0.840 - - - - - - methylthioribose-1-phosphate isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-080204-109]
52. arl4ca ENSDARG00000057606 4686 1.555 - - - - - 0.716 0.839 - - ADP-ribosylation factor-like 4Ca [Source:ZFIN;Acc:ZDB-GENE-050417-265]
53. gars ENSDARG00000059070 17015 1.548 - 0.795 0.753 - - - - - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
54. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.498 - - 0.745 - 0.753 - - - - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
55. mtpn ENSDARG00000104018 4264 1.446 0.737 - - - - - 0.709 - - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
56. col1a2 ENSDARG00000020007 36228 1.432 - - 0.716 - - 0.716 - - - collagen, type I, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8415]
57. slc25a22 14366 0.993 - - - - - - - - 0.993 solute carrier family 25 (mitochondrial carrier: glutamate), member 22, transcript variant X2
58. nhp2 ENSDARG00000069422 9925 0.99 - - - - - - - - 0.990 NHP2 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-533]
59. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 0.987 - - - - - - - - 0.987 Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
60. mapk3 ENSDARG00000070573 6842 0.987 - - - - - 0.987 - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
61. ccnt2b ENSDARG00000036510 3353 0.986 - - - - - - - - 0.986 cyclin T2b [Source:ZFIN;Acc:ZDB-GENE-030131-183]
62. aurka ENSDARG00000012485 3304 0.986 - - - - - - - - 0.986 aurora kinase A [Source:ZFIN;Acc:ZDB-GENE-040801-161]
63. nacad ENSDARG00000012347 1268 0.986 - - - - - - - - 0.986 NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
64. eno2 ENSDARG00000014287 2162 0.986 - - - - - - - - 0.986 enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
65. hoxb9a ENSDARG00000056023 11856 0.986 - - - - - - - - 0.986 homeobox B9a [Source:ZFIN;Acc:ZDB-GENE-990415-109]
66. cox10 ENSDARG00000034309, ENSDARG00000113352 2709 0.986 - - - - - - - - 0.986 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 [Source:ZFIN;Acc:ZDB-GENE-041111-239]
67. slc25a47a ENSDARG00000059923 1285 0.986 - - - - - - - - 0.986 solute carrier family 25, member 47a [Source:ZFIN;Acc:ZDB-GENE-060616-266]
68. eif3ha ENSDARG00000102452 9238 0.986 - - - - - - - - 0.986 eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
69. vps51 ENSDARG00000062016, ENSDARG00000110076 1646 0.986 - - - - - - - - 0.986 vacuolar protein sorting 51 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6008]
70. MYO5C ENSDARG00000104235 1285 0.986 - - - - - - - - 0.986 myosin VC [Source:ZFIN;Acc:ZDB-GENE-131127-196]
71. nol11 ENSDARG00000026767 2528 0.986 - - - - - - - - 0.986 nucleolar protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-419]
72. uqcrc2a ENSDARG00000014794 3949 0.986 - - - - - - - - 0.986 ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
73. SLC9A1 ENSDARG00000067784 1494 0.986 - - - - - - - - 0.986 solute carrier family 9 member A1 [Source:HGNC Symbol;Acc:HGNC:11071]
74. obsl1b ENSDARG00000077388 2511 0.986 - - - - - - - - 0.986 obscurin-like 1b [Source:ZFIN;Acc:ZDB-GENE-050809-29]
75. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 0.986 - - - - - - - - 0.986 l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
76. ranbp10 ENSDARG00000062138, ENSDARG00000110661 2067 0.986 - - - - - - - - 0.986 RAN binding protein 10 [Source:ZFIN;Acc:ZDB-GENE-070705-86]
77. add3a ENSDARG00000040874 4938 0.985 - - - - - - - - 0.985 adducin 3 (gamma) a [Source:ZFIN;Acc:ZDB-GENE-030131-2721]
78. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 0.985 - - - - - - - - 0.985 matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
79. EPHB3 2215 0.985 - - - - - - - - 0.985 EPH receptor B3
80. bhlhe22 ENSDARG00000058039 1673 0.985 - - - - - - - - 0.985 basic helix-loop-helix family, member e22 [Source:ZFIN;Acc:ZDB-GENE-040426-1411]
81. lig3 ENSDARG00000052553 2665 0.985 - - - - - - - - 0.985 ligase III, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-030131-8453]
82. notch2 ENSDARG00000043130 4430 0.984 - - - - - - - - 0.984 notch 2 [Source:ZFIN;Acc:ZDB-GENE-000329-4]
83. bin2b ENSDARG00000010255 2649 0.984 - - - - - - - - 0.984 bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
84. vgll4b ENSDARG00000103730 5266 0.984 - - - - - - - - 0.984 vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
85. hoxb4a ENSDARG00000013533 3857 0.983 - - - - - - - - 0.983 homeobox B4a [Source:ZFIN;Acc:ZDB-GENE-990415-105]
86. rnf150a ENSDARG00000024827 1903 0.982 - - - - - - - - 0.982 ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
87. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 0.982 - - - - - - - - 0.982 BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
88. h2afy2_1 ENSDARG00000087897 9887 0.98 - - - - - - - - 0.980 H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
89. amotl2a ENSDARG00000061923 4713 0.978 - - - - - 0.978 - - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
90. crygm2d3 ENSDARG00000088823 1560 0.975 - - - - - - - - 0.975 crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
91. sptbn2 ENSDARG00000053956 8452 0.974 - - - - - - - - 0.974 spectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
92. myl6 ENSDARG00000008494, ENSDARG00000115496 16296 0.973 - - - - - 0.973 - - - myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
93. CABZ01088039.1 CABZ01088039.1 2482 0.972 - - - - - 0.972 - - -
94. si:ch211-160e1.5 5586 0.971 - - - - - 0.971 - - - si:ch211-160e1.5
95. ube2v1 ENSDARG00000041875 5739 0.97 - - - - - 0.970 - - - ubiquitin-conjugating enzyme E2 variant 1 [Source:ZFIN;Acc:ZDB-GENE-051030-102]
96. rab1ba ENSDARG00000058044 5080 0.969 - - - - - 0.969 - - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
97. uqcrq ENSDARG00000029064, ENSDARG00000116372 32190 0.968 - - - - - - - - 0.968 ubiquinol-cytochrome c reductase, complex III subunit VII [Source:ZFIN;Acc:ZDB-GENE-040718-199]
98. si:dkey-11e23.5 si:dkey-11e23.5 3464 0.967 - - - - - 0.967 - - -
99. si:dkey-29j8.3 1288 0.966 - - - - - 0.966 - - - si:dkey-29j8.3, transcript variant X2
100. impdh2 ENSDARG00000006900 3197 0.965 - - - - - 0.965 - - - IMP (inosine 5'-monophosphate) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030114-5]

There are 913 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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