Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for alx1

Gene Name Gene ID Reads Annotation
alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]










Genes with expression patterns similar to alx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]
2. BX324132.5 BX324132.5 115 2.224 - - - - 0.801 - - 0.722 0.701
3. AL935272.2 AL935272.2 37 1.957 0.957 1.000 - - - - - - -
4. KCNT2 ENSDARG00000075812 23 1.957 0.957 1.000 - - - - - - - potassium channel, subfamily T, member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-783]
5. CU896645.1 CU896645.1 10 1.957 0.957 1.000 - - - - - - -
6. si:dkey-182i3.9 ENSDARG00000096575 56 1.957 - 1.000 - - - - 0.957 - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
7. CABZ01069020.1 ENSDARG00000105806 19 1.957 0.957 1.000 - - - - - - - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
8. gabrr2a ENSDARG00000052982 21 1.957 0.957 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
9. trhrb ENSDARG00000036159 11 1.862 0.862 1.000 - - - - - - - thyrotropin-releasing hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-060503-382]
10. TMEM100_1 TMEM100_1 44 1.798 0.957 - - - 0.841 - - - -
11. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1.797 0.797 1.000 - - - - - - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
12. napgl napgl 39 1.797 0.797 1.000 - - - - - - -
13. si:dkey-163m14.10 si:dkey-163m14.10 33 1.79 0.790 1.000 - - - - - - -
14. slc7a10a ENSDARG00000008100 178 1.755 - 1.000 - - - - 0.755 - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
15. foxg1b ENSDARG00000032705 354 1.735 - 1.000 0.735 - - - - - - forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
16. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1.715 - 1.000 - - - - 0.715 - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
17. ptx3b ENSDARG00000079515 10 1.702 - 1.000 - - - 0.702 - - - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
18. pou3f2a ENSDARG00000070220 817 1.702 - 1.000 - - - - - - 0.702 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
19. ankrd1b ENSDARG00000076192 204 1.7 - 1.000 - - - 0.700 - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
20. zgc:153896 ENSDARG00000003977 142 1.696 - - - - - 0.806 0.890 - - zgc:153896 [Source:ZFIN;Acc:ZDB-GENE-060825-119]
21. dmrta2 ENSDARG00000039412 328 1.684 - - - - - - 0.965 - 0.719 DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
22. DNER ENSDARG00000061031 123 1.67 0.957 - - - - - - 0.713 - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
23. agbl4 ENSDARG00000068050, ENSDARG00000110838 201 1.648 0.939 0.709 - - - - - - - ATP/GTP binding protein-like 4 [Source:ZFIN;Acc:ZDB-GENE-081104-437]
24. si:ch211-199c19.4 si:ch211-199c19.4 27 1.646 - - - - - 0.730 0.916 - -
25. lzts3b ENSDARG00000058558 166 1.646 0.893 - - - - - - 0.753 - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
26. eif3hb ENSDARG00000036116 203 1.6 0.861 - - - - - 0.739 - - eukaryotic translation initiation factor 3, subunit H, b [Source:ZFIN;Acc:ZDB-GENE-051030-42]
27. rorb ENSDARG00000033498 544 1.597 - 0.819 0.778 - - - - - - RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
28. nr2e1 ENSDARG00000017107 340 1.596 - - 0.744 - 0.852 - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
29. gas7a ENSDARG00000074443, ENSDARG00000111294 250 1.592 - - - - - - 0.856 0.736 - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
30. fam208ab ENSDARG00000013346, ENSDARG00000113202 538 1.572 - - - - - 0.782 0.790 - - family with sequence similarity 208, member Ab [Source:ZFIN;Acc:ZDB-GENE-090311-29]
31. celf4 ENSDARG00000070045 1537 1.533 - - - - 0.787 - - 0.746 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
32. mks1 ENSDARG00000059657, ENSDARG00000112247 126 1.508 0.748 - - - - - 0.760 - - Meckel syndrome, type 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3813]
33. zbtb18 ENSDARG00000028228 3653 1.507 - - - - - - - 0.798 0.709 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
34. otx2 766 1.484 - - - - - - - 0.720 0.764 orthodenticle homeobox 2, transcript variant X2
35. SATB1 SATB1 928 1.467 - - - - - - 0.715 0.752 -
36. sfrp5 ENSDARG00000039041 1777 1.463 - - 0.713 - 0.750 - - - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
37. morn2 ENSDARG00000071360 44 1.451 - 0.714 - - - 0.737 - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
38. carf ENSDARG00000019950 303 1.445 - - - 0.729 - - 0.716 - - calcium responsive transcription factor [Source:ZFIN;Acc:ZDB-GENE-070912-172]
39. cldn11a ENSDARG00000020031 284 1.427 - - - - 0.709 - - 0.718 - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
40. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1.425 0.711 0.714 - - - - - - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
41. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.416 0.715 - - 0.701 - - - - - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
42. PUSL1 ENSDARG00000074565 54 1 - 1.000 - - - - - - - pseudouridylate synthase like 1 [Source:ZFIN;Acc:ZDB-GENE-101110-1]
43. CABZ01056274.1 CABZ01056274.1 3 1 - 1.000 - - - - - - -
44. pdgfb pdgfb 5 1 - 1.000 - - - - - - -
45. slc34a1b ENSDARG00000054658 1 1 - 1.000 - - - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-101006-4]
46. CU457819.2 ENSDARG00000105374 8 1 - 1.000 - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
47. SLCO5A1 SLCO5A1 6 1 - 1.000 - - - - - - -
48. dclk3 ENSDARG00000078997 2 1 - 1.000 - - - - - - - doublecortin-like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-224]
49. si:dkey-43f9.1_1 si:dkey-43f9.1_1 3 1 - 1.000 - - - - - - -
50. nab1a ENSDARG00000042940 26 1 - 1.000 - - - - - - - NGFI-A binding protein 1a (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-050208-574]
51. dhrs13l1 ENSDARG00000098746 102 1 - 1.000 - - - - - - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
52. si:dkey-2j6.4 si:dkey-2j6.4 0 1 - 1.000 - - - - - - -
53. si:ch211-102g22.3 si:ch211-102g22.3 2 1 - 1.000 - - - - - - -
54. fth1b ENSDARG00000007975 96 1 - 1.000 - - - - - - - ferritin, heavy polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040912-30]
55. si:dkey-24c2.6 si:dkey-24c2.6 1 1 - 1.000 - - - - - - -
56. ifitm5 ENSDARG00000105153 132 1 - 1.000 - - - - - - - interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
57. pmelb ENSDARG00000033760 206 1 - 1.000 - - - - - - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
58. KIF9 ENSDARG00000031693 11 1 - 1.000 - - - - - - - kinesin family member 9 [Source:ZFIN;Acc:ZDB-GENE-160728-129]
59. hmgb2a ENSDARG00000029722 28 1 - 1.000 - - - - - - - high mobility group box 2a [Source:ZFIN;Acc:ZDB-GENE-051120-126]
60. si:dkey-167i21.4 si:dkey-167i21.4 12 1 - 1.000 - - - - - - -
61. dvr1 dvr1 24 1 - 1.000 - - - - - - -
62. si:dkey-51d8.6 ENSDARG00000090769 17 1 - 1.000 - - - - - - - si:dkey-51d8.6 [Source:ZFIN;Acc:ZDB-GENE-110914-115]
63. CU984579.1 ENSDARG00000116863 15 1 - 1.000 - - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
64. si:ch211-11p18.6 ENSDARG00000077068, ENSDARG00000102360 0 1 - 1.000 - - - - - - - si:ch211-11p18.6 [Source:ZFIN;Acc:ZDB-GENE-070912-24]
65. TAF2_1 TAF2_1 222 1 - 1.000 - - - - - - -
66. si:dkey-246g23.2 ENSDARG00000062964 5 1 - 1.000 - - - - - - - si:dkey-246g23.2 [Source:ZFIN;Acc:ZDB-GENE-050419-100]
67. zgc:112332 ENSDARG00000058966, ENSDARG00000113930 126 1 - 1.000 - - - - - - - zgc:112332 [Source:ZFIN;Acc:ZDB-GENE-050522-387]
68. KLHL29 ENSDARG00000087688 1 1 - 1.000 - - - - - - - kelch-like family member 29 [Source:ZFIN;Acc:ZDB-GENE-121114-1]
69. spice1 ENSDARG00000004647 27 1 - 1.000 - - - - - - - spindle and centriole associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041212-64]
70. TRIM14_10 TRIM14_10 9 1 - 1.000 - - - - - - -
71. si:dkey-61f9.1 ENSDARG00000070414, ENSDARG00000112842 1 1 - 1.000 - - - - - - - si:dkey-61f9.1 [Source:ZFIN;Acc:ZDB-GENE-041210-13]
72. SLC22A14 SLC22A14 24 1 - 1.000 - - - - - - -
73. MYCT1 MYCT1 64 1 - 1.000 - - - - - - -
74. CU464087.2 CU464087.2 15 1 - 1.000 - - - - - - -
75. C9H17orf105 C9H17orf105 29 1 - 1.000 - - - - - - -
76. BX000999.2 BX000999.2 2353 1 - 1.000 - - - - - - -
77. ENSDARG00000092910 ENSDARG00000092910 44 1 - 1.000 - - - - - - -
78. omga ENSDARG00000086573 3 1 - 1.000 - - - - - - - oligodendrocyte myelin glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-091204-203]
79. PDE9A_1 PDE9A_1 1 1 - 1.000 - - - - - - -
80. zgc:92249 14 1 - 1.000 - - - - - - - zgc:92249
81. SLC41A2_1 SLC41A2_1 69 1 - 1.000 - - - - - - -
82. uhrf1bp1 ENSDARG00000077011 6 1 - 1.000 - - - - - - - UHRF1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-090312-82]
83. scn1a 8 1 - 1.000 - - - - - - - sodium channel, voltage-gated, type I, alpha, transcript variant X1
84. tmprss3a ENSDARG00000053315 5 1 - 1.000 - - - - - - - transmembrane serine protease 3a [Source:ZFIN;Acc:ZDB-GENE-070912-70]
85. plekho1a ENSDARG00000061191 98 1 - 1.000 - - - - - - - pleckstrin homology domain containing, family O member 1a [Source:ZFIN;Acc:ZDB-GENE-060503-433]
86. slc1a1 ENSDARG00000020212 104 1 - 1.000 - - - - - - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
87. FBXL21 FBXL21 6 1 - 1.000 - - - - - - -
88. mettl8 ENSDARG00000017359 36 1 - 1.000 - - - - - - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
89. zgc:174642_1 zgc:174642_1 20 1 - 1.000 - - - - - - -
90. CR848025.1 ENSDARG00000100501 35 1 - 1.000 - - - - - - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
91. plekho1b ENSDARG00000077499 21 1 - 1.000 - - - - - - - pleckstrin homology domain containing, family O member 1b [Source:ZFIN;Acc:ZDB-GENE-100609-2]
92. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - 1.000 - - - - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
93. si:dkey-207j16.8 si:dkey-207j16.8 0 1 - 1.000 - - - - - - -
94. zgc:113516 20 1 - 1.000 - - - - - - - zgc:113516
95. CU861664.1 CU861664.1 53 1 - 1.000 - - - - - - -
96. LOXL2 LOXL2 2 1 - 1.000 - - - - - - -
97. atl1 ENSDARG00000060481 251 1 - 1.000 - - - - - - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
98. adamts22 adamts22 79 1 - 1.000 - - - - - - -
99. si:ch1073-76a20.1 si:ch1073-76a20.1 0 1 - 1.000 - - - - - - -
100. nanog ENSDARG00000075113 10 1 - 1.000 - - - - - - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]

There are 1022 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA