Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for alx1

Gene Name Gene ID Reads Annotation
alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]










Genes with expression patterns similar to alx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]
2. BX324132.5 BX324132.5 115 2.224 - - - - 0.801 - - 0.722 0.701
3. KCNT2 ENSDARG00000075812 23 1.957 0.957 1.000 - - - - - - - potassium channel, subfamily T, member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-783]
4. si:dkey-182i3.9 ENSDARG00000096575 56 1.957 - 1.000 - - - - 0.957 - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
5. AL935272.2 AL935272.2 37 1.957 0.957 1.000 - - - - - - -
6. gabrr2a ENSDARG00000052982 21 1.957 0.957 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
7. CU896645.1 CU896645.1 10 1.957 0.957 1.000 - - - - - - -
8. CABZ01069020.1 ENSDARG00000105806 19 1.957 0.957 1.000 - - - - - - - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
9. trhrb ENSDARG00000036159 11 1.862 0.862 1.000 - - - - - - - thyrotropin-releasing hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-060503-382]
10. TMEM100_1 TMEM100_1 44 1.798 0.957 - - - 0.841 - - - -
11. napgl napgl 39 1.797 0.797 1.000 - - - - - - -
12. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1.797 0.797 1.000 - - - - - - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
13. si:dkey-163m14.10 si:dkey-163m14.10 33 1.79 0.790 1.000 - - - - - - -
14. slc7a10a ENSDARG00000008100 178 1.755 - 1.000 - - - - 0.755 - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
15. foxg1b ENSDARG00000032705 354 1.735 - 1.000 0.735 - - - - - - forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
16. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1.715 - 1.000 - - - - 0.715 - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
17. ptx3b ENSDARG00000079515 10 1.702 - 1.000 - - - 0.702 - - - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
18. pou3f2a ENSDARG00000070220 817 1.702 - 1.000 - - - - - - 0.702 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
19. ankrd1b ENSDARG00000076192 204 1.7 - 1.000 - - - 0.700 - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
20. zgc:153896 ENSDARG00000003977 142 1.696 - - - - - 0.806 0.890 - - zgc:153896 [Source:ZFIN;Acc:ZDB-GENE-060825-119]
21. dmrta2 ENSDARG00000039412 328 1.684 - - - - - - 0.965 - 0.719 DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
22. DNER ENSDARG00000061031 123 1.67 0.957 - - - - - - 0.713 - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
23. agbl4 ENSDARG00000068050, ENSDARG00000110838 201 1.648 0.939 0.709 - - - - - - - ATP/GTP binding protein-like 4 [Source:ZFIN;Acc:ZDB-GENE-081104-437]
24. si:ch211-199c19.4 si:ch211-199c19.4 27 1.646 - - - - - 0.730 0.916 - -
25. lzts3b ENSDARG00000058558 166 1.646 0.893 - - - - - - 0.753 - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
26. eif3hb ENSDARG00000036116 203 1.6 0.861 - - - - - 0.739 - - eukaryotic translation initiation factor 3, subunit H, b [Source:ZFIN;Acc:ZDB-GENE-051030-42]
27. rorb ENSDARG00000033498 544 1.597 - 0.819 0.778 - - - - - - RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
28. nr2e1 ENSDARG00000017107 340 1.596 - - 0.744 - 0.852 - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
29. gas7a ENSDARG00000074443, ENSDARG00000111294 250 1.592 - - - - - - 0.856 0.736 - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
30. fam208ab ENSDARG00000013346, ENSDARG00000113202 538 1.572 - - - - - 0.782 0.790 - - family with sequence similarity 208, member Ab [Source:ZFIN;Acc:ZDB-GENE-090311-29]
31. celf4 ENSDARG00000070045 1537 1.533 - - - - 0.787 - - 0.746 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
32. mks1 ENSDARG00000059657, ENSDARG00000112247 126 1.508 0.748 - - - - - 0.760 - - Meckel syndrome, type 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3813]
33. zbtb18 ENSDARG00000028228 3653 1.507 - - - - - - - 0.798 0.709 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
34. otx2 766 1.484 - - - - - - - 0.720 0.764 orthodenticle homeobox 2, transcript variant X2
35. SATB1 SATB1 928 1.467 - - - - - - 0.715 0.752 -
36. sfrp5 ENSDARG00000039041 1777 1.463 - - 0.713 - 0.750 - - - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
37. morn2 ENSDARG00000071360 44 1.451 - 0.714 - - - 0.737 - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
38. carf ENSDARG00000019950 303 1.445 - - - 0.729 - - 0.716 - - calcium responsive transcription factor [Source:ZFIN;Acc:ZDB-GENE-070912-172]
39. cldn11a ENSDARG00000020031 284 1.427 - - - - 0.709 - - 0.718 - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
40. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1.425 0.711 0.714 - - - - - - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
41. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.416 0.715 - - 0.701 - - - - - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
42. slc1a1 ENSDARG00000020212 104 1 - 1.000 - - - - - - - solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 [Source:ZFIN;Acc:ZDB-GENE-040718-414]
43. atl1 ENSDARG00000060481 251 1 - 1.000 - - - - - - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
44. ntsr1 ENSDARG00000077577, ENSDARG00000112950 14 1 - 1.000 - - - - - - - neurotensin receptor 1 (high affinity) [Source:ZFIN;Acc:ZDB-GENE-090313-372]
45. CU457819.2 ENSDARG00000105374 8 1 - 1.000 - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
46. TAF2_1 TAF2_1 222 1 - 1.000 - - - - - - -
47. BX324215.3 BX324215.3 12 1 - 1.000 - - - - - - -
48. si:dkey-281i15.9 si:dkey-281i15.9 1 1 - 1.000 - - - - - - -
49. TRIM14_10 TRIM14_10 9 1 - 1.000 - - - - - - -
50. si:dkey-65b12.13 si:dkey-65b12.13 7 1 - 1.000 - - - - - - -
51. CRELD1 794 1 - 1.000 - - - - - - - cysteine rich with EGF like domains 1
52. SLCO5A1 SLCO5A1 6 1 - 1.000 - - - - - - -
53. DMXL2 ENSDARG00000091293 3 1 - 1.000 - - - - - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
54. cdhr1a ENSDARG00000004643 7 1 - 1.000 - - - - - - - cadherin-related family member 1a [Source:ZFIN;Acc:ZDB-GENE-040924-4]
55. VDAC3 ENSDARG00000003695 34 1 - 1.000 - - - - - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
56. CU861664.1 CU861664.1 53 1 - 1.000 - - - - - - -
57. DLGAP2 DLGAP2 36 1 - 1.000 - - - - - - -
58. si:dkey-246g23.2 ENSDARG00000062964 5 1 - 1.000 - - - - - - - si:dkey-246g23.2 [Source:ZFIN;Acc:ZDB-GENE-050419-100]
59. cabp5b ENSDARG00000028485, ENSDARG00000110087 1 1 - 1.000 - - - - - - - calcium binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-050522-146]
60. SLITRK4 ENSDARG00000079781 54 1 - 1.000 - - - - - - - SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]
61. CU464087.2 CU464087.2 15 1 - 1.000 - - - - - - -
62. si:ch211-225h9.2 si:ch211-225h9.2 16 1 - 1.000 - - - - - - -
63. si:ch211-204a13.1 si:ch211-204a13.1 6 1 - 1.000 - - - - - - -
64. KLHL38 KLHL38 15 1 - 1.000 - - - - - - -
65. svopa ENSDARG00000056833 14 1 - 1.000 - - - - - - - SV2 related protein a [Source:ZFIN;Acc:ZDB-GENE-060526-336]
66. CIT_1 CIT_1 6 1 - 1.000 - - - - - - -
67. zgc:112332 ENSDARG00000058966, ENSDARG00000113930 126 1 - 1.000 - - - - - - - zgc:112332 [Source:ZFIN;Acc:ZDB-GENE-050522-387]
68. si:ch211-251p5.3 si:ch211-251p5.3 39 1 - 1.000 - - - - - - -
69. BX072576.1 ENSDARG00000078204 12 1 - 1.000 - - - - - - - beta-2 adrenergic receptor-like [Source:NCBI gene;Acc:101885642]
70. si:dkey-103e21.5 ENSDARG00000091926, ENSDARG00000110300 12 1 - 1.000 - - - - - - - si:dkey-103e21.5 [Source:ZFIN;Acc:ZDB-GENE-060526-186]
71. lgi3 ENSDARG00000041358 46 1 - 1.000 - - - - - - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
72. vti1a ENSDARG00000045065 7 1 - 1.000 - - - - - - - vesicle transport through interaction with t-SNAREs 1A [Source:ZFIN;Acc:ZDB-GENE-050809-135]
73. TRMT12 ENSDARG00000060338 58 1 - 1.000 - - - - - - - tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182]
74. pdgfb pdgfb 5 1 - 1.000 - - - - - - -
75. MYCT1 MYCT1 64 1 - 1.000 - - - - - - -
76. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - 1.000 - - - - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
77. TTC40 TTC40 1 1 - 1.000 - - - - - - -
78. BX004964.1 ENSDARG00000097134 1 1 - 1.000 - - - - - - -
79. wu:fb63c12 26 1 - 1.000 - - - - - - - wu:fb63c12
80. si:dkey-83m22.8 si:dkey-83m22.8 1 1 - 1.000 - - - - - - -
81. IL17RA_1 IL17RA_1 39 1 - 1.000 - - - - - - -
82. CT573248.1 ENSDARG00000074029 10 1 - 1.000 - - - - - - -
83. CR936337.1 CR936337.1 38 1 - 1.000 - - - - - - -
84. BX511172.1 BX511172.1 1 1 - 1.000 - - - - - - -
85. BX470083.4 ENSDARG00000115059 8 1 - 1.000 - - - - - - -
86. fth1b ENSDARG00000007975 96 1 - 1.000 - - - - - - - ferritin, heavy polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040912-30]
87. AVPR1A AVPR1A 116 1 - 1.000 - - - - - - -
88. CR847844.5 CR847844.5 5 1 - 1.000 - - - - - - -
89. LPHN2_1 LPHN2_1 3 1 - 1.000 - - - - - - -
90. CR628365.1 ENSDARG00000097736 29 1 - 1.000 - - - - - - -
91. si:busm1-71b9.3 11 1 - 1.000 - - - - - - - si:busm1-71b9.3, transcript variant X4
92. myh11a ENSDARG00000009782 80 1 - 1.000 - - - - - - - myosin, heavy chain 11a, smooth muscle [Source:ZFIN;Acc:ZDB-GENE-050531-1]
93. si:dkey-207j16.8 si:dkey-207j16.8 0 1 - 1.000 - - - - - - -
94. pole2 ENSDARG00000100028 42 1 - 1.000 - - - - - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
95. si:ch211-221e5.1 si:ch211-221e5.1 2 1 - 1.000 - - - - - - -
96. mettl8 ENSDARG00000017359 36 1 - 1.000 - - - - - - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
97. AL935174.1 ENSDARG00000109674 18 1 - 1.000 - - - - - - -
98. ARG1 ENSDARG00000057429, ENSDARG00000110741 45 1 - 1.000 - - - - - - - arginase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-181]
99. zgc:113516 20 1 - 1.000 - - - - - - - zgc:113516
100. CABZ01056274.1 CABZ01056274.1 3 1 - 1.000 - - - - - - -

There are 1022 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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