Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for alx1

Gene Name Gene ID Reads Annotation
alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]










Genes with expression patterns similar to alx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]
2. BX324132.5 BX324132.5 115 2.224 - - - - 0.801 - - 0.722 0.701
3. CU896645.1 CU896645.1 10 1.957 0.957 1.000 - - - - - - -
4. CABZ01069020.1 ENSDARG00000105806 19 1.957 0.957 1.000 - - - - - - - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
5. gabrr2a ENSDARG00000052982 21 1.957 0.957 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
6. si:dkey-182i3.9 ENSDARG00000096575 56 1.957 - 1.000 - - - - 0.957 - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
7. AL935272.2 AL935272.2 37 1.957 0.957 1.000 - - - - - - -
8. KCNT2 ENSDARG00000075812 23 1.957 0.957 1.000 - - - - - - - potassium channel, subfamily T, member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-783]
9. trhrb ENSDARG00000036159 11 1.862 0.862 1.000 - - - - - - - thyrotropin-releasing hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-060503-382]
10. TMEM100_1 TMEM100_1 44 1.798 0.957 - - - 0.841 - - - -
11. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1.797 0.797 1.000 - - - - - - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
12. napgl napgl 39 1.797 0.797 1.000 - - - - - - -
13. si:dkey-163m14.10 si:dkey-163m14.10 33 1.79 0.790 1.000 - - - - - - -
14. slc7a10a ENSDARG00000008100 178 1.755 - 1.000 - - - - 0.755 - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
15. foxg1b ENSDARG00000032705 354 1.735 - 1.000 0.735 - - - - - - forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
16. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1.715 - 1.000 - - - - 0.715 - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
17. pou3f2a ENSDARG00000070220 817 1.702 - 1.000 - - - - - - 0.702 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
18. ptx3b ENSDARG00000079515 10 1.702 - 1.000 - - - 0.702 - - - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
19. ankrd1b ENSDARG00000076192 204 1.7 - 1.000 - - - 0.700 - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
20. zgc:153896 ENSDARG00000003977 142 1.696 - - - - - 0.806 0.890 - - zgc:153896 [Source:ZFIN;Acc:ZDB-GENE-060825-119]
21. dmrta2 ENSDARG00000039412 328 1.684 - - - - - - 0.965 - 0.719 DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
22. DNER ENSDARG00000061031 123 1.67 0.957 - - - - - - 0.713 - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
23. agbl4 ENSDARG00000068050, ENSDARG00000110838 201 1.648 0.939 0.709 - - - - - - - ATP/GTP binding protein-like 4 [Source:ZFIN;Acc:ZDB-GENE-081104-437]
24. si:ch211-199c19.4 si:ch211-199c19.4 27 1.646 - - - - - 0.730 0.916 - -
25. lzts3b ENSDARG00000058558 166 1.646 0.893 - - - - - - 0.753 - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
26. eif3hb ENSDARG00000036116 203 1.6 0.861 - - - - - 0.739 - - eukaryotic translation initiation factor 3, subunit H, b [Source:ZFIN;Acc:ZDB-GENE-051030-42]
27. rorb ENSDARG00000033498 544 1.597 - 0.819 0.778 - - - - - - RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
28. nr2e1 ENSDARG00000017107 340 1.596 - - 0.744 - 0.852 - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
29. gas7a ENSDARG00000074443, ENSDARG00000111294 250 1.592 - - - - - - 0.856 0.736 - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
30. fam208ab ENSDARG00000013346, ENSDARG00000113202 538 1.572 - - - - - 0.782 0.790 - - family with sequence similarity 208, member Ab [Source:ZFIN;Acc:ZDB-GENE-090311-29]
31. celf4 ENSDARG00000070045 1537 1.533 - - - - 0.787 - - 0.746 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
32. mks1 ENSDARG00000059657, ENSDARG00000112247 126 1.508 0.748 - - - - - 0.760 - - Meckel syndrome, type 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3813]
33. zbtb18 ENSDARG00000028228 3653 1.507 - - - - - - - 0.798 0.709 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
34. otx2 766 1.484 - - - - - - - 0.720 0.764 orthodenticle homeobox 2, transcript variant X2
35. SATB1 SATB1 928 1.467 - - - - - - 0.715 0.752 -
36. sfrp5 ENSDARG00000039041 1777 1.463 - - 0.713 - 0.750 - - - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
37. morn2 ENSDARG00000071360 44 1.451 - 0.714 - - - 0.737 - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
38. carf ENSDARG00000019950 303 1.445 - - - 0.729 - - 0.716 - - calcium responsive transcription factor [Source:ZFIN;Acc:ZDB-GENE-070912-172]
39. cldn11a ENSDARG00000020031 284 1.427 - - - - 0.709 - - 0.718 - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
40. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1.425 0.711 0.714 - - - - - - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
41. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.416 0.715 - - 0.701 - - - - - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
42. diras1b ENSDARG00000009372 0 1 - 1.000 - - - - - - - DIRAS family, GTP-binding RAS-like 1b [Source:ZFIN;Acc:ZDB-GENE-070912-620]
43. si:dkey-98f17.5 ENSDARG00000068863, ENSDARG00000116489 7 1 - 1.000 - - - - - - - si:dkey-98f17.5 [Source:ZFIN;Acc:ZDB-GENE-060526-354]
44. si:dkey-95p16.1 ENSDARG00000092452 3 1 - 1.000 - - - - - - - si:dkey-95p16.1 [Source:ZFIN;Acc:ZDB-GENE-081104-443]
45. SLC41A2_1 SLC41A2_1 69 1 - 1.000 - - - - - - -
46. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 - 1.000 - - - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
47. BX465848.2 ENSDARG00000116920 6 1 - 1.000 - - - - - - -
48. cyp27a1.4 ENSDARG00000055159 47 1 - 1.000 - - - - - - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
49. CR388231.2 ENSDARG00000105547 25 1 - 1.000 - - - - - - - uncharacterized LOC101883418 [Source:NCBI gene;Acc:101883418]
50. gpc5 gpc5 184 1 - 1.000 - - - - - - -
51. eif2b1_1 ENSDARG00000091402, ENSDARG00000114640 36 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 2B, subunit 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040625-25]
52. zgc:173716 9 1 - 1.000 - - - - - - - zgc:173716
53. si:dkey-7n6.2 ENSDARG00000094602, ENSDARG00000111257 56 1 - 1.000 - - - - - - - si:dkey-7n6.2 [Source:ZFIN;Acc:ZDB-GENE-091204-262]
54. fshb ENSDARG00000010841 0 1 - 1.000 - - - - - - - follicle stimulating hormone subunit beta [Source:ZFIN;Acc:ZDB-GENE-040806-1]
55. si:ch211-10h8.1 si:ch211-10h8.1 10 1 - 1.000 - - - - - - -
56. si:dkey-43f9.1_1 si:dkey-43f9.1_1 3 1 - 1.000 - - - - - - -
57. CR759920.3 CR759920.3 8 1 - 1.000 - - - - - - -
58. zgc:173652_1 4 1 - 1.000 - - - - - - - zgc:173652
59. CABZ01084451.1 CABZ01084451.1 0 1 - 1.000 - - - - - - -
60. INPP5A 1 1 - 1.000 - - - - - - - inositol polyphosphate-5-phosphatase A
61. U2_1 U2_1 0 1 - 1.000 - - - - - - -
62. ahr1a ENSDARG00000020046 2 1 - 1.000 - - - - - - - aryl hydrocarbon receptor 1a [Source:ZFIN;Acc:ZDB-GENE-020531-2]
63. si:dkey-167i21.4 si:dkey-167i21.4 12 1 - 1.000 - - - - - - -
64. si:dkey-283b1.7 ENSDARG00000053460 10 1 - 1.000 - - - - - - - si:dkey-283b1.7 [Source:ZFIN;Acc:ZDB-GENE-120215-126]
65. prkar2ab ENSDARG00000009477 2 1 - 1.000 - - - - - - - protein kinase, cAMP-dependent, regulatory, type II, alpha, B [Source:ZFIN;Acc:ZDB-GENE-040426-2427]
66. CR848025.1 ENSDARG00000100501 35 1 - 1.000 - - - - - - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
67. hs6st3b ENSDARG00000069500 5 1 - 1.000 - - - - - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
68. CABZ01016604.1 CABZ01016604.1 12 1 - 1.000 - - - - - - -
69. smtna ENSDARG00000074652 6 1 - 1.000 - - - - - - - smoothelin a [Source:ZFIN;Acc:ZDB-GENE-091204-245]
70. CABZ01073380.1 CABZ01073380.1 5 1 - 1.000 - - - - - - -
71. neurod6a ENSDARG00000040008 17 1 - 1.000 - - - - - - - neuronal differentiation 6a [Source:ZFIN;Acc:ZDB-GENE-010608-1]
72. arhgef19 ENSDARG00000078853 17 1 - 1.000 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 19 [Source:ZFIN;Acc:ZDB-GENE-090313-243]
73. plekho1a ENSDARG00000061191 98 1 - 1.000 - - - - - - - pleckstrin homology domain containing, family O member 1a [Source:ZFIN;Acc:ZDB-GENE-060503-433]
74. si:dkey-92c21.1 si:dkey-92c21.1 0 1 - 1.000 - - - - - - -
75. atad1b ENSDARG00000056609 40 1 - 1.000 - - - - - - - ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
76. SLC22A14 SLC22A14 24 1 - 1.000 - - - - - - -
77. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1 - 1.000 - - - - - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
78. znf804b ENSDARG00000103396 11 1 - 1.000 - - - - - - - zinc finger protein 804B [Source:ZFIN;Acc:ZDB-GENE-100922-265]
79. ccdc33 ENSDARG00000051858 11 1 - 1.000 - - - - - - - coiled-coil domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-101011-1]
80. osbpl6 ENSDARG00000063730 2 1 - 1.000 - - - - - - - oxysterol binding protein-like 6 [Source:ZFIN;Acc:ZDB-GENE-070912-206]
81. plekho1b ENSDARG00000077499 21 1 - 1.000 - - - - - - - pleckstrin homology domain containing, family O member 1b [Source:ZFIN;Acc:ZDB-GENE-100609-2]
82. spice1 ENSDARG00000004647 27 1 - 1.000 - - - - - - - spindle and centriole associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041212-64]
83. zgc:174642_1 zgc:174642_1 20 1 - 1.000 - - - - - - -
84. MORC4 MORC4 4 1 - 1.000 - - - - - - -
85. gpr126 gpr126 51 1 - 1.000 - - - - - - -
86. ccna2 ENSDARG00000011094 4 1 - 1.000 - - - - - - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
87. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 - 1.000 - - - - - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
88. FP016207.1 FP016207.1 3 1 - 1.000 - - - - - - -
89. C14H5orf45 C14H5orf45 83 1 - 1.000 - - - - - - -
90. BX640518.1 BX640518.1 24 1 - 1.000 - - - - - - -
91. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1 - 1.000 - - - - - - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
92. cdc42ep2 ENSDARG00000053959 32 1 - 1.000 - - - - - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
93. KCNAB3 KCNAB3 134 1 - 1.000 - - - - - - -
94. fam154b fam154b 2 1 - 1.000 - - - - - - -
95. CT963086.1 CT963086.1 0 1 - 1.000 - - - - - - -
96. CR538726.1 ENSDARG00000097179 321 1 - 1.000 - - - - - - -
97. CNTNAP3 ENSDARG00000067824 25 1 - 1.000 - - - - - - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
98. necab2 ENSDARG00000056745, ENSDARG00000110976 304 1 - 1.000 - - - - - - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
99. pwwp2b ENSDARG00000101080 138 1 - 1.000 - - - - - - - PWWP domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110930-2]
100. CU183952.2 CU183952.2 6 1 - 1.000 - - - - - - -

There are 1022 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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