Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for alx1

Gene Name Gene ID Reads Annotation
alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]










Genes with expression patterns similar to alx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]
2. BX324132.5 BX324132.5 115 2.224 - - - - 0.801 - - 0.722 0.701
3. CU896645.1 CU896645.1 10 1.957 0.957 1.000 - - - - - - -
4. gabrr2a ENSDARG00000052982 21 1.957 0.957 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
5. CABZ01069020.1 ENSDARG00000105806 19 1.957 0.957 1.000 - - - - - - - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
6. AL935272.2 AL935272.2 37 1.957 0.957 1.000 - - - - - - -
7. si:dkey-182i3.9 ENSDARG00000096575 56 1.957 - 1.000 - - - - 0.957 - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
8. KCNT2 ENSDARG00000075812 23 1.957 0.957 1.000 - - - - - - - potassium channel, subfamily T, member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-783]
9. trhrb ENSDARG00000036159 11 1.862 0.862 1.000 - - - - - - - thyrotropin-releasing hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-060503-382]
10. TMEM100_1 TMEM100_1 44 1.798 0.957 - - - 0.841 - - - -
11. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1.797 0.797 1.000 - - - - - - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
12. napgl napgl 39 1.797 0.797 1.000 - - - - - - -
13. si:dkey-163m14.10 si:dkey-163m14.10 33 1.79 0.790 1.000 - - - - - - -
14. slc7a10a ENSDARG00000008100 178 1.755 - 1.000 - - - - 0.755 - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
15. foxg1b ENSDARG00000032705 354 1.735 - 1.000 0.735 - - - - - - forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
16. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1.715 - 1.000 - - - - 0.715 - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
17. ptx3b ENSDARG00000079515 10 1.702 - 1.000 - - - 0.702 - - - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
18. pou3f2a ENSDARG00000070220 817 1.702 - 1.000 - - - - - - 0.702 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
19. ankrd1b ENSDARG00000076192 204 1.7 - 1.000 - - - 0.700 - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
20. zgc:153896 ENSDARG00000003977 142 1.696 - - - - - 0.806 0.890 - - zgc:153896 [Source:ZFIN;Acc:ZDB-GENE-060825-119]
21. dmrta2 ENSDARG00000039412 328 1.684 - - - - - - 0.965 - 0.719 DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
22. DNER ENSDARG00000061031 123 1.67 0.957 - - - - - - 0.713 - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
23. agbl4 ENSDARG00000068050, ENSDARG00000110838 201 1.648 0.939 0.709 - - - - - - - ATP/GTP binding protein-like 4 [Source:ZFIN;Acc:ZDB-GENE-081104-437]
24. lzts3b ENSDARG00000058558 166 1.646 0.893 - - - - - - 0.753 - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
25. si:ch211-199c19.4 si:ch211-199c19.4 27 1.646 - - - - - 0.730 0.916 - -
26. eif3hb ENSDARG00000036116 203 1.6 0.861 - - - - - 0.739 - - eukaryotic translation initiation factor 3, subunit H, b [Source:ZFIN;Acc:ZDB-GENE-051030-42]
27. rorb ENSDARG00000033498 544 1.597 - 0.819 0.778 - - - - - - RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
28. nr2e1 ENSDARG00000017107 340 1.596 - - 0.744 - 0.852 - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
29. gas7a ENSDARG00000074443, ENSDARG00000111294 250 1.592 - - - - - - 0.856 0.736 - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
30. fam208ab ENSDARG00000013346, ENSDARG00000113202 538 1.572 - - - - - 0.782 0.790 - - family with sequence similarity 208, member Ab [Source:ZFIN;Acc:ZDB-GENE-090311-29]
31. celf4 ENSDARG00000070045 1537 1.533 - - - - 0.787 - - 0.746 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
32. mks1 ENSDARG00000059657, ENSDARG00000112247 126 1.508 0.748 - - - - - 0.760 - - Meckel syndrome, type 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3813]
33. zbtb18 ENSDARG00000028228 3653 1.507 - - - - - - - 0.798 0.709 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
34. otx2 766 1.484 - - - - - - - 0.720 0.764 orthodenticle homeobox 2, transcript variant X2
35. SATB1 SATB1 928 1.467 - - - - - - 0.715 0.752 -
36. sfrp5 ENSDARG00000039041 1777 1.463 - - 0.713 - 0.750 - - - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
37. morn2 ENSDARG00000071360 44 1.451 - 0.714 - - - 0.737 - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
38. carf ENSDARG00000019950 303 1.445 - - - 0.729 - - 0.716 - - calcium responsive transcription factor [Source:ZFIN;Acc:ZDB-GENE-070912-172]
39. cldn11a ENSDARG00000020031 284 1.427 - - - - 0.709 - - 0.718 - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
40. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1.425 0.711 0.714 - - - - - - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
41. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.416 0.715 - - 0.701 - - - - - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
42. BX465848.2 ENSDARG00000116920 6 1 - 1.000 - - - - - - -
43. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - 1.000 - - - - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
44. lonrf1 ENSDARG00000075048 13 1 - 1.000 - - - - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
45. vwf ENSDARG00000077231 5 1 - 1.000 - - - - - - - von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1]
46. SLCO5A1 SLCO5A1 6 1 - 1.000 - - - - - - -
47. pdgfb pdgfb 5 1 - 1.000 - - - - - - -
48. CABZ01051901.1 ENSDARG00000113246 12 1 - 1.000 - - - - - - - zona pellucida sperm-binding protein 4-like [Source:NCBI gene;Acc:100334275]
49. ZC3H12A ENSDARG00000005271 5 1 - 1.000 - - - - - - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
50. BX927064.1 BX927064.1 46 1 - 1.000 - - - - - - -
51. CR377211.1 ENSDARG00000079364 24 1 - 1.000 - - - - - - - olfactory receptor 2T2-like [Source:NCBI gene;Acc:103910036]
52. lgi3 ENSDARG00000041358 46 1 - 1.000 - - - - - - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
53. SLC22A14 SLC22A14 24 1 - 1.000 - - - - - - -
54. dhrs13l1 ENSDARG00000098746 102 1 - 1.000 - - - - - - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
55. uhrf1bp1 ENSDARG00000077011 6 1 - 1.000 - - - - - - - UHRF1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-090312-82]
56. eif2b1_1 ENSDARG00000091402, ENSDARG00000114640 36 1 - 1.000 - - - - - - - eukaryotic translation initiation factor 2B, subunit 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040625-25]
57. cdc42ep2 ENSDARG00000053959 32 1 - 1.000 - - - - - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
58. CU183952.2 CU183952.2 6 1 - 1.000 - - - - - - -
59. zgc:174698 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 24 1 - 1.000 - - - - - - - zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
60. lrp2b ENSDARG00000007906 23 1 - 1.000 - - - - - - - low density lipoprotein receptor-related protein 2b [Source:ZFIN;Acc:ZDB-GENE-111115-1]
61. dclk3 ENSDARG00000078997 2 1 - 1.000 - - - - - - - doublecortin-like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-224]
62. nab1a ENSDARG00000042940 26 1 - 1.000 - - - - - - - NGFI-A binding protein 1a (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-050208-574]
63. osbpl6 ENSDARG00000063730 2 1 - 1.000 - - - - - - - oxysterol binding protein-like 6 [Source:ZFIN;Acc:ZDB-GENE-070912-206]
64. BX000999.2 BX000999.2 2353 1 - 1.000 - - - - - - -
65. znf804b ENSDARG00000103396 11 1 - 1.000 - - - - - - - zinc finger protein 804B [Source:ZFIN;Acc:ZDB-GENE-100922-265]
66. ATP6AP1L ATP6AP1L 164 1 - 1.000 - - - - - - -
67. zgc:174642_1 zgc:174642_1 20 1 - 1.000 - - - - - - -
68. pmelb ENSDARG00000033760 206 1 - 1.000 - - - - - - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
69. hoxb1a ENSDARG00000008174 462 1 - 1.000 - - - - - - - homeobox B1a [Source:ZFIN;Acc:ZDB-GENE-990415-101]
70. spice1 ENSDARG00000004647 27 1 - 1.000 - - - - - - - spindle and centriole associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041212-64]
71. KIF9 ENSDARG00000031693 11 1 - 1.000 - - - - - - - kinesin family member 9 [Source:ZFIN;Acc:ZDB-GENE-160728-129]
72. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1 - 1.000 - - - - - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
73. NETO2 121 1 - 1.000 - - - - - - - neuropilin and tolloid like 2, transcript variant X2
74. TRIM14_10 TRIM14_10 9 1 - 1.000 - - - - - - -
75. CR788320.1 CR788320.1 1 1 - 1.000 - - - - - - -
76. stag1a ENSDARG00000061205 13 1 - 1.000 - - - - - - - stromal antigen 1a [Source:ZFIN;Acc:ZDB-GENE-070912-448]
77. CR848025.1 ENSDARG00000100501 35 1 - 1.000 - - - - - - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
78. si:dkeyp-82h4.2 si:dkeyp-82h4.2 494 1 - 1.000 - - - - - - -
79. C2H10orf67 C2H10orf67 3 1 - 1.000 - - - - - - -
80. si:ch211-207c6.7 si:ch211-207c6.7 8 1 - 1.000 - - - - - - -
81. soga3a ENSDARG00000063311, ENSDARG00000088571, ENSDARG00000097245 11 1 - 1.000 - - - - - - - SOGA family member 3a [Source:ZFIN;Acc:ZDB-GENE-100921-84]
82. si:dkey-91i10.7 si:dkey-91i10.7 9 1 - 1.000 - - - - - - -
83. si:dkey-83m22.8 si:dkey-83m22.8 1 1 - 1.000 - - - - - - -
84. CABZ01054405.2 CABZ01054405.2 46 1 - 1.000 - - - - - - -
85. cabp5b ENSDARG00000028485, ENSDARG00000110087 1 1 - 1.000 - - - - - - - calcium binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-050522-146]
86. slc12a2_1 ENSDARG00000104573 1 1 - 1.000 - - - - - - - solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040625-53]
87. CU367845.1 CU367845.1 215 1 - 1.000 - - - - - - -
88. CR936337.1 CR936337.1 38 1 - 1.000 - - - - - - -
89. XYLT2 ENSDARG00000059557 1 1 - 1.000 - - - - - - - xylosyltransferase II [Source:ZFIN;Acc:ZDB-GENE-081022-125]
90. KLHL29 ENSDARG00000087688 1 1 - 1.000 - - - - - - - kelch-like family member 29 [Source:ZFIN;Acc:ZDB-GENE-121114-1]
91. PDE9A_1 PDE9A_1 1 1 - 1.000 - - - - - - -
92. zgc:113397 zgc:113397 60 1 - 1.000 - - - - - - -
93. ENSDARG00000077328 ENSDARG00000077328 1 1 - 1.000 - - - - - - -
94. si:ch211-204a13.1 si:ch211-204a13.1 6 1 - 1.000 - - - - - - -
95. ENSDARG00000089102 ENSDARG00000089102 1 1 - 1.000 - - - - - - -
96. si:ch211-221e5.1 si:ch211-221e5.1 2 1 - 1.000 - - - - - - -
97. si:dkey-58f10.4 ENSDARG00000094820 3 1 - 1.000 - - - - - - - si:dkey-58f10.4 [Source:ZFIN;Acc:ZDB-GENE-060526-318]
98. si:dkey-281a10.1 si:dkey-281a10.1 2 1 - 1.000 - - - - - - -
99. ccdc147 ccdc147 39 1 - 1.000 - - - - - - -
100. ENSDARG00000092910 ENSDARG00000092910 44 1 - 1.000 - - - - - - -

There are 1022 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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