Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for alx1

Gene Name Gene ID Reads Annotation
alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]










Genes with expression patterns similar to alx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]
2. BX324132.5 BX324132.5 115 2.224 - - - - 0.801 - - 0.722 0.701
3. AL935272.2 AL935272.2 37 1.957 0.957 1.000 - - - - - - -
4. si:dkey-182i3.9 ENSDARG00000096575 56 1.957 - 1.000 - - - - 0.957 - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
5. KCNT2 ENSDARG00000075812 23 1.957 0.957 1.000 - - - - - - - potassium channel, subfamily T, member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-783]
6. CABZ01069020.1 ENSDARG00000105806 19 1.957 0.957 1.000 - - - - - - - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
7. CU896645.1 CU896645.1 10 1.957 0.957 1.000 - - - - - - -
8. gabrr2a ENSDARG00000052982 21 1.957 0.957 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
9. trhrb ENSDARG00000036159 11 1.862 0.862 1.000 - - - - - - - thyrotropin-releasing hormone receptor b [Source:ZFIN;Acc:ZDB-GENE-060503-382]
10. TMEM100_1 TMEM100_1 44 1.798 0.957 - - - 0.841 - - - -
11. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1.797 0.797 1.000 - - - - - - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
12. napgl napgl 39 1.797 0.797 1.000 - - - - - - -
13. si:dkey-163m14.10 si:dkey-163m14.10 33 1.79 0.790 1.000 - - - - - - -
14. slc7a10a ENSDARG00000008100 178 1.755 - 1.000 - - - - 0.755 - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10a [Source:ZFIN;Acc:ZDB-GENE-080116-1]
15. foxg1b ENSDARG00000032705 354 1.735 - 1.000 0.735 - - - - - - forkhead box G1b [Source:ZFIN;Acc:ZDB-GENE-040426-2437]
16. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1.715 - 1.000 - - - - 0.715 - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
17. pou3f2a ENSDARG00000070220 817 1.702 - 1.000 - - - - - - 0.702 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
18. ptx3b ENSDARG00000079515 10 1.702 - 1.000 - - - 0.702 - - - pentraxin 3, long b [Source:ZFIN;Acc:ZDB-GENE-081104-385]
19. ankrd1b ENSDARG00000076192 204 1.7 - 1.000 - - - 0.700 - - - ankyrin repeat domain 1b (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-070820-13]
20. zgc:153896 ENSDARG00000003977 142 1.696 - - - - - 0.806 0.890 - - zgc:153896 [Source:ZFIN;Acc:ZDB-GENE-060825-119]
21. dmrta2 ENSDARG00000039412 328 1.684 - - - - - - 0.965 - 0.719 DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
22. DNER ENSDARG00000061031 123 1.67 0.957 - - - - - - 0.713 - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
23. agbl4 ENSDARG00000068050, ENSDARG00000110838 201 1.648 0.939 0.709 - - - - - - - ATP/GTP binding protein-like 4 [Source:ZFIN;Acc:ZDB-GENE-081104-437]
24. lzts3b ENSDARG00000058558 166 1.646 0.893 - - - - - - 0.753 - leucine zipper, putative tumor suppressor family member 3b [Source:ZFIN;Acc:ZDB-GENE-110411-249]
25. si:ch211-199c19.4 si:ch211-199c19.4 27 1.646 - - - - - 0.730 0.916 - -
26. eif3hb ENSDARG00000036116 203 1.6 0.861 - - - - - 0.739 - - eukaryotic translation initiation factor 3, subunit H, b [Source:ZFIN;Acc:ZDB-GENE-051030-42]
27. rorb ENSDARG00000033498 544 1.597 - 0.819 0.778 - - - - - - RAR-related orphan receptor B [Source:ZFIN;Acc:ZDB-GENE-061204-2]
28. nr2e1 ENSDARG00000017107 340 1.596 - - 0.744 - 0.852 - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
29. gas7a ENSDARG00000074443, ENSDARG00000111294 250 1.592 - - - - - - 0.856 0.736 - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
30. fam208ab ENSDARG00000013346, ENSDARG00000113202 538 1.572 - - - - - 0.782 0.790 - - family with sequence similarity 208, member Ab [Source:ZFIN;Acc:ZDB-GENE-090311-29]
31. celf4 ENSDARG00000070045 1537 1.533 - - - - 0.787 - - 0.746 - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
32. mks1 ENSDARG00000059657, ENSDARG00000112247 126 1.508 0.748 - - - - - 0.760 - - Meckel syndrome, type 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3813]
33. zbtb18 ENSDARG00000028228 3653 1.507 - - - - - - - 0.798 0.709 zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
34. otx2 766 1.484 - - - - - - - 0.720 0.764 orthodenticle homeobox 2, transcript variant X2
35. SATB1 SATB1 928 1.467 - - - - - - 0.715 0.752 -
36. sfrp5 ENSDARG00000039041 1777 1.463 - - 0.713 - 0.750 - - - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
37. morn2 ENSDARG00000071360 44 1.451 - 0.714 - - - 0.737 - - - MORN repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-230]
38. carf ENSDARG00000019950 303 1.445 - - - 0.729 - - 0.716 - - calcium responsive transcription factor [Source:ZFIN;Acc:ZDB-GENE-070912-172]
39. cldn11a ENSDARG00000020031 284 1.427 - - - - 0.709 - - 0.718 - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
40. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1.425 0.711 0.714 - - - - - - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
41. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.416 0.715 - - 0.701 - - - - - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
42. ENSDARG00000092910 ENSDARG00000092910 44 1 - 1.000 - - - - - - -
43. CABZ01090303.1 CABZ01090303.1 2 1 - 1.000 - - - - - - -
44. si:dkey-58f10.4 ENSDARG00000094820 3 1 - 1.000 - - - - - - - si:dkey-58f10.4 [Source:ZFIN;Acc:ZDB-GENE-060526-318]
45. dzip1l ENSDARG00000074265 61 1 - 1.000 - - - - - - - DAZ interacting zinc finger protein 1-like [Source:ZFIN;Acc:ZDB-GENE-051113-196]
46. si:dkey-189h5.6 ENSDARG00000095188 50 1 - 1.000 - - - - - - - si:dkey-189h5.6 [Source:ZFIN;Acc:ZDB-GENE-060526-230]
47. uhrf1bp1 ENSDARG00000077011 6 1 - 1.000 - - - - - - - UHRF1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-090312-82]
48. stag1a ENSDARG00000061205 13 1 - 1.000 - - - - - - - stromal antigen 1a [Source:ZFIN;Acc:ZDB-GENE-070912-448]
49. omga ENSDARG00000086573 3 1 - 1.000 - - - - - - - oligodendrocyte myelin glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-091204-203]
50. ZNF337_20 ZNF337_20 65 1 - 1.000 - - - - - - -
51. AL929220.1 ENSDARG00000103323 14 1 - 1.000 - - - - - - -
52. si:dkey-43b14.6 si:dkey-43b14.6 20 1 - 1.000 - - - - - - -
53. tnni2a.3 ENSDARG00000013752 15 1 - 1.000 - - - - - - - troponin I type 2a (skeletal, fast), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040718-80]
54. PSTPIP2 ENSDARG00000089569 1 1 - 1.000 - - - - - - - proline-serine-threonine phosphatase interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-90]
55. CST7 CST7 22 1 - 1.000 - - - - - - -
56. kcnh3 ENSDARG00000069560 4 1 - 1.000 - - - - - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
57. lonrf1 ENSDARG00000075048 13 1 - 1.000 - - - - - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
58. si:ch211-209p16.1 si:ch211-209p16.1 1 1 - 1.000 - - - - - - -
59. stk35_1 ENSDARG00000086856 3 1 - 1.000 - - - - - - - serine/threonine kinase 35 [Source:ZFIN;Acc:ZDB-GENE-061103-553]
60. si:ch211-121a2.4 ENSDARG00000028541 40 1 - 1.000 - - - - - - - si:ch211-121a2.4 [Source:ZFIN;Acc:ZDB-GENE-070705-23]
61. CABZ01054405.2 CABZ01054405.2 46 1 - 1.000 - - - - - - -
62. tmprss3a ENSDARG00000053315 5 1 - 1.000 - - - - - - - transmembrane serine protease 3a [Source:ZFIN;Acc:ZDB-GENE-070912-70]
63. zgc:113397 zgc:113397 60 1 - 1.000 - - - - - - -
64. vwf ENSDARG00000077231 5 1 - 1.000 - - - - - - - von Willebrand factor [Source:ZFIN;Acc:ZDB-GENE-070103-1]
65. sp2 ENSDARG00000076763, ENSDARG00000113443, ENSDARG00000115477 20 1 - 1.000 - - - - - - - sp2 transcription factor [Source:ZFIN;Acc:ZDB-GENE-080410-1]
66. ppp1r42 ENSDARG00000057632 32 1 - 1.000 - - - - - - - protein phosphatase 1, regulatory subunit 42 [Source:ZFIN;Acc:ZDB-GENE-040704-43]
67. ntrk1 ENSDARG00000004586 19 1 - 1.000 - - - - - - - neurotrophic tyrosine kinase, receptor, type 1 [Source:ZFIN;Acc:ZDB-GENE-980526-118]
68. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 1 - 1.000 - - - - - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
69. CABZ01056274.1 CABZ01056274.1 3 1 - 1.000 - - - - - - -
70. PUSL1 ENSDARG00000074565 54 1 - 1.000 - - - - - - - pseudouridylate synthase like 1 [Source:ZFIN;Acc:ZDB-GENE-101110-1]
71. AL935174.1 ENSDARG00000109674 18 1 - 1.000 - - - - - - -
72. ARG1 ENSDARG00000057429, ENSDARG00000110741 45 1 - 1.000 - - - - - - - arginase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-181]
73. zgc:113516 20 1 - 1.000 - - - - - - - zgc:113516
74. NETO2 121 1 - 1.000 - - - - - - - neuropilin and tolloid like 2, transcript variant X2
75. specc1 ENSDARG00000029480 54 1 - 1.000 - - - - - - - sperm antigen with calponin homology and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-060526-207]
76. PARP9 ENSDARG00000006848 34 1 - 1.000 - - - - - - - poly(ADP-ribose) polymerase family member 9 [Source:ZFIN;Acc:ZDB-GENE-081104-179]
77. ipp ENSDARG00000075339 3 1 - 1.000 - - - - - - - intracisternal A particle-promoted polypeptide [Source:ZFIN;Acc:ZDB-GENE-080204-28]
78. pmelb ENSDARG00000033760 206 1 - 1.000 - - - - - - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
79. si:ch211-11p18.6 ENSDARG00000077068, ENSDARG00000102360 0 1 - 1.000 - - - - - - - si:ch211-11p18.6 [Source:ZFIN;Acc:ZDB-GENE-070912-24]
80. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1 - 1.000 - - - - - - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
81. slc34a1b ENSDARG00000054658 1 1 - 1.000 - - - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-101006-4]
82. irf4a ENSDARG00000006560 4 1 - 1.000 - - - - - - - interferon regulatory factor 4a [Source:ZFIN;Acc:ZDB-GENE-070912-330]
83. ccdc147 ccdc147 39 1 - 1.000 - - - - - - -
84. pcsk2 ENSDARG00000019451 442 1 - 1.000 - - - - - - - proprotein convertase subtilisin/kexin type 2 [Source:ZFIN;Acc:ZDB-GENE-090608-1]
85. cbln4 ENSDARG00000061240 67 1 - 1.000 - - - - - - - cerebellin 4 precursor [Source:ZFIN;Acc:ZDB-GENE-080204-58]
86. BX927064.1 BX927064.1 46 1 - 1.000 - - - - - - -
87. AKNA_1 AKNA_1 2 1 - 1.000 - - - - - - -
88. LOXL2 LOXL2 2 1 - 1.000 - - - - - - -
89. PRODH PRODH 13 1 - 1.000 - - - - - - -
90. si:ch211-211i20.1 si:ch211-211i20.1 29 1 - 1.000 - - - - - - -
91. ONECUT2 ENSDARG00000090387 8 1 - 1.000 - - - - - - - one cut homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-120215-73]
92. alx4b ENSDARG00000074442 29 1 - 1.000 - - - - - - - ALX homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-050208-140]
93. bai3 bai3 92 1 - 1.000 - - - - - - -
94. nab1a ENSDARG00000042940 26 1 - 1.000 - - - - - - - NGFI-A binding protein 1a (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-050208-574]
95. CABZ01012080.1 CABZ01012080.1 10 1 - 1.000 - - - - - - -
96. lgi3 ENSDARG00000041358 46 1 - 1.000 - - - - - - - leucine-rich repeat LGI family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060217-4]
97. CIT_1 CIT_1 6 1 - 1.000 - - - - - - -
98. zgc:112332 ENSDARG00000058966, ENSDARG00000113930 126 1 - 1.000 - - - - - - - zgc:112332 [Source:ZFIN;Acc:ZDB-GENE-050522-387]
99. si:ch211-251p5.3 si:ch211-251p5.3 39 1 - 1.000 - - - - - - -
100. BX072576.1 ENSDARG00000078204 12 1 - 1.000 - - - - - - - beta-2 adrenergic receptor-like [Source:NCBI gene;Acc:101885642]

There are 1022 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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