Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for alkbh8

Gene Name Gene ID Reads Annotation
alkbh8 ENSDARG00000060256 102 alkB homolog 8, tRNA methyltransferase [Source:ZFIN;Acc:ZDB-GENE-100922-251]










Genes with expression patterns similar to alkbh8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. alkbh8 ENSDARG00000060256 102 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 alkB homolog 8, tRNA methyltransferase [Source:ZFIN;Acc:ZDB-GENE-100922-251]
2. nphp4 ENSDARG00000069014 77 1.594 - - - - - 0.770 0.824 - - nephronophthisis 4 [Source:ZFIN;Acc:ZDB-GENE-060503-715]
3. BEND2 BEND2 92 1.492 - 0.729 - - - - 0.763 - -
4. si:ch211-212k5.1 ENSDARG00000110637 337 1.469 - 0.752 - 0.717 - - - - - si:ch211-212k5.1 [Source:ZFIN;Acc:ZDB-GENE-110914-19]
5. tmlhe ENSDARG00000077547 301 1.444 - 0.701 - - - - 0.743 - - trimethyllysine hydroxylase, epsilon [Source:ZFIN;Acc:ZDB-GENE-091204-144]
6. CABZ01072607.1 ENSDARG00000113761 784 1.431 - 0.724 - 0.707 - - - - - dynein cytoplasmic 2 heavy chain 1 [Source:NCBI gene;Acc:100332402]
7. BX088646.1 BX088646.1 34 0.979 - 0.979 - - - - - - -
8. rdh12 ENSDARG00000018069 396 0.959 - 0.959 - - - - - - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
9. nbn ENSDARG00000040303 43 0.959 - 0.959 - - - - - - - nibrin [Source:ZFIN;Acc:ZDB-GENE-041008-35]
10. wu:fd60c08 wu:fd60c08 35 0.956 - 0.956 - - - - - - -
11. CABZ01064972.1 ENSDARG00000098966 199 0.956 - 0.956 - - - - - - - uncharacterized LOC100538212 [Source:NCBI gene;Acc:100538212]
12. mamdc1 mamdc1 156 0.954 - 0.954 - - - - - - -
13. si:dkey-227h16.2 si:dkey-227h16.2 98 0.952 - 0.952 - - - - - - -
14. plekhg7 ENSDARG00000062855 308 0.947 - 0.947 - - - - - - - pleckstrin homology domain containing, family G (with RhoGef domain) member 7 [Source:ZFIN;Acc:ZDB-GENE-070410-15]
15. kifap3b ENSDARG00000006862 613 0.925 - 0.925 - - - - - - - kinesin-associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2219]
16. nxt2 ENSDARG00000061527, ENSDARG00000113656 277 0.923 - 0.923 - - - - - - - nuclear transport factor 2-like export factor 2 [Source:ZFIN;Acc:ZDB-GENE-050521-1]
17. KCNA1 KCNA1 268 0.918 - 0.918 - - - - - - -
18. ifi35 ENSDARG00000075643 62 0.918 - 0.918 - - - - - - - interferon-induced protein 35 [Source:ZFIN;Acc:ZDB-GENE-100311-2]
19. rtn4rl1b ENSDARG00000098528 31 0.917 - 0.917 - - - - - - - reticulon 4 receptor-like 1b [Source:ZFIN;Acc:ZDB-GENE-040310-3]
20. znf804a ENSDARG00000027079 121 0.916 - 0.916 - - - - - - - zinc finger protein 804A [Source:ZFIN;Acc:ZDB-GENE-070912-632]
21. CMTM8 CMTM8 71 0.916 - 0.916 - - - - - - -
22. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 0.916 - 0.916 - - - - - - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
23. pdlim5a ENSDARG00000101777 357 0.916 - 0.916 - - - - - - - PDZ and LIM domain 5a [Source:ZFIN;Acc:ZDB-GENE-040718-401]
24. sc:d0413 sc:d0413 121 0.916 - 0.916 - - - - - - -
25. JPH3 ENSDARG00000102204 283 0.916 - 0.916 - - - - - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
26. MYOM2 MYOM2 6 0.916 - 0.916 - - - - - - -
27. cyb561 ENSDARG00000038176 55 0.916 - 0.916 - - - - - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
28. zgc:136791 97 0.914 - 0.914 - - - - - - - zgc:136791, transcript variant X3
29. si:dkey-7b17.1 si:dkey-7b17.1 101 0.914 - 0.914 - - - - - - -
30. hmga1b ENSDARG00000070951 377 0.911 - 0.911 - - - - - - - high mobility group AT-hook 1b [Source:ZFIN;Acc:ZDB-GENE-061013-204]
31. arhgap4b ENSDARG00000015003 451 0.889 - 0.889 - - - - - - - Rho GTPase activating protein 4b [Source:ZFIN;Acc:ZDB-GENE-090311-38]
32. si:dkey-26g8.10 si:dkey-26g8.10 100 0.878 - 0.878 - - - - - - -
33. DUSP13_1 DUSP13_1 425 0.876 - 0.876 - - - - - - -
34. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 0.872 - 0.872 - - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
35. SMUG1 ENSDARG00000101308 236 0.869 - - - - - - 0.869 - - single-strand-selective monofunctional uracil-DNA glycosylase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9473]
36. xirp2b ENSDARG00000091090 759 0.868 - 0.868 - - - - - - - xin actin binding repeat containing 2b [Source:ZFIN;Acc:ZDB-GENE-030521-26]
37. marveld3 ENSDARG00000099654 113 0.867 - 0.867 - - - - - - - MARVEL domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1641]
38. nipa1 ENSDARG00000055917 132 0.865 - 0.865 - - - - - - - NIPA magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-041010-164]
39. msxe msxe 362 0.862 - 0.862 - - - - - - -
40. stim1b ENSDARG00000061560 146 0.862 - 0.862 - - - - - - - stromal interaction molecule 1b [Source:ZFIN;Acc:ZDB-GENE-060531-4]
41. pde10a ENSDARG00000003449 60 0.862 - 0.862 - - - - - - - phosphodiesterase 10A [Source:ZFIN;Acc:ZDB-GENE-040426-1115]
42. lgi1a ENSDARG00000020493 1218 0.862 - 0.862 - - - - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
43. trim9 ENSDARG00000039123 53 0.858 - - - - - - 0.858 - - tripartite motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8043]
44. SYT6 SYT6 64 0.856 - 0.856 - - - - - - -
45. arhgap35 254 0.856 - 0.856 - - - - - - - Rho GTPase activating protein 35b, transcript variant X2
46. cnr1 ENSDARG00000009020 33 0.852 - 0.852 - - - - - - - cannabinoid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040312-3]
47. dopey1 438 0.847 - 0.847 - - - - - - - dopey family member 1, transcript variant X4
48. tspan9a ENSDARG00000025299 676 0.847 - - - - - - 0.847 - - tetraspanin 9a [Source:ZFIN;Acc:ZDB-GENE-060503-632]
49. top1mt ENSDARG00000027824, ENSDARG00000104809 195 0.841 - - - - - - 0.841 - - DNA topoisomerase I mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040624-2]
50. cdkn2d ENSDARG00000094176 190 0.839 - 0.839 - - - - - - - cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) [Source:ZFIN;Acc:ZDB-GENE-110316-1]
51. si:dkey-189o20.1 si:dkey-189o20.1 47 0.836 - 0.836 - - - - - - -
52. tp53i11a ENSDARG00000069430 65 0.836 - 0.836 - - - - - - - tumor protein p53 inducible protein 11a [Source:ZFIN;Acc:ZDB-GENE-050306-58]
53. bcap29 ENSDARG00000016231 299 0.833 - - - - - 0.833 - - - B cell receptor associated protein 29 [Source:ZFIN;Acc:ZDB-GENE-050522-468]
54. exd2 ENSDARG00000016117 342 0.832 - 0.832 - - - - - - - exonuclease 3'-5' domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6387]
55. GJD2 GJD2 1351 0.828 - 0.828 - - - - - - -
56. si:ch211-282k23.2 ENSDARG00000093591 447 0.823 - 0.823 - - - - - - - si:ch211-282k23.2 [Source:ZFIN;Acc:ZDB-GENE-050420-314]
57. col15a1b ENSDARG00000061848 398 0.822 - 0.822 - - - - - - - collagen, type XV, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-070912-689]
58. zgc:91811 zgc:91811 186 0.82 - 0.820 - - - - - - -
59. si:rp71-15d4.6 si:rp71-15d4.6 95 0.818 0.818 - - - - - - - -
60. eml1 ENSDARG00000042840 569 0.817 - 0.817 - - - - - - - echinoderm microtubule associated protein like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-156]
61. si:ch73-257c13.2 ENSDARG00000074305 197 0.817 - 0.817 - - - - - - - si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
62. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 0.817 - 0.817 - - - - - - - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
63. si:ch211-223f7.1 si:ch211-223f7.1 38 0.816 - - - - - - 0.816 - -
64. gpc5 gpc5 184 0.816 - - - - - - 0.816 - -
65. pacsin1a ENSDARG00000032865 136 0.816 - 0.816 - - - - - - - protein kinase C and casein kinase substrate in neurons 1a [Source:ZFIN;Acc:ZDB-GENE-050522-155]
66. adkb_1 ENSDARG00000095947 109 0.815 - 0.815 - - - - - - - adenosine kinase b [Source:ZFIN;Acc:ZDB-GENE-030131-948]
67. cbr4 ENSDARG00000009074 240 0.815 - 0.815 - - - - - - - carbonyl reductase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1796]
68. WBP1 ENSDARG00000098583 64 0.814 - 0.814 - - - - - - - WW domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1830]
69. ddx46 ENSDARG00000099458 24 0.814 - 0.814 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
70. dgat1b ENSDARG00000054914 119 0.814 - 0.814 - - - - - - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]
71. C12H10orf71 C12H10orf71 595 0.814 - - - - - - 0.814 - -
72. itm1 itm1 32 0.814 - 0.814 - - - - - - -
73. si:dkey-78i1.2 si:dkey-78i1.2 15 0.814 - 0.814 - - - - - - -
74. slc51a ENSDARG00000045306 33 0.814 - 0.814 - - - - - - - solute carrier family 51, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-10]
75. cldn10l2 ENSDARG00000105042 11 0.814 - 0.814 - - - - - - - claudin 10-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9598]
76. AL929291.1 AL929291.1 16 0.814 - 0.814 - - - - - - -
77. ENSDARG00000078787 ENSDARG00000078787 97 0.814 - 0.814 - - - - - - -
78. GLB1L2 ENSDARG00000034941 74 0.814 - 0.814 - - - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
79. dffb ENSDARG00000009748 204 0.814 - 0.814 - - - - - - - DNA fragmentation factor, beta polypeptide (caspase-activated DNase) [Source:ZFIN;Acc:ZDB-GENE-030826-4]
80. gss ENSDARG00000037706, ENSDARG00000109538 33 0.814 - 0.814 - - - - - - - glutathione synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-208]
81. zgc:173856 ENSDARG00000045424 5 0.814 - 0.814 - - - - - - - zgc:173856 [Source:ZFIN;Acc:ZDB-GENE-030131-5358]
82. si:dkey-253d23.2 ENSDARG00000071589 143 0.814 - 0.814 - - - - - - - si:dkey-253d23.2 [Source:ZFIN;Acc:ZDB-GENE-050208-410]
83. rgs2 ENSDARG00000098761, ENSDARG00000109741 324 0.814 - 0.814 - - - - - - - regulator of G protein signaling 2 [Source:ZFIN;Acc:ZDB-GENE-040718-410]
84. serpinf2a ENSDARG00000076448 4 0.814 - 0.814 - - - - - - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2a [Source:ZFIN;Acc:ZDB-GENE-060822-1]
85. LRRC14 LRRC14 134 0.812 - - - - - - 0.812 - -
86. leng1 ENSDARG00000037633 351 0.811 - 0.811 - - - - - - - leukocyte receptor cluster (LRC) member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-159]
87. fam98b ENSDARG00000060068, ENSDARG00000113494 67 0.81 - 0.810 - - - - - - - family with sequence similarity 98, member B [Source:ZFIN;Acc:ZDB-GENE-061201-63]
88. sptssb ENSDARG00000091658 42 0.807 0.807 - - - - - - - - serine palmitoyltransferase, small subunit B [Source:ZFIN;Acc:ZDB-GENE-060421-6887]
89. npr3 ENSDARG00000035253, ENSDARG00000109797, ENSDARG00000110534 857 0.807 - - - - - - 0.807 - - natriuretic peptide receptor 3 [Source:ZFIN;Acc:ZDB-GENE-060531-91]
90. fam89b ENSDARG00000069106 294 0.806 - 0.806 - - - - - - - family with sequence similarity 89, member B [Source:ZFIN;Acc:ZDB-GENE-091204-269]
91. six4a ENSDARG00000004695 413 0.806 - 0.806 - - - - - - - SIX homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-010201-2]
92. f3b ENSDARG00000005673 240 0.806 - - - - - - 0.806 - - coagulation factor IIIb [Source:ZFIN;Acc:ZDB-GENE-050417-234]
93. tmcc2 ENSDARG00000046007 148 0.806 - 0.806 - - - - - - - transmembrane and coiled-coil domain family 2 [Source:ZFIN;Acc:ZDB-GENE-091202-2]
94. LRCH3 ENSDARG00000100679 147 0.805 - - - - - - 0.805 - - leucine-rich repeats and calponin homology (CH) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071004-44]
95. nme7 ENSDARG00000056193 291 0.805 - - - - - - 0.805 - - NME/NM23 family member 7 [Source:ZFIN;Acc:ZDB-GENE-000210-35]
96. SMG9 ENSDARG00000076627 525 0.803 - 0.803 - - - - - - - smg9 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9385]
97. gpx1b ENSDARG00000006207 67 0.803 - 0.803 - - - - - - - glutathione peroxidase 1b [Source:ZFIN;Acc:ZDB-GENE-040912-60]
98. ampd3a ENSDARG00000005800 498 0.802 0.802 - - - - - - - - adenosine monophosphate deaminase 3a [Source:ZFIN;Acc:ZDB-GENE-110407-2]
99. si:dkey-15j16.6 ENSDARG00000042698 138 0.802 0.802 - - - - - - - - si:dkey-15j16.6 [Source:ZFIN;Acc:ZDB-GENE-130531-45]
100. snoU2_19 snoU2_19 301 0.801 - - - - - - 0.801 - -

There are 394 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA