Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for aire

Gene Name Gene ID Reads Annotation
aire ENSDARG00000056784 0 autoimmune regulator [Source:ZFIN;Acc:ZDB-GENE-071008-4]










Genes with expression patterns similar to aire

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. zgc:113307 ENSDARG00000044894 17 2 - - - - 1.000 - - - 1.000 zgc:113307 [Source:ZFIN;Acc:ZDB-GENE-050522-29]
2. aire ENSDARG00000056784 0 2 - - - - 1.000 - - - 1.000 autoimmune regulator [Source:ZFIN;Acc:ZDB-GENE-071008-4]
3. mrap ENSDARG00000091992 9 1.753 - - - - 0.753 - - - 1.000 melanocortin 2 receptor accessory protein [Source:ZFIN;Acc:ZDB-GENE-060503-387]
4. si:ch211-209l18.6 si:ch211-209l18.6 0 1 - - - - 1.000 - - - -
5. nphs1 ENSDARG00000060758 5 1 - - - - 1.000 - - - - nephrosis 1, congenital, Finnish type (nephrin) [Source:ZFIN;Acc:ZDB-GENE-051102-1]
6. si:ch211-139g16.8 ENSDARG00000093074 13 1 - - - - 1.000 - - - - si:ch211-139g16.8 [Source:ZFIN;Acc:ZDB-GENE-100922-126]
7. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 1 - - - - - - - - 1.000 odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
8. CABZ01021454.2 CABZ01021454.2 3 1 - - - - 1.000 - - - -
9. radil ENSDARG00000079779 14 1 - - - - 1.000 - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
10. smtlb ENSDARG00000017251 7 1 - - - - 1.000 - - - - somatolactin beta [Source:ZFIN;Acc:ZDB-GENE-060123-1]
11. CCDC15 ENSDARG00000067517 28 1 - - - - - - - - 1.000 coiled-coil domain containing 15 [Source:ZFIN;Acc:ZDB-GENE-120411-25]
12. celsr3 ENSDARG00000055825 1 1 - - - - 1.000 - - - - cadherin, EGF LAG seven-pass G-type receptor 3 [Source:ZFIN;Acc:ZDB-GENE-070122-3]
13. nid2b ENSDARG00000009471 4 1 - - - - 1.000 - - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
14. RAB3IL1 ENSDARG00000007711 11 1 - - - - - - - - 1.000 RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
15. CABZ01080435.1 CABZ01080435.1 1 1 - - - - 1.000 - - - -
16. smpdl3a ENSDARG00000053119 1 1 - - - - 1.000 - - - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
17. gabbr1a ENSDARG00000018967 2 1 - - - - 1.000 - - - - gamma-aminobutyric acid (GABA) B receptor, 1a [Source:ZFIN;Acc:ZDB-GENE-030904-5]
18. U12 U12 14 1 - - - - 1.000 - - - -
19. prkar2ab ENSDARG00000009477 2 1 - - - - - - - - 1.000 protein kinase, cAMP-dependent, regulatory, type II, alpha, B [Source:ZFIN;Acc:ZDB-GENE-040426-2427]
20. CU638737.1 CU638737.1 17 1 - - - - 1.000 - - - -
21. ZBED1 ZBED1 2 1 - - - - 1.000 - - - -
22. sirt7 ENSDARG00000060645 1 1 - - - - 1.000 - - - - sirtuin 7 [Source:ZFIN;Acc:ZDB-GENE-050208-612]
23. fam113 ENSDARG00000002685 0 1 - - - - - - - - 1.000 family with sequence similarity 113 [Source:ZFIN;Acc:ZDB-GENE-041212-23]
24. C20H2orf71 C20H2orf71 2 1 - - - - 1.000 - - - -
25. CABZ01046997.2 CABZ01046997.2 7 1 - - - - 1.000 - - - -
26. ZNF70 ZNF70 2 1 - - - - - - - - 1.000
27. nitr1l 0 1 - - - - - - - - 1.000 novel immune-type receptor 1l, transcript variant X2
28. CR792453.3 ENSDARG00000110328 5 1 - - - - - - - - 1.000 uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
29. LPHN1_1 LPHN1_1 7 1 - - - - 1.000 - - - -
30. si:dkey-193b15.5 ENSDARG00000092883 0 1 - - - - 1.000 - - - - si:dkey-193b15.5 [Source:ZFIN;Acc:ZDB-GENE-070912-413]
31. fhit ENSDARG00000078195 0 1 - - - - - - - - 1.000 fragile histidine triad gene [Source:ZFIN;Acc:ZDB-GENE-040426-1703]
32. si:dkey-71l1.1 ENSDARG00000052411 11 1 - - - - - - - - 1.000 si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
33. or128-1 ENSDARG00000105730 1 1 - - - - - - - - 1.000 odorant receptor, family E, subfamily 128, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-106]
34. pde11a ENSDARG00000063732 1 1 - - - - 1.000 - - - - phosphodiesterase 11a [Source:ZFIN;Acc:ZDB-GENE-070912-207]
35. TNFRSF14_8 TNFRSF14_8 6 1 - - - - 1.000 - - - -
36. try 21 1 - - - - - - - - 1.000 trypsin
37. CT573356.3 CT573356.3 2 1 - - - - - - - - 1.000
38. AL935200.4 AL935200.4 3 1 - - - - 1.000 - - - -
39. KCNA2_1 KCNA2_1 15 1 - - - - 1.000 - - - -
40. CR318593.1_1 CR318593.1_1 8 1 - - - - - - - - 1.000
41. prph2a ENSDARG00000038018 2 1 - - - - - - - - 1.000 peripherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
42. si:ch1073-467m9.2 si:ch1073-467m9.2 2 1 - - - - 1.000 - - - -
43. si:ch73-119o17.1 si:ch73-119o17.1 6 1 - - - - 1.000 - - - -
44. cacng8a ENSDARG00000020450 32 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, gamma subunit 8a [Source:ZFIN;Acc:ZDB-GENE-050417-239]
45. AL935296.1 AL935296.1 4 1 - - - - - - - - 1.000
46. CR854855.2 CR854855.2 1 1 - - - - - - - - 1.000
47. si:dkey-44g23.9 si:dkey-44g23.9 1 1 - - - - 1.000 - - - -
48. CU570800.3 ENSDARG00000109285 0 1 - - - - 1.000 - - - -
49. C19H18orf21 C19H18orf21 338 1 - - - - 1.000 - - - -
50. si:ch211-162i8.2 ENSDARG00000096041 4 1 - - - - 1.000 - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
51. CR387932.2 CR387932.2 3 1 - - - - 1.000 - - - -
52. si:ch211-153j24.3 ENSDARG00000068428 0 1 - - - - - - - - 1.000 si:ch211-153j24.3 [Source:ZFIN;Acc:ZDB-GENE-041014-38]
53. zgc:101560 1 1 - - - - 1.000 - - - - zgc:101560, transcript variant 2
54. si:dkey-25o1.4 si:dkey-25o1.4 1 1 - - - - 1.000 - - - -
55. or137-8 ENSDARG00000105705 1 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 137, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-28]
56. ifnphi1 ENSDARG00000025607 6 1 - - - - - - - - 1.000 interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
57. si:ch211-277g23.4 si:ch211-277g23.4 0 1 - - - - 1.000 - - - -
58. GARNL3 GARNL3 1 1 - - - - - - - - 1.000
59. wee2 ENSDARG00000012718, ENSDARG00000112246 2 1 - - - - 1.000 - - - - WEE1 homolog 2 (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-030131-5682]
60. si:ch211-28e16.5 ENSDARG00000093376 2 1 - - - - 1.000 - - - - si:ch211-28e16.5 [Source:ZFIN;Acc:ZDB-GENE-090313-111]
61. CR388413.1 ENSDARG00000100537 1 1 - - - - - - - - 1.000
62. zzef1 ENSDARG00000094380 4 1 - - - - 1.000 - - - - zinc finger, ZZ-type with EF hand domain 1 [Source:ZFIN;Acc:ZDB-GENE-041222-2]
63. diaph3 ENSDARG00000090785 16 1 - - - - - - - - 1.000 diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
64. CABZ01079258.1 CABZ01079258.1 3 1 - - - - 1.000 - - - -
65. CR942805.1 CR942805.1 94 1 - - - - 1.000 - - - -
66. cacna1f cacna1f 1 1 - - - - - - - - 1.000
67. zgc:172109 zgc:172109 0 1 - - - - 1.000 - - - -
68. BX601644.1 ENSDARG00000090632 2 1 - - - - 1.000 - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]
69. si:ch211-266a5.12 ENSDARG00000092714 10 1 - - - - 1.000 - - - - si:ch211-266a5.12 [Source:ZFIN;Acc:ZDB-GENE-081104-210]
70. ZAN ZAN 11 1 - - - - 1.000 - - - -
71. pcolce2b ENSDARG00000055575 2 1 - - - - - - - - 1.000 procollagen C-endopeptidase enhancer 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1177]
72. si:ch211-113e8.5 ENSDARG00000069707 0 1 - - - - 1.000 - - - - si:ch211-113e8.5 [Source:ZFIN;Acc:ZDB-GENE-090312-189]
73. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - 1.000 - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
74. si:ch211-217k17.3 si:ch211-217k17.3 2 1 - - - - - - - - 1.000
75. si:dkeyp-73d8.6 ENSDARG00000079589 1 1 - - - - 1.000 - - - - si:dkeyp-73d8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-683]
76. si:ch211-202n12.3 si:ch211-202n12.3 0 1 - - - - 1.000 - - - -
77. cpn1_1 ENSDARG00000005185, ENSDARG00000096728 2 1 - - - - 1.000 - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
78. si:dkey-118j18.3 si:dkey-118j18.3 4 1 - - - - 1.000 - - - -
79. CR759920.2 CR759920.2 1 1 - - - - 1.000 - - - -
80. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - - - - - 1.000
81. ndr2 ENSDARG00000101279 2 1 - - - - 1.000 - - - - nodal-related 2 [Source:ZFIN;Acc:ZDB-GENE-990415-181]
82. mpeg1 mpeg1 123 1 - - - - 1.000 - - - -
83. or128-8 ENSDARG00000094462 0 1 - - - - - - - - 1.000 odorant receptor, family E, subfamily 128, member 8 [Source:ZFIN;Acc:ZDB-GENE-070806-112]
84. CR388046.2 ENSDARG00000105519 0 1 - - - - 1.000 - - - -
85. cacna1bb ENSDARG00000079295, ENSDARG00000116562 1 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, N type, alpha 1B subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-4]
86. zgc:136639os zgc:136639os 2 1 - - - - - - - - 1.000
87. HELZ2 ENSDARG00000012600 2 1 - - - - - - - - 1.000 helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
88. kcnk2b ENSDARG00000007151 1 1 - - - - 1.000 - - - - potassium channel, subfamily K, member 2b [Source:ZFIN;Acc:ZDB-GENE-051120-69]
89. irbp 2 1 - - - - - - - - 1.000 interphotoreceptor retinoid-binding protein, transcript variant X2
90. si:ch211-120k19.3 si:ch211-120k19.3 5 1 - - - - 1.000 - - - -
91. GPC5 GPC5 11 1 - - - - 1.000 - - - -
92. nms 19 1 - - - - 1.000 - - - - neuromedin S, transcript variant X1
93. v2rh10 ENSDARG00000061883 0 1 - - - - 1.000 - - - - vomeronasal 2 receptor, h10 [Source:ZFIN;Acc:ZDB-GENE-050419-42]
94. AL929276.1 ENSDARG00000113065 0 1 - - - - 1.000 - - - -
95. phc3 ENSDARG00000074604 2 1 - - - - - - - - 1.000 polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
96. si:ch211-231i17.4 ENSDARG00000094903 2 1 - - - - - - - - 1.000 si:ch211-231i17.4 [Source:ZFIN;Acc:ZDB-GENE-110914-104]
97. zgc:174311 zgc:174311 3 1 - - - - - - - - 1.000
98. CABZ01034089.2 CABZ01034089.2 0 1 - - - - - - - - 1.000
99. MDFI ENSDARG00000089564 8 1 - - - - 1.000 - - - - MyoD family inhibitor [Source:HGNC Symbol;Acc:HGNC:6967]
100. si:dkey-20f20.3 si:dkey-20f20.3 7 1 - - - - - - - - 1.000

There are 242 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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