Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for agrn

Gene Name Gene ID Reads Annotation
agrn ENSDARG00000079388, ENSDARG00000110127 5806 agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]










Genes with expression patterns similar to agrn

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. agrn ENSDARG00000079388, ENSDARG00000110127 5806 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
2. ubr4 ENSDARG00000009549 5565 2.506 - 0.935 - - - 0.753 0.818 - - ubiquitin protein ligase E3 component n-recognin 4 [Source:ZFIN;Acc:ZDB-GENE-090313-341]
3. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 2.485 - 0.927 - - - 0.852 0.706 - - metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]
4. zc3h15 ENSDARG00000015889 3861 2.393 - 0.968 - - - - 0.708 - 0.717 zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
5. C19H1orf85 C19H1orf85 1587 1.94 - 0.971 - - - - - 0.969 -
6. zgc:101569 ENSDARG00000038876 1525 1.898 - 0.966 - - - - - 0.932 - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
7. akirin2 ENSDARG00000058729 13245 1.834 - 0.967 - - - 0.867 - - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
8. CU655970.1 CU655970.1 2123 1.792 - 0.961 - - - 0.831 - - -
9. lipin2 2021 1.779 - - - - - 0.834 - 0.945 - lipin 2, transcript variant X2
10. cul4b ENSDARG00000060510 6053 1.767 - 0.963 - - - 0.804 - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
11. NID1 NID1 6192 1.764 0.811 0.953 - - - - - - -
12. tnfaip8l2b ENSDARG00000046148 1133 1.757 - 0.969 - - - - 0.788 - - tumor necrosis factor, alpha-induced protein 8-like 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1359]
13. ttc3 ENSDARG00000086075 2157 1.745 0.776 0.969 - - - - - - - tetratricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-090313-3]
14. ptpn13 ENSDARG00000103699 2866 1.741 - 0.990 - - - 0.751 - - - protein tyrosine phosphatase, non-receptor type 13 [Source:ZFIN;Acc:ZDB-GENE-070410-72]
15. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 1.734 - 0.933 - - - 0.801 - - - ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
16. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.731 - 0.929 - - - - - 0.802 - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
17. fam89a ENSDARG00000079979 4375 1.73 - - - - - 0.823 - 0.907 - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
18. ildr1a ENSDARG00000103929 2390 1.727 - - - - - - 0.794 0.933 - immunoglobulin-like domain containing receptor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1412]
19. hcls1 ENSDARG00000012729 1547 1.725 - - - - - 0.764 - 0.961 - hematopoietic cell-specific Lyn substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7191]
20. TIFA TIFA 1519 1.725 - 0.971 - - - 0.754 - - -
21. cdc14b ENSDARG00000021483 4958 1.721 - 0.967 - - - 0.754 - - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
22. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.714 - 0.947 - - - - - 0.767 - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
23. adnp2b ENSDARG00000028431 4683 1.713 - - - - - 0.757 - 0.956 - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
24. sema3gb ENSDARG00000013607 1531 1.702 - - - - - 0.769 - 0.933 - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Gb [Source:ZFIN;Acc:ZDB-GENE-050513-4]
25. ddr2l ENSDARG00000103830 1921 1.7 0.748 - - - - - - 0.952 - discoidin domain receptor family, member 2, like [Source:ZFIN;Acc:ZDB-GENE-041210-162]
26. suds3 ENSDARG00000073737, ENSDARG00000116918 2416 1.687 - 0.952 - - - 0.735 - - - SDS3 homolog, SIN3A corepressor complex component [Source:ZFIN;Acc:ZDB-GENE-040801-236]
27. aldh2.1 ENSDARG00000089924 2883 1.684 - 0.965 - - - 0.719 - - - aldehyde dehydrogenase 2 family member, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1262]
28. FP236813.1 FP236813.1 1842 1.682 - 0.975 - - - 0.707 - - -
29. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.681 - 0.963 - - - - - - 0.718 proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
30. GATAD2B ENSDARG00000005834 3855 1.679 - 0.964 - - - 0.715 - - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
31. CR293507.1 ENSDARG00000112572 3198 1.669 - 0.964 - - - 0.705 - - -
32. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 1.668 - - - - - - 0.717 0.951 - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
33. smim14 ENSDARG00000005799, ENSDARG00000110934 1094 1.667 - - - - - - 0.735 0.932 - small integral membrane protein 14 [Source:ZFIN;Acc:ZDB-GENE-040426-22]
34. sltm ENSDARG00000052728 6234 1.666 - 0.955 - - - - - - 0.711 SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
35. WIPF2 WIPF2 3171 1.662 - - - - - 0.855 0.807 - -
36. cask cask 3384 1.656 - 0.950 - - - - 0.706 - -
37. slc25a1b ENSDARG00000076381 6213 1.655 - - - - - - 0.742 0.913 - slc25a1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-130114-1]
38. ano10a ENSDARG00000057736 1306 1.651 - - - - - - 0.709 0.942 - anoctamin 10a [Source:ZFIN;Acc:ZDB-GENE-050913-43]
39. eif4e1c ENSDARG00000012274, ENSDARG00000116158 4768 1.65 0.727 0.923 - - - - - - - eukaryotic translation initiation factor 4E family member 1c [Source:ZFIN;Acc:ZDB-GENE-050417-398]
40. sec24d ENSDARG00000045946 2395 1.646 - 0.935 - - - - 0.711 - - SEC24 homolog D, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-070117-2501]
41. wls ENSDARG00000009534 8719 1.644 - 0.934 - - - 0.710 - - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
42. capns1a ENSDARG00000035329 10870 1.636 - 0.733 - - - - - 0.903 - calpain, small subunit 1 a [Source:ZFIN;Acc:ZDB-GENE-030113-3]
43. smox ENSDARG00000036967 3816 1.633 - - - - - - 0.708 0.925 - spermine oxidase [Source:ZFIN;Acc:ZDB-GENE-031201-3]
44. histh1l ENSDARG00000035519 12293 1.627 - 0.738 - - - 0.889 - - - histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
45. fbxo28 ENSDARG00000027159 9602 1.617 - - - - - - 0.727 0.890 - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
46. ACTR3 ENSDARG00000091138 1739 1.613 - - - - - - 0.781 0.832 - ARP3 actin related protein 3 homolog [Source:ZFIN;Acc:ZDB-GENE-040428-2]
47. bmp4 ENSDARG00000019995 2038 1.599 - - - - - 0.701 - 0.898 - bone morphogenetic protein 4 [Source:ZFIN;Acc:ZDB-GENE-980528-2059]
48. amd1 ENSDARG00000043856, ENSDARG00000111778 9667 1.594 0.715 0.879 - - - - - - - adenosylmethionine decarboxylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-760]
49. vps4b ENSDARG00000069175 1922 1.585 0.790 - - - - - 0.795 - - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
50. txn ENSDARG00000044125, ENSDARG00000116040 4758 1.57 - - - - - - 0.741 0.829 - thioredoxin [Source:ZFIN;Acc:ZDB-GENE-040718-162]
51. vps35 ENSDARG00000008224 13245 1.565 - 0.835 - - - 0.730 - - - vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2042]
52. wasf2 ENSDARG00000024209 5338 1.561 - - - - - 0.839 0.722 - - WAS protein family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-865]
53. dpp7 ENSDARG00000027750, ENSDARG00000112154, ENSDARG00000115933 2341 1.561 - 0.796 - - - - 0.765 - - dipeptidyl-peptidase 7 [Source:ZFIN;Acc:ZDB-GENE-050306-16]
54. duox ENSDARG00000062632 1406 1.559 - - - - - 0.801 0.758 - - dual oxidase [Source:ZFIN;Acc:ZDB-GENE-091117-14]
55. csnk1a1_1 ENSDARG00000052674, ENSDARG00000112077 5195 1.557 - - - - - 0.733 0.824 - - casein kinase 1, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-020419-19]
56. tmprss4a ENSDARG00000103117 841 1.551 - - - - - 0.724 0.827 - - transmembrane serine protease 4a [Source:ZFIN;Acc:ZDB-GENE-061103-631]
57. tbcb ENSDARG00000068404, ENSDARG00000109716 5098 1.542 - 0.817 - - - 0.725 - - - tubulin folding cofactor B [Source:ZFIN;Acc:ZDB-GENE-030131-9296]
58. ap2s1 ENSDARG00000026967 18613 1.538 - 0.724 - - - 0.814 - - - adaptor related protein complex 2 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2174]
59. atp6v1e1b ENSDARG00000030694 5452 1.535 - 0.735 - - - 0.800 - - - ATPase H+ transporting V1 subunit E1b [Source:ZFIN;Acc:ZDB-GENE-020419-11]
60. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.534 - - - - - - 0.782 0.752 - keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
61. tmed9 ENSDARG00000004261 10013 1.501 0.745 - - - - - 0.756 - - transmembrane p24 trafficking protein 9 [Source:ZFIN;Acc:ZDB-GENE-050417-434]
62. C13H9orf72 C13H9orf72 2310 1.501 - - - - - - 0.781 - 0.720
63. serpind1 ENSDARG00000021208 665 1.495 - - - - - 0.750 0.745 - - serpin peptidase inhibitor, clade D (heparin cofactor), member 1 [Source:ZFIN;Acc:ZDB-GENE-030711-2]
64. cnn2 ENSDARG00000035858 18201 1.494 - - - - - 0.732 - 0.762 - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
65. abhd17c ENSDARG00000058452, ENSDARG00000111161 1698 1.485 0.736 - 0.749 - - - - - - abhydrolase domain containing 17C [Source:ZFIN;Acc:ZDB-GENE-040426-714]
66. ube2h ENSDARG00000000019 9900 1.485 - 0.772 - - - - 0.713 - - ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-67]
67. si:ch211-51e12.7 ENSDARG00000045914 9598 1.477 - 0.730 - - - 0.747 - - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
68. flot2b ENSDARG00000069774 2831 1.47 - - - - - - 0.753 - 0.717 flotillin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1368]
69. rab5c ENSDARG00000026712 4733 1.47 - - - - - - 0.757 - 0.713 RAB5C, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-031118-30]
70. bsg ENSDARG00000019881 11894 1.47 - - - - - 0.715 0.755 - - basigin [Source:ZFIN;Acc:ZDB-GENE-030131-9638]
71. bzw1b ENSDARG00000099148 2972 1.468 - - - - 0.760 - 0.708 - - basic leucine zipper and W2 domains 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2881]
72. CABZ01013938.1 CABZ01013938.1 4497 1.463 - - - - - 0.733 0.730 - -
73. psenen ENSDARG00000068698 2777 1.459 - - - - - 0.709 0.750 - - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
74. cand1 ENSDARG00000017841 8164 1.452 - - - - - 0.712 0.740 - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
75. sec23b ENSDARG00000019360 6210 1.44 - 0.720 - - - - 0.720 - - Sec23 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-5479]
76. srsf1b ENSDARG00000017843 2760 1.438 - - - - - 0.737 0.701 - - serine/arginine-rich splicing factor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1467]
77. si:dkey-30c15.10 ENSDARG00000088130 1174 1.436 - - - - - 0.734 0.702 - - si:dkey-30c15.10 [Source:ZFIN;Acc:ZDB-GENE-060503-826]
78. abhd16a ENSDARG00000078929 1115 1.435 - - - - - 0.702 0.733 - - abhydrolase domain containing 16A [Source:ZFIN;Acc:ZDB-GENE-010601-2]
79. atp2a2b ENSDARG00000005122 2228 1.434 - - - - - 0.721 0.713 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2b [Source:ZFIN;Acc:ZDB-GENE-030131-867]
80. atp5ia 4773 1.429 - - 0.722 - - 0.707 - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
81. cst3 ENSDARG00000007795 13753 1.424 - - - - - - 0.719 - 0.705 cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
82. si:ch211-196l7.4 ENSDARG00000095451 3766 1.423 - - 0.714 - - 0.709 - - - si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
83. spen ENSDARG00000074245, ENSDARG00000116696 3054 0.989 - 0.989 - - - - - - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
84. trpc4apa ENSDARG00000018840 2543 0.985 - 0.985 - - - - - - - transient receptor potential cation channel, subfamily C, member 4 associated protein a [Source:ZFIN;Acc:ZDB-GENE-000330-3]
85. anapc16 ENSDARG00000013822 5857 0.981 - 0.981 - - - - - - - anaphase promoting complex subunit 16 [Source:ZFIN;Acc:ZDB-GENE-050417-430]
86. CU928070.1 CU928070.1 1152 0.981 - 0.981 - - - - - - -
87. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 0.98 - 0.980 - - - - - - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
88. march5l ENSDARG00000028559 943 0.979 - 0.979 - - - - - - - membrane-associated ring finger (C3HC4) 5, like [Source:ZFIN;Acc:ZDB-GENE-030131-4792]
89. cdc42se1 ENSDARG00000023724 3901 0.979 - 0.979 - - - - - - - CDC42 small effector 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9260]
90. dynlt1 ENSDARG00000045909 2451 0.979 - - - - - - - 0.979 - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
91. helz ENSDARG00000030560 3259 0.977 - 0.977 - - - - - - - helicase with zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-2419]
92. hoxc10a ENSDARG00000070348 2323 0.977 - 0.977 - - - - - - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
93. otub1a ENSDARG00000055536 2892 0.977 - 0.977 - - - - - - - OTU deubiquitinase, ubiquitin aldehyde binding 1a [Source:ZFIN;Acc:ZDB-GENE-040718-108]
94. C18H15orf39 C18H15orf39 1125 0.976 - 0.976 - - - - - - -
95. ass1 8099 0.975 - 0.975 - - - - - - - argininosuccinate synthase 1
96. hoxa10b ENSDARG00000031337 3992 0.975 - 0.975 - - - - - - - homeobox A10b [Source:ZFIN;Acc:ZDB-GENE-990415-97]
97. SRGAP3 ENSDARG00000060309 5353 0.975 - 0.975 - - - - - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-060524-4]
98. ndufv3 ENSDARG00000090389 4829 0.974 - 0.974 - - - - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
99. SMARCA1 ENSDARG00000012776 673 0.974 - 0.974 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-296]
100. MAP4K4 ENSDARG00000098670 4665 0.974 - 0.974 - - - - - - - mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]

There are 1014 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA