Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for afap1l1b

Gene Name Gene ID Reads Annotation
afap1l1b ENSDARG00000056453 583 actin filament associated protein 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-061013-428]










Genes with expression patterns similar to afap1l1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. afap1l1b ENSDARG00000056453 583 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actin filament associated protein 1-like 1b [Source:ZFIN;Acc:ZDB-GENE-061013-428]
2. slc1a7a ENSDARG00000034940 149 1.624 0.801 0.823 - - - - - - - solute carrier family 1 (glutamate transporter), member 7a [Source:ZFIN;Acc:ZDB-GENE-061009-24]
3. zgc:194209 ENSDARG00000039356 317 1.579 0.744 0.835 - - - - - - - zgc:194209 [Source:ZFIN;Acc:ZDB-GENE-081022-75]
4. pigu ENSDARG00000075530 348 1.571 0.817 0.754 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
5. arhgap10 ENSDARG00000078326 994 1.567 - 0.788 - 0.779 - - - - - Rho GTPase activating protein 10 [Source:ZFIN;Acc:ZDB-GENE-060512-221]
6. mrpl9 ENSDARG00000063249 783 1.566 - 0.772 - - - - 0.794 - - mitochondrial ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-070717-4]
7. KDM4A KDM4A 372 1.565 0.857 - - - - - 0.708 - -
8. mob1bb ENSDARG00000012953 873 1.564 0.843 0.721 - - - - - - - MOB kinase activator 1Bb [Source:ZFIN;Acc:ZDB-GENE-050522-58]
9. coq2 ENSDARG00000059510 505 1.555 - - - - - 0.833 0.722 - - coenzyme Q2 4-hydroxybenzoate polyprenyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-84]
10. trappc11 ENSDARG00000004726 969 1.549 0.818 - - 0.731 - - - - - trafficking protein particle complex 11 [Source:ZFIN;Acc:ZDB-GENE-030131-1723]
11. micall1 micall1 720 1.523 0.749 0.774 - - - - - - -
12. clec14a ENSDARG00000103533 718 1.522 - - - - - 0.803 0.719 - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
13. CABZ01093075.1 ENSDARG00000086616 251 1.504 - 0.773 - - - 0.731 - - - cabz01093075.1 [Source:ZFIN;Acc:ZDB-GENE-160113-9]
14. cilp ENSDARG00000053362 1429 1.504 - 0.725 - - - 0.779 - - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
15. tpbgb ENSDARG00000037186 1216 1.5 - 0.706 - - - - 0.794 - - trophoblast glycoprotein b [Source:ZFIN;Acc:ZDB-GENE-091218-2]
16. C22H10orf76 C22H10orf76 1103 1.498 0.764 0.734 - - - - - - -
17. cpsf3l 870 1.496 - 0.739 - - - - 0.757 - - cleavage and polyadenylation specific factor 3-like, transcript variant X1
18. si:ch211-13o20.1 si:ch211-13o20.1 30 1.485 - 0.782 - - 0.703 - - - -
19. orc1 ENSDARG00000039217, ENSDARG00000115400 795 1.48 - 0.733 - - - - 0.747 - - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
20. ATP5J_2 ATP5J_2 2381 1.472 - 0.758 - - - 0.714 - - -
21. hmbsb ENSDARG00000055991 3037 1.456 - 0.734 - - - 0.722 - - - hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]
22. CU638738.1 CU638738.1 131 1.456 - 0.745 - - 0.711 - - - -
23. tyw5 ENSDARG00000069672, ENSDARG00000110022 255 1.443 - 0.713 - - - 0.730 - - - tRNA-yW synthesizing protein 5 [Source:ZFIN;Acc:ZDB-GENE-060929-894]
24. LSM5 ENSDARG00000071573 371 1.432 - 0.717 - - - - 0.715 - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
25. vsg1 1870 1.416 - 0.711 - - - 0.705 - - - vessel-specific 1
26. si:dkey-23a23.3 ENSDARG00000088214 86 0.913 0.913 - - - - - - - - si:dkey-23a23.3 [Source:ZFIN;Acc:ZDB-GENE-110913-89]
27. GABRG3 84 0.893 0.893 - - - - - - - - gamma-aminobutyric acid type A receptor gamma3 subunit
28. FBXL7 ENSDARG00000062251 179 0.89 0.890 - - - - - - - - F-box and leucine-rich repeat protein 7 [Source:ZFIN;Acc:ZDB-GENE-061215-122]
29. zgc:111991 zgc:111991 159 0.888 0.888 - - - - - - - -
30. slc9a3.1 ENSDARG00000058498 46 0.886 0.886 - - - - - - - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060503-545]
31. CU234171.2 CU234171.2 86 0.886 0.886 - - - - - - - -
32. KCNJ16 ENSDARG00000045039 59 0.88 - 0.880 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 16 [Source:ZFIN;Acc:ZDB-GENE-130603-81]
33. camkmt ENSDARG00000095224 1204 0.88 0.880 - - - - - - - - calmodulin-lysine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-090313-49]
34. mast4 1164 0.878 - 0.878 - - - - - - - microtubule associated serine/threonine kinase family member 4, transcript variant X6
35. asb8 ENSDARG00000003383 733 0.873 0.873 - - - - - - - - ankyrin repeat and SOCS box containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5411]
36. SCYL1_1 SCYL1_1 209 0.869 0.869 - - - - - - - -
37. MAST1_1 MAST1_1 1595 0.866 - 0.866 - - - - - - -
38. SHPRH ENSDARG00000075884 382 0.864 0.864 - - - - - - - - SNF2 histone linker PHD RING helicase [Source:ZFIN;Acc:ZDB-GENE-110512-2]
39. si:dkey-192i18.3 si:dkey-192i18.3 47 0.863 0.863 - - - - - - - -
40. TNFRSF25 TNFRSF25 6 0.862 0.862 - - - - - - - -
41. lta ENSDARG00000020483 7 0.862 0.862 - - - - - - - - lymphotoxin alpha (TNF superfamily, member 1) [Source:ZFIN;Acc:ZDB-GENE-050601-3]
42. si:dkey-3d18.4 si:dkey-3d18.4 43 0.861 0.861 - - - - - - - -
43. CR855306.1 ENSDARG00000099475 102 0.858 0.858 - - - - - - - -
44. zgc:154075 ENSDARG00000067630 284 0.858 0.858 - - - - - - - - zgc:154075 [Source:ZFIN;Acc:ZDB-GENE-060929-910]
45. slc16a9a ENSDARG00000013926, ENSDARG00000113368 64 0.857 0.857 - - - - - - - - solute carrier family 16, member 9a [Source:ZFIN;Acc:ZDB-GENE-040426-1364]
46. fgfbp1 fgfbp1 445 0.855 - 0.855 - - - - - - -
47. si:dkey-18j14.4 si:dkey-18j14.4 60 0.855 0.855 - - - - - - - -
48. si:dkeyp-69b9.3 ENSDARG00000088881 109 0.854 0.854 - - - - - - - - si:dkeyp-69b9.3 [Source:ZFIN;Acc:ZDB-GENE-100922-275]
49. TTC17 ENSDARG00000044812 124 0.854 0.854 - - - - - - - - tetratricopeptide repeat domain 17 [Source:ZFIN;Acc:ZDB-GENE-100422-15]
50. polr1b ENSDARG00000077469, ENSDARG00000115880 313 0.854 0.854 - - - - - - - - RNA polymerase I subunit B [Source:ZFIN;Acc:ZDB-GENE-040426-1598]
51. grem2 grem2 743 0.852 - - - - - 0.852 - - -
52. nr1h3 ENSDARG00000098439 859 0.851 - 0.851 - - - - - - - nuclear receptor subfamily 1, group H, member 3 [Source:ZFIN;Acc:ZDB-GENE-050410-7]
53. eif2b1_1 ENSDARG00000091402, ENSDARG00000114640 36 0.849 0.849 - - - - - - - - eukaryotic translation initiation factor 2B, subunit 1 alpha [Source:ZFIN;Acc:ZDB-GENE-040625-25]
54. dnajb6a ENSDARG00000004680 914 0.849 - 0.849 - - - - - - - DnaJ (Hsp40) homolog, subfamily B, member 6a [Source:ZFIN;Acc:ZDB-GENE-040718-45]
55. FAM53C FAM53C 769 0.848 - 0.848 - - - - - - -
56. si:dkey-262g12.4 si:dkey-262g12.4 144 0.848 0.848 - - - - - - - -
57. si:dkeyp-72e1.6 ENSDARG00000099877 126 0.847 0.847 - - - - - - - - si:dkeyp-72e1.6 [Source:ZFIN;Acc:ZDB-GENE-120215-228]
58. CABZ01028403.1 CABZ01028403.1 48 0.847 0.847 - - - - - - - -
59. ppp1r8 ppp1r8 310 0.846 0.846 - - - - - - - -
60. CU929133.1 CU929133.1 94 0.845 0.845 - - - - - - - -
61. KCNJ10 KCNJ10 62 0.845 0.845 - - - - - - - -
62. nsmce4a ENSDARG00000024311 125 0.845 0.845 - - - - - - - - NSE4 homolog A, SMC5-SMC6 complex component [Source:ZFIN;Acc:ZDB-GENE-050522-111]
63. CABZ01006835.1 CABZ01006835.1 92 0.845 0.845 - - - - - - - -
64. si:dkey-1f1.4 si:dkey-1f1.4 105 0.843 0.843 - - - - - - - -
65. fam173a ENSDARG00000041223, ENSDARG00000113102 639 0.843 - - - - - - 0.843 - - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
66. hnrnpc ENSDARG00000053810, ENSDARG00000113662 66 0.843 0.843 - - - - - - - - heterogeneous nuclear ribonucleoprotein C [Source:ZFIN;Acc:ZDB-GENE-040426-2043]
67. rgs3a ENSDARG00000099746 727 0.843 - 0.843 - - - - - - - regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
68. specc1 ENSDARG00000029480 54 0.843 0.843 - - - - - - - - sperm antigen with calponin homology and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-060526-207]
69. NF1 NF1 62 0.843 0.843 - - - - - - - -
70. c1qtnf9 ENSDARG00000058318, ENSDARG00000112904 1274 0.843 - 0.843 - - - - - - - C1q and TNF related 9 [Source:ZFIN;Acc:ZDB-GENE-080303-33]
71. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 0.843 0.843 - - - - - - - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
72. C9H3orf38 C9H3orf38 83 0.843 0.843 - - - - - - - -
73. CCNJ ENSDARG00000059917 115 0.843 0.843 - - - - - - - - cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
74. timeless ENSDARG00000078497 1114 0.842 - 0.842 - - - - - - - timeless circadian clock [Source:ZFIN;Acc:ZDB-GENE-030131-8978]
75. olfml2bb ENSDARG00000021480 256 0.841 0.841 - - - - - - - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
76. dio3b ENSDARG00000095767 521 0.84 - 0.840 - - - - - - - iodothyronine deiodinase 3b [Source:NCBI gene;Acc:798872]
77. si:ch1073-184j22.2 ENSDARG00000078598 707 0.84 - - - - - 0.840 - - - si:ch1073-184j22.2 [Source:ZFIN;Acc:ZDB-GENE-081104-32]
78. gfra4 gfra4 287 0.84 0.840 - - - - - - - -
79. hbae1 14666 0.839 - 0.839 - - - - - - - hemoglobin, alpha embryonic 1
80. jdp2 jdp2 301 0.838 - 0.838 - - - - - - -
81. zgc:158463_1 ENSDARG00000089382 23 0.837 0.837 - - - - - - - - zgc:158463 [Source:ZFIN;Acc:ZDB-GENE-070410-9]
82. ska3 ENSDARG00000069917, ENSDARG00000114978 497 0.836 0.836 - - - - - - - - spindle and kinetochore associated complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2997]
83. C2H3orf58 C2H3orf58 39 0.835 0.835 - - - - - - - -
84. rpgra ENSDARG00000056617 77 0.835 0.835 - - - - - - - - retinitis pigmentosa GTPase regulator a [Source:ZFIN;Acc:ZDB-GENE-070912-423]
85. arid1ab ENSDARG00000101891 1722 0.833 0.833 - - - - - - - - AT rich interactive domain 1Ab (SWI-like) [Source:ZFIN;Acc:ZDB-GENE-030131-5725]
86. FAM183B FAM183B 25 0.832 0.832 - - - - - - - -
87. CABZ01034082.1 ENSDARG00000099583 2237 0.832 - 0.832 - - - - - - -
88. FAM210B ENSDARG00000052638 1755 0.832 - 0.832 - - - - - - - family with sequence similarity 210, member B [Source:ZFIN;Acc:ZDB-GENE-050913-122]
89. idh3g ENSDARG00000023648 4877 0.832 0.832 - - - - - - - - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
90. mafba ENSDARG00000017121 1215 0.832 - 0.832 - - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ba [Source:ZFIN;Acc:ZDB-GENE-980526-515]
91. zc3h7a ENSDARG00000102195 564 0.831 - 0.831 - - - - - - - zinc finger CCCH-type containing 7A [Source:ZFIN;Acc:ZDB-GENE-040426-2776]
92. TMEM230 TMEM230 351 0.831 0.831 - - - - - - - -
93. yy1a ENSDARG00000042796 4982 0.831 - 0.831 - - - - - - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
94. zgc:103438 ENSDARG00000035663 46 0.831 0.831 - - - - - - - - zgc:103438 [Source:ZFIN;Acc:ZDB-GENE-041010-131]
95. CDH24 CDH24 325 0.831 - 0.831 - - - - - - -
96. EIF2B5 ENSDARG00000074995 1277 0.83 0.830 - - - - - - - - eukaryotic translation initiation factor 2B, subunit 5 epsilon [Source:ZFIN;Acc:ZDB-GENE-030131-5364]
97. CABZ01074435.1 CABZ01074435.1 4551 0.829 - - - - - 0.829 - - -
98. CABZ01045618.2 CABZ01045618.2 1663 0.829 - 0.829 - - - - - - -
99. lpcat4 ENSDARG00000035028 167 0.829 0.829 - - - - - - - - lysophosphatidylcholine acyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5777]
100. hdac6 ENSDARG00000008384 144 0.829 0.829 - - - - - - - - histone deacetylase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3232]

There are 727 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA