Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for actr3b

Gene Name Gene ID Reads Annotation
actr3b ENSDARG00000008790 136 ARP3 actin related protein 3 homolog B [Source:ZFIN;Acc:ZDB-GENE-070424-10]










Genes with expression patterns similar to actr3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. actr3b ENSDARG00000008790 136 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ARP3 actin related protein 3 homolog B [Source:ZFIN;Acc:ZDB-GENE-070424-10]
2. gpr37l1b ENSDARG00000056774, ENSDARG00000114481 143 1.671 0.928 - - - - - 0.743 - - G protein-coupled receptor 37 like 1b [Source:ZFIN;Acc:ZDB-GENE-081104-324]
3. fam43b ENSDARG00000070222 92 1.624 0.904 - - - - - - 0.720 - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
4. hdhd1 hdhd1 395 1.584 - 0.853 - - - - 0.731 - -
5. PLA2R1 ENSDARG00000077474 45 1.536 - - - - - 0.791 - 0.745 - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
6. asb16 ENSDARG00000056468, ENSDARG00000110292 126 1.486 0.771 - 0.715 - - - - - - ankyrin repeat and SOCS box containing 16 [Source:ZFIN;Acc:ZDB-GENE-031031-3]
7. zgc:172121 ENSDARG00000034430, ENSDARG00000116650 81 1.432 0.727 - - - - 0.705 - - - zgc:172121 [Source:ZFIN;Acc:ZDB-GENE-030131-9545]
8. ctnnd2a ENSDARG00000062415, ENSDARG00000111725 262 0.949 0.949 - - - - - - - - catenin (cadherin-associated protein), delta 2a [Source:ZFIN;Acc:ZDB-GENE-030616-60]
9. scn1lab ENSDARG00000062744 155 0.948 0.948 - - - - - - - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
10. il2rga ENSDARG00000068858, ENSDARG00000110645 32 0.943 0.943 - - - - - - - - interleukin 2 receptor, gamma a [Source:ZFIN;Acc:ZDB-GENE-080402-1]
11. emilin2a ENSDARG00000061196 57 0.939 0.939 - - - - - - - - elastin microfibril interfacer 2a [Source:ZFIN;Acc:ZDB-GENE-060503-247]
12. si:dkey-163m14.10 si:dkey-163m14.10 33 0.937 0.937 - - - - - - - -
13. si:ch211-220i18.4 ENSDARG00000030262 10 0.937 0.937 - - - - - - - - si:ch211-220i18.4 [Source:ZFIN;Acc:ZDB-GENE-090312-151]
14. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 0.928 0.928 - - - - - - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
15. cpne5 cpne5 16 0.928 0.928 - - - - - - - -
16. si:dkey-14d8.19 si:dkey-14d8.19 12 0.928 0.928 - - - - - - - -
17. C20H2orf70 C20H2orf70 8 0.928 0.928 - - - - - - - -
18. si:ch211-167j6.3 ENSDARG00000095504 5 0.928 0.928 - - - - - - - - si:ch211-167j6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-145]
19. si:ch211-222k6.2 ENSDARG00000087046 144 0.928 0.928 - - - - - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
20. six6a ENSDARG00000025187 40 0.928 0.928 - - - - - - - - SIX homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040426-1282]
21. TRIM46 TRIM46 73 0.928 0.928 - - - - - - - -
22. WDPCP ENSDARG00000074590 35 0.928 0.928 - - - - - - - - WD repeat containing planar cell polarity effector [Source:ZFIN;Acc:ZDB-GENE-100405-4]
23. chrna9 ENSDARG00000054680 4 0.928 0.928 - - - - - - - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
24. CR391962.1 CR391962.1 31 0.928 0.928 - - - - - - - -
25. gpr12 ENSDARG00000062934 7 0.928 0.928 - - - - - - - - G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]
26. taar16a ENSDARG00000054237 1 0.928 0.928 - - - - - - - - trace amine associated receptor 16a [Source:ZFIN;Acc:ZDB-GENE-100514-1]
27. prpf4 ENSDARG00000067639, ENSDARG00000114457, ENSDARG00000114653 10 0.928 0.928 - - - - - - - - PRP4 pre-mRNA processing factor 4 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-5143]
28. GALNT9 ENSDARG00000006832 120 0.928 0.928 - - - - - - - - polypeptide N-acetylgalactosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060526-21]
29. AL935272.2 AL935272.2 37 0.928 0.928 - - - - - - - -
30. zgc:114037_4 57 0.928 0.928 - - - - - - - - zgc:114037
31. EPM2AIP1 EPM2AIP1 4 0.928 0.928 - - - - - - - -
32. cryaba ENSDARG00000042621 2 0.928 0.928 - - - - - - - - crystallin, alpha B, a [Source:ZFIN;Acc:ZDB-GENE-991119-2]
33. 5S_rRNA_31 5S_rRNA_31 3 0.928 0.928 - - - - - - - -
34. fam178a fam178a 29 0.928 0.928 - - - - - - - -
35. nog2 ENSDARG00000043066 233 0.928 0.928 - - - - - - - - noggin 2 [Source:ZFIN;Acc:ZDB-GENE-991206-14]
36. si:ch211-133l5.7 ENSDARG00000095633 3 0.928 0.928 - - - - - - - - si:ch211-133l5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-117]
37. KCNT2 ENSDARG00000075812 23 0.928 0.928 - - - - - - - - potassium channel, subfamily T, member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-783]
38. mis18a ENSDARG00000035333 555 0.928 0.928 - - - - - - - - MIS18 kinetochore protein A [Source:ZFIN;Acc:ZDB-GENE-091204-314]
39. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 0.928 0.928 - - - - - - - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
40. aspscr1_1 ENSDARG00000105321 4 0.928 0.928 - - - - - - - - alveolar soft part sarcoma chromosome region, candidate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-31]
41. PLEKHG4B PLEKHG4B 1 0.928 0.928 - - - - - - - -
42. ubr1 ENSDARG00000060480 71 0.928 0.928 - - - - - - - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
43. zgc:172128 ENSDARG00000101883, ENSDARG00000104208 28 0.928 0.928 - - - - - - - - zgc:172128 [Source:ZFIN;Acc:ZDB-GENE-080220-2]
44. si:dkeyp-67a8.4 ENSDARG00000090099, ENSDARG00000092823 1 0.928 0.928 - - - - - - - - si:dkeyp-67a8.4 [Source:ZFIN;Acc:ZDB-GENE-070912-666]
45. si:ch211-122l24.2 si:ch211-122l24.2 1 0.928 0.928 - - - - - - - -
46. CNTNAP1 ENSDARG00000074524 73 0.928 0.928 - - - - - - - - contactin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030916-2]
47. BX897747.1 ENSDARG00000117746 11 0.928 0.928 - - - - - - - -
48. zgc:112965 ENSDARG00000007787 5 0.928 0.928 - - - - - - - - zgc:112965 [Source:ZFIN;Acc:ZDB-GENE-050522-10]
49. fam73b 76 0.928 0.928 - - - - - - - - family with sequence similarity 73, member B
50. TMEM100_1 TMEM100_1 44 0.928 0.928 - - - - - - - -
51. si:ch211-197k17.3 ENSDARG00000096214 2 0.928 0.928 - - - - - - - - si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
52. bcat1 ENSDARG00000045568 39 0.928 0.928 - - - - - - - - branched chain amino-acid transaminase 1, cytosolic [Source:ZFIN;Acc:ZDB-GENE-030131-9358]
53. CT583709.2 CT583709.2 55 0.928 0.928 - - - - - - - -
54. zgc:174710 13 0.928 0.928 - - - - - - - - zgc:174710
55. KCNIP4 ENSDARG00000088100 86 0.928 0.928 - - - - - - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
56. CABZ01069020.1 ENSDARG00000105806 19 0.928 0.928 - - - - - - - - si:cabz01069020.1 [Source:NCBI gene;Acc:100332930]
57. HIST2H4B HIST2H4B 9 0.928 0.928 - - - - - - - -
58. efr3ba ENSDARG00000033516 19 0.928 0.928 - - - - - - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
59. CLTCL1_1 CLTCL1_1 1 0.928 0.928 - - - - - - - -
60. BSN_1 BSN_1 21 0.928 0.928 - - - - - - - -
61. BX248120.1 BX248120.1 4 0.928 0.928 - - - - - - - -
62. si:dkey-238o14.1 ENSDARG00000100099 1 0.928 0.928 - - - - - - - - si:dkey-238o14.1 [Source:ZFIN;Acc:ZDB-GENE-081103-10]
63. ndrg1b ENSDARG00000010420 116 0.928 0.928 - - - - - - - - N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
64. gabrr2a ENSDARG00000052982 21 0.928 0.928 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 2a [Source:ZFIN;Acc:ZDB-GENE-060825-164]
65. CU896645.1 CU896645.1 10 0.928 0.928 - - - - - - - -
66. zfp64 ENSDARG00000061147 44 0.928 0.928 - - - - - - - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
67. ncanb ENSDARG00000005783 22 0.928 0.928 - - - - - - - - neurocan b [Source:ZFIN;Acc:ZDB-GENE-050208-586]
68. snapc1a ENSDARG00000029569 25 0.928 0.928 - - - - - - - - small nuclear RNA activating complex, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1031]
69. BTBD17_1 BTBD17_1 42 0.928 0.928 - - - - - - - -
70. BX469910.2 ENSDARG00000096127 6 0.928 0.928 - - - - - - - -
71. pex10 ENSDARG00000041511 52 0.928 0.928 - - - - - - - - peroxisomal biogenesis factor 10 [Source:ZFIN;Acc:ZDB-GENE-041010-71]
72. GABRA3 ENSDARG00000090883 5 0.928 0.928 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
73. DNER ENSDARG00000061031 123 0.928 0.928 - - - - - - - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
74. spata20 ENSDARG00000013880 46 0.928 0.928 - - - - - - - - spermatogenesis associated 20 [Source:ZFIN;Acc:ZDB-GENE-030131-7269]
75. lyve1a ENSDARG00000075833 25 0.928 0.928 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1a [Source:ZFIN;Acc:ZDB-GENE-031118-138]
76. zgc:165409_1 ENSDARG00000091385 65 0.928 0.928 - - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
77. pdcl ENSDARG00000009480 12 0.928 0.928 - - - - - - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
78. pygl ENSDARG00000002197 192 0.928 0.928 - - - - - - - - phosphorylase, glycogen, liver [Source:ZFIN;Acc:ZDB-GENE-041205-1]
79. SLC2A13 SLC2A13 74 0.928 0.928 - - - - - - - -
80. chrm2a ENSDARG00000098612 5 0.928 0.928 - - - - - - - - cholinergic receptor, muscarinic 2a [Source:ZFIN;Acc:ZDB-GENE-030314-1]
81. SNORA63 SNORA63 7 0.928 0.928 - - - - - - - -
82. tceanc2 ENSDARG00000062919 32 0.928 0.928 - - - - - - - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
83. ogfrl1 ENSDARG00000061223 64 0.927 0.927 - - - - - - - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
84. LRFN5_1 LRFN5_1 96 0.905 0.905 - - - - - - - -
85. si:dkey-202b22.6 ENSDARG00000045552 190 0.904 0.904 - - - - - - - - si:dkey-202b22.6 [Source:ZFIN;Acc:ZDB-GENE-041210-176]
86. zbtb20 ENSDARG00000005586 195 0.901 0.901 - - - - - - - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
87. disp1 ENSDARG00000044417 603 0.9 - 0.900 - - - - - - - dispatched homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030911-7]
88. ptrh2 ENSDARG00000077339, ENSDARG00000111027 211 0.9 - 0.900 - - - - - - - peptidyl-tRNA hydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-163]
89. si:dkey-176f19.6 si:dkey-176f19.6 373 0.899 - 0.899 - - - - - - -
90. flrt1b ENSDARG00000075597 465 0.898 0.898 - - - - - - - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
91. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 0.896 0.896 - - - - - - - - gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
92. Metazoa_SRP_19 Metazoa_SRP_19 17 0.893 0.893 - - - - - - - -
93. si:dkey-17m8.2 ENSDARG00000035797 40 0.892 0.892 - - - - - - - - si:dkey-17m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-234]
94. TENM2_1 ENSDARG00000037122 67 0.892 0.892 - - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
95. si:ch73-91k6.8 si:ch73-91k6.8 37 0.892 0.892 - - - - - - - -
96. WNK2 ENSDARG00000104989 429 0.891 0.891 - - - - - - - - WNK lysine deficient protein kinase 2 [Source:ZFIN;Acc:ZDB-GENE-160114-3]
97. egf ENSDARG00000052739, ENSDARG00000114581 141 0.887 - - - - - - 0.887 - - epidermal growth factor [Source:ZFIN;Acc:ZDB-GENE-070922-1]
98. tfr1a ENSDARG00000101322 105 0.886 - - - - - - 0.886 - - transferrin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-041220-1]
99. ska1 ENSDARG00000039354 814 0.885 0.885 - - - - - - - - spindle and kinetochore associated complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040718-334]
100. coro1b ENSDARG00000008660 1220 0.885 - 0.885 - - - - - - - coronin, actin binding protein, 1B [Source:ZFIN;Acc:ZDB-GENE-040123-3]

There are 628 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA