Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for actr1

Gene Name Gene ID Reads Annotation
actr1 ENSDARG00000011611 3879 ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]










Genes with expression patterns similar to actr1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. actr1 ENSDARG00000011611 3879 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
2. vat1 ENSDARG00000056481, ENSDARG00000111382 7389 3.287 - 0.759 - - 0.948 - 0.737 - 0.843 vesicle amine transport 1 [Source:ZFIN;Acc:ZDB-GENE-030616-178]
3. tmpoa ENSDARG00000007315 3638 3.159 - - - - 0.979 0.731 0.741 0.708 - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
4. atf7ip ENSDARG00000069619 5495 3.007 - 0.731 - - - - 0.778 0.748 0.750 activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
5. marcksa ENSDARG00000004049 2518 2.976 - 0.762 0.740 - - 0.752 0.722 - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
6. ANKRD50 ENSDARG00000045666 1756 2.611 - - - - 0.951 - 0.760 - 0.900 ankyrin repeat domain 50 [Source:HGNC Symbol;Acc:HGNC:29223]
7. ubr5 ENSDARG00000018192 9267 2.523 - 0.798 - - 0.870 - 0.855 - - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
8. dctn3 ENSDARG00000041363 3351 2.508 - 0.766 - - 0.948 - 0.794 - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
9. prmt1 ENSDARG00000010246 11311 2.494 - 0.862 - - - 0.829 - 0.803 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
10. rbm25 rbm25 3629 2.465 - - - - 0.948 0.737 0.780 - -
11. efnb3b ENSDARG00000042277 5823 2.451 - 0.793 - - 0.904 - 0.754 - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
12. SERBP1 SERBP1 9276 2.448 - - - - 0.868 - 0.800 - 0.780
13. znf280d ENSDARG00000077013 1387 2.432 - 0.736 - - 0.963 - - 0.733 - zinc finger protein 280D [Source:ZFIN;Acc:ZDB-GENE-030131-2260]
14. pik3r3b ENSDARG00000034409, ENSDARG00000113215, ENSDARG00000117028 3213 2.424 - - - - - 0.862 0.727 - 0.835 phosphoinositide-3-kinase, regulatory subunit 3b (gamma) [Source:ZFIN;Acc:ZDB-GENE-040426-743]
15. FP016176.1 FP016176.1 7030 2.41 - 0.847 - - - 0.801 0.762 - -
16. prcc ENSDARG00000063252 2065 2.406 - - - - - 0.796 0.724 - 0.886 proline rich mitotic checkpoint control factor [Source:ZFIN;Acc:ZDB-GENE-070717-1]
17. nsd1a ENSDARG00000060016 2974 2.393 - - - - - 0.789 - 0.734 0.870 nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
18. ANKRD11 ENSDARG00000051886 10024 2.37 - 0.765 - - - 0.838 0.767 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
19. hk1 ENSDARG00000039452, ENSDARG00000110447, ENSDARG00000112051 5026 2.369 - 0.755 - - - - 0.714 - 0.900 hexokinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2848]
20. ssbp4 ENSDARG00000056483 10196 2.359 - 0.704 - - - 0.872 0.783 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
21. znf292b ENSDARG00000043973 3791 2.349 - - - - 0.795 0.704 0.850 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
22. foxo3b ENSDARG00000042904 5046 2.347 - 0.726 - - - 0.878 0.743 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
23. CACFD1 ENSDARG00000090818 1298 2.34 0.731 - - - - - 0.782 0.827 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
24. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.332 - 0.716 - - - 0.753 0.863 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
25. rbb4 rbb4 15541 2.325 - - - - - 0.794 0.731 0.800 -
26. zmiz1a ENSDARG00000074502 3920 2.309 - 0.869 - - - 0.732 0.708 - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
27. ddx19 ENSDARG00000005699 4602 2.269 - - - - - 0.750 0.805 0.714 - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
28. wu:fb17g07 wu:fb17g07 10567 2.258 0.700 - - - - 0.746 0.812 - -
29. pelo ENSDARG00000055477 1927 2.242 - 0.805 0.714 - - - - 0.723 - pelota mRNA surveillance and ribosome rescue factor [Source:ZFIN;Acc:ZDB-GENE-040426-1074]
30. zgc:123105 ENSDARG00000003127 3061 2.218 - 0.701 - - - 0.796 0.721 - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
31. pl10 pl10 10795 2.217 - 0.738 - - - 0.769 0.710 - -
32. dpysl3 ENSDARG00000002587 4381 2.214 - - 0.754 - - 0.710 0.750 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
33. IWS1 2428 2.2 - - 0.741 - - 0.750 - 0.709 - IWS1, SUPT6H interacting protein, transcript variant X2
34. lsm14ab ENSDARG00000100553 3837 2.187 - - - - - 0.758 0.705 0.724 - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
35. hoxa9a ENSDARG00000105013 1509 2.185 - 0.726 - - - - 0.708 - 0.751 homeobox A9a [Source:ZFIN;Acc:ZDB-GENE-000823-1]
36. tle2 5014 2.169 0.704 0.707 - - - - 0.758 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
37. psmd12 ENSDARG00000052377 7763 2.168 - 0.711 - - - 0.722 - 0.735 - proteasome 26S subunit, non-ATPase 12 [Source:ZFIN;Acc:ZDB-GENE-030131-617]
38. CABZ01088509.1 CABZ01088509.1 1213 1.86 - - - - 0.978 - - - 0.882
39. rbpja ENSDARG00000003398 1309 1.86 - - - - 0.961 - - - 0.899 recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]
40. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.835 - 0.855 - - 0.980 - - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
41. arf6b ENSDARG00000052928 4585 1.826 - - - - 0.948 - - - 0.878 ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
42. nmt1a ENSDARG00000052966 5918 1.814 - 0.856 - - 0.958 - - - - N-myristoyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-050522-477]
43. ipo4 ENSDARG00000041493 1578 1.812 - 0.856 - - 0.956 - - - - importin 4 [Source:ZFIN;Acc:ZDB-GENE-041014-307]
44. esd ENSDARG00000019496 3192 1.785 - 0.831 - - 0.954 - - - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
45. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.772 - - - - 0.951 - - - 0.821 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
46. gab1 ENSDARG00000037018 1489 1.759 - - 0.798 - 0.961 - - - - GRB2-associated binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2674]
47. minos1 ENSDARG00000101619 5273 1.756 - 0.833 - - 0.923 - - - - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
48. CT955967.1 ENSDARG00000099956 2885 1.755 - - - - 0.980 - - 0.775 -
49. si:ch211-197h24.6 ENSDARG00000091631 1933 1.75 - 0.790 - - 0.960 - - - - si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
50. fam89a ENSDARG00000079979 4375 1.745 - - - - 0.946 - - - 0.799 family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
51. znf865 ENSDARG00000036698 15532 1.741 - - - - - 0.889 0.852 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
52. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.734 - - - - 0.922 - 0.812 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
53. klc2 3058 1.727 - - - - - 0.811 - - 0.916 kinesin light chain 2
54. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 1.726 - 0.792 - - 0.934 - - - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
55. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 1.724 - - - - 0.961 - 0.763 - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
56. impdh1b ENSDARG00000029524 7472 1.722 - 0.881 - - - - - - 0.841 IMP (inosine 5'-monophosphate) dehydrogenase 1b [Source:ZFIN;Acc:ZDB-GENE-030219-206]
57. znf207a ENSDARG00000015538 2630 1.721 - - - - 0.983 - 0.738 - - zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
58. chd4b ENSDARG00000025789 14299 1.719 - 0.832 - - 0.887 - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
59. ssbp3b ENSDARG00000030155 7163 1.71 - - - - 0.890 - 0.820 - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
60. eif3g ENSDARG00000016889 10367 1.706 - - - - - - 0.779 - 0.927 eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
61. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 1.7 - - - - 0.961 0.739 - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
62. hadhb ENSDARG00000102055 9700 1.695 - 0.807 - - 0.888 - - - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
63. usp40 ENSDARG00000071197 825 1.691 - 0.733 - - 0.958 - - - - ubiquitin specific peptidase 40 [Source:ZFIN;Acc:ZDB-GENE-060518-5]
64. eif1axa ENSDARG00000029003, ENSDARG00000114914 3973 1.688 - - - - 0.920 - - 0.768 - eukaryotic translation initiation factor 1A X-linked a [Source:ZFIN;Acc:ZDB-GENE-041010-185]
65. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 1.687 - 0.728 - - 0.959 - - - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
66. epha4b ENSDARG00000011600 3110 1.685 - - - - 0.965 0.720 - - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
67. smarce1 ENSDARG00000016871 9628 1.684 - - - - - 0.842 0.842 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
68. itm2ca ENSDARG00000043448 1265 1.682 - - - - 0.957 0.725 - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
69. tmem198a ENSDARG00000042115 1694 1.682 - - - - 0.982 0.700 - - - transmembrane protein 198a [Source:ZFIN;Acc:ZDB-GENE-070912-716]
70. PACS1_1 PACS1_1 1264 1.681 - - - - - - 0.818 - 0.863
71. top2a ENSDARG00000024488 4273 1.672 - - - - 0.935 - 0.737 - - DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
72. smarca4 smarca4 9726 1.671 - - - - - 0.866 0.805 - -
73. kdm1a ENSDARG00000060679 6152 1.67 - - - - - - 0.822 0.848 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
74. stmn1b ENSDARG00000033655 9491 1.667 - - - - 0.941 - 0.726 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
75. tra2a ENSDARG00000007863 4449 1.662 - - - - 0.947 - 0.715 - - transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
76. zgc:110699 ENSDARG00000017474 381 1.661 - - - - 0.960 0.701 - - - zgc:110699 [Source:ZFIN;Acc:ZDB-GENE-050522-487]
77. arid2 ENSDARG00000007413 4413 1.66 - 0.896 - - - - 0.764 - - AT rich interactive domain 2 (ARID, RFX-like) [Source:ZFIN;Acc:ZDB-GENE-030131-6311]
78. RNF5 ENSDARG00000075606 1730 1.659 - 0.795 - - - - - - 0.864 ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
79. psmc4 ENSDARG00000027099, ENSDARG00000109415 6643 1.655 - - - - - 0.748 - - 0.907 proteasome 26S subunit, ATPase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5083]
80. tcf7l1b ENSDARG00000007369 2785 1.652 - 0.804 - - - - 0.848 - - transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
81. phactr4a ENSDARG00000015552 1315 1.65 - 0.812 - - - - - - 0.838 phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
82. whsc1l1 8544 1.646 - - - - - 0.894 0.752 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
83. CWC15 ENSDARG00000013382 8969 1.645 - - - - - 0.744 - - 0.901 CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
84. nucks1a ENSDARG00000078473 28285 1.64 - 0.773 - - - 0.867 - - - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
85. mcm5 ENSDARG00000019507 6407 1.64 - 0.819 - - 0.821 - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
86. u2surp ENSDARG00000061490 2814 1.639 - - - - - 0.753 - - 0.886 U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]
87. adnp2b ENSDARG00000028431 4683 1.63 - 0.763 - - - - 0.867 - - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
88. chd7 ENSDARG00000075211 12085 1.622 - - - - - 0.846 0.776 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
89. arhgap5 ENSDARG00000061294 2228 1.621 - 0.798 - - - - - - 0.823 Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
90. h2afva ENSDARG00000068820 16427 1.621 - - - - - 0.891 0.730 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
91. rybpa ENSDARG00000037773 904 1.62 - - - - - - 0.795 0.825 - RING1 and YY1 binding protein a [Source:ZFIN;Acc:ZDB-GENE-030424-3]
92. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.619 - - - - - 0.847 0.772 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
93. lap3 ENSDARG00000061981 1188 1.618 - 0.791 - - - - - - 0.827 leucine aminopeptidase 3 [Source:ZFIN;Acc:ZDB-GENE-060719-1]
94. gfra1b ENSDARG00000102564 821 1.618 - - - - - 0.886 0.732 - - gdnf family receptor alpha 1b [Source:ZFIN;Acc:ZDB-GENE-010226-3]
95. slc25a23a ENSDARG00000005690 824 1.617 - 0.787 - - - - - - 0.830 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23a [Source:ZFIN;Acc:ZDB-GENE-121214-154]
96. elavl1 11672 1.617 - - - - - 0.810 - - 0.807 ELAV like RNA binding protein 1, transcript variant X3
97. CR847925.1 CR847925.1 835 1.617 - - - - - - - 0.766 0.851
98. Mar-07 Mar-07 2926 1.617 - 0.906 - - - - - 0.711 -
99. cstf1 ENSDARG00000044820 1663 1.617 - - - - - - - 0.725 0.892 cleavage stimulation factor, 3' pre-RNA, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2958]
100. ssb ENSDARG00000029252 3394 1.615 - 0.810 - - - - - 0.805 - Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]

There are 2123 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA