Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for actn3a

Gene Name Gene ID Reads Annotation
actn3a ENSDARG00000013755, ENSDARG00000111128 22706 actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]










Genes with expression patterns similar to actn3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
2. eef2l2 ENSDARG00000035256 6815 5.231 0.846 - 0.848 0.895 0.772 0.941 - 0.929 - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
3. tpma ENSDARG00000033683 752432 5.137 0.878 - 0.949 0.910 0.915 0.754 - 0.731 - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
4. pgam2 ENSDARG00000057571 23387 4.998 0.878 - 0.758 0.899 0.833 0.848 - 0.782 - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
5. actn3b ENSDARG00000001431 15747 4.969 0.906 - 0.870 0.900 0.798 0.717 - 0.778 - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
6. casq2 ENSDARG00000008982 21802 4.609 0.945 0.985 0.877 0.929 0.873 - - - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
7. pvalb4 ENSDARG00000024433 35736 4.46 0.916 - 0.849 0.924 0.839 0.932 - - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
8. mybpc2b ENSDARG00000021265 9618 4.385 0.885 - 0.812 0.824 0.874 0.990 - - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
9. atp2a1 ENSDARG00000020574 291561 4.379 0.905 - 0.924 0.919 0.928 - - 0.703 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
10. desma ENSDARG00000058656 30292 4.334 0.868 - 0.878 0.826 0.870 - - - 0.892 desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
11. srl ENSDARG00000104587 11126 4.292 0.949 - 0.838 0.878 0.774 0.853 - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
12. myl1 ENSDARG00000014196 98943 4.218 0.777 - 0.927 0.722 0.903 - - - 0.889 myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
13. tmem38a ENSDARG00000024047 41883 4.21 0.885 - 0.911 0.850 0.769 - - - 0.795 transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
14. actc1b ENSDARG00000099197 324665 4.206 0.812 - 0.893 0.860 0.918 - - 0.723 - actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
15. aldoab ENSDARG00000034470 88942 4.149 0.889 - 0.710 0.836 0.856 0.858 - - - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
16. si:ch211-114n24.7 si:ch211-114n24.7 2544 3.987 0.784 - 0.842 0.893 0.702 0.766 - - -
17. SPEG SPEG 4017 3.986 0.798 - 0.840 0.810 0.744 0.794 - - -
18. prx ENSDARG00000017246 6183 3.981 0.843 - 0.774 0.790 0.741 0.833 - - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
19. myhz1.3 ENSDARG00000067997 155509 3.569 0.891 - 0.898 0.866 0.914 - - - - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
20. tnni2a.4 ENSDARG00000029069 122344 3.543 0.932 - 0.858 0.813 0.940 - - - - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
21. mylz3 ENSDARG00000017441 303597 3.54 0.855 - 0.907 0.821 0.957 - - - - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
22. ckmb ENSDARG00000040565 505935 3.528 0.802 - 0.933 0.866 0.927 - - - - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
23. ckma ENSDARG00000035327, ENSDARG00000114671 418792 3.526 0.834 - 0.904 0.871 0.917 - - - - creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
24. si:ch211-226o13.2 84923 3.469 - - 0.930 0.891 0.906 - - 0.742 - si:ch211-226o13.2
25. myoz1b ENSDARG00000071445 13381 3.466 0.905 - 0.875 0.866 0.820 - - - - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
26. tnnt3a ENSDARG00000030270 112506 3.45 0.885 - 0.898 0.793 0.874 - - - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
27. CR847973.1 ENSDARG00000115516 8754 3.418 0.900 - 0.864 0.877 0.777 - - - -
28. mylpfb ENSDARG00000002589 70167 3.408 - - 0.890 0.869 0.868 0.781 - - - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
29. si:ch211-156j16.1 ENSDARG00000092035 7441 3.403 0.905 - 0.768 0.819 - 0.911 - - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
30. SYNPO2L SYNPO2L 6697 3.398 0.872 - 0.879 0.836 0.811 - - - -
31. neb ENSDARG00000032630, ENSDARG00000109273 19493 3.385 0.858 - 0.854 0.917 0.756 - - - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
32. sar1ab ENSDARG00000033320 3984 3.374 0.823 - 0.873 0.885 0.793 - - - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
33. ak1 ENSDARG00000001950 26964 3.354 0.717 - - 0.905 0.896 - - 0.836 - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
34. ttnb ttnb 73721 3.351 - - 0.863 0.909 0.868 - - - 0.711
35. CR354540.2 ENSDARG00000117517 18452 3.351 0.848 - 0.846 0.813 0.844 - - - -
36. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 3.339 0.884 - 0.890 0.812 0.753 - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
37. tnnt2d ENSDARG00000002988 7590 3.33 0.847 - 0.768 0.881 0.834 - - - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
38. acta1b ENSDARG00000055618 195597 3.319 0.897 - 0.920 0.726 0.776 - - - - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
39. hhatla ENSDARG00000039051 6598 3.31 0.876 - 0.852 0.870 0.712 - - - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
40. klhl31 ENSDARG00000039066 13656 3.29 - 0.898 0.829 0.800 0.763 - - - - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
41. tnnt3b ENSDARG00000068457 101827 3.282 - - 0.864 0.855 0.822 0.741 - - - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
42. rtn2a ENSDARG00000016088 12184 3.266 0.869 - 0.815 0.761 0.821 - - - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
43. tpi1b ENSDARG00000040988, ENSDARG00000113061 29752 3.251 - - 0.873 0.876 0.706 - 0.796 - - triosephosphate isomerase 1b [Source:ZFIN;Acc:ZDB-GENE-020416-4]
44. tgm2a ENSDARG00000070157 4516 3.248 0.907 - 0.878 0.713 0.750 - - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
45. gapdh ENSDARG00000043457 68684 3.238 0.765 - 0.850 0.867 0.756 - - - - glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
46. zgc:92518 ENSDARG00000016343 3837 3.182 0.926 - 0.749 0.742 0.765 - - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
47. EHBP1L1 EHBP1L1 2500 3.169 0.864 - 0.792 0.805 0.708 - - - -
48. NRAP ENSDARG00000009341 3565 3.156 0.869 - 0.747 0.761 - - - - 0.779 nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
49. eno3 ENSDARG00000039007 11355 3.156 - - 0.717 0.858 0.712 - - 0.869 - enolase 3, (beta, muscle) [Source:ZFIN;Acc:ZDB-GENE-031006-5]
50. sgcd ENSDARG00000098573 4980 3.154 0.819 - 0.737 - 0.772 0.826 - - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
51. ryr3 ENSDARG00000071331 6795 3.118 0.761 - 0.804 0.780 0.773 - - - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
52. pkmb ENSDARG00000099860 25094 3.1 0.839 - - 0.726 0.717 0.818 - - - pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
53. mybphb ENSDARG00000003081 5208 2.852 - - 0.708 0.710 0.715 - - 0.719 - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
54. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 2.701 0.882 - 0.906 - 0.913 - - - - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
55. murcb murcb 13655 2.575 0.927 - 0.753 0.895 - - - - -
56. vcl vcl 6667 2.55 0.857 - 0.867 - 0.826 - - - -
57. ttna ttna 101197 2.546 0.784 - 0.888 - 0.874 - - - -
58. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.537 0.775 - 0.929 - 0.833 - - - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
59. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 2.527 0.919 - 0.775 0.833 - - - - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
60. pvalb2 ENSDARG00000002768, ENSDARG00000114085 333278 2.501 0.922 - 0.777 - 0.802 - - - - parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
61. nexn ENSDARG00000057317 10972 2.497 0.890 - 0.828 0.779 - - - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
62. murca murca 6614 2.488 0.910 - 0.810 - 0.768 - - - -
63. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 2.479 0.829 - 0.824 0.826 - - - - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
64. tmod4 ENSDARG00000020890 17436 2.474 - - 0.876 0.852 0.746 - - - - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
65. TMPO TMPO 3264 2.473 0.890 - 0.768 - - 0.815 - - -
66. trdn ENSDARG00000041779 4283 2.452 0.851 - 0.860 - 0.741 - - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
67. cfl2 ENSDARG00000014106 8051 2.447 0.778 - 0.895 0.774 - - - - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
68. METTL21C METTL21C 1717 2.433 0.844 - 0.804 0.785 - - - - -
69. si:dkeyp-113d7.4 si:dkeyp-113d7.4 33767 2.432 0.745 - - - - - - 0.789 0.898
70. mdh1b ENSDARG00000018008 3196 2.423 0.880 - 0.797 0.746 - - - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
71. tmem161a ENSDARG00000012790 16094 2.418 0.909 - 0.735 0.774 - - - - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
72. jph2 ENSDARG00000028625 6706 2.412 0.823 - - 0.819 0.770 - - - - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
73. tnni1al 8272 2.405 0.819 - 0.824 0.762 - - - - - troponin I, skeletal, slow like, transcript variant X1
74. smyd2b ENSDARG00000005629 8181 2.402 0.857 - - 0.711 0.834 - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
75. pbxip1a ENSDARG00000071015 4960 2.379 0.863 - 0.729 0.787 - - - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
76. PTPLA PTPLA 4044 2.373 0.836 - 0.801 0.736 - - - - -
77. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.371 0.871 - 0.757 0.743 - - - - - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
78. MYOM1 MYOM1 3870 2.37 0.783 - 0.721 - - 0.866 - - -
79. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 2.37 0.815 - - 0.755 0.800 - - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
80. ldb3b ENSDARG00000099974 33615 2.364 0.752 - 0.894 - - - 0.718 - - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
81. znf106a ENSDARG00000016651 6049 2.36 0.816 - - 0.758 0.786 - - - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
82. AIMP1 ENSDARG00000060036 4136 2.353 0.873 - 0.752 0.728 - - - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
83. ryr1b ENSDARG00000023797 5693 2.348 - - 0.818 0.744 0.786 - - - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
84. hhatlb ENSDARG00000005139 6674 2.342 0.821 - 0.749 - 0.772 - - - - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
85. adss ENSDARG00000002071 5497 2.341 0.780 - 0.798 0.763 - - - - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
86. BX294434.1 ENSDARG00000061272 6493 2.327 0.853 - 0.769 0.705 - - - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
87. ca2 ENSDARG00000014488 10141 2.315 - - 0.840 - 0.732 - - 0.743 - carbonic anhydrase II [Source:ZFIN;Acc:ZDB-GENE-031219-5]
88. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.311 0.772 - 0.808 0.731 - - - - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
89. nid1a ENSDARG00000068710 3948 2.307 0.782 - - 0.722 0.803 - - - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
90. tnnc2 ENSDARG00000070835, ENSDARG00000111155 259313 2.301 0.788 - - 0.781 - - - 0.732 - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
91. rp42-pen rp42-pen 3395 2.28 - - 0.752 0.801 0.727 - - - -
92. alpk2 ENSDARG00000079637 1483 2.262 0.823 - - 0.736 0.703 - - - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
93. pgk1 ENSDARG00000054191 7652 2.262 - - 0.746 0.737 0.779 - - - - phosphoglycerate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2711]
94. lamb2 ENSDARG00000002084 3265 2.26 0.745 - 0.783 - 0.732 - - - - laminin, beta 2 (laminin S) [Source:ZFIN;Acc:ZDB-GENE-081030-4]
95. acsl1 acsl1 4216 2.227 0.704 - 0.729 0.794 - - - - -
96. si:ch211-32p8.1 si:ch211-32p8.1 3402 2.221 0.708 - 0.781 0.732 - - - - -
97. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 59212 2.213 - - 0.764 - 0.744 0.705 - - - myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
98. sgcg_1 ENSDARG00000038107 1998 2.205 0.765 - 0.723 - 0.717 - - - - sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
99. tgm1l1 ENSDARG00000102106 1437 2.165 0.754 - 0.701 - 0.710 - - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
100. pygma ENSDARG00000055518 15972 1.84 0.920 - - - 0.920 - - - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]

There are 826 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA