Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for actn1

Gene Name Gene ID Reads Annotation
actn1 ENSDARG00000007219 2919 actinin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081113-4]










Genes with expression patterns similar to actn1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. actn1 ENSDARG00000007219 2919 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actinin, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-081113-4]
2. znf185 ENSDARG00000103917 7195 2.653 - - - - - 0.886 0.919 - 0.848 zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
3. lgals3l lgals3l 3833 2.537 - 0.827 - - - 0.815 - - 0.895
4. efhd2 ENSDARG00000055759 7777 2.518 - - - - - 0.873 0.809 - 0.836 EF-hand domain family, member D2 [Source:ZFIN;Acc:ZDB-GENE-060531-152]
5. tln1 ENSDARG00000100729 5744 2.494 - - - - - 0.803 0.920 - 0.771 talin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-48]
6. dbt ENSDARG00000101561, ENSDARG00000110773 1537 2.492 - 0.824 - - - 0.740 - 0.928 - dihydrolipoamide branched chain transacylase E2 [Source:ZFIN;Acc:ZDB-GENE-050320-85]
7. cyth1a ENSDARG00000005159, ENSDARG00000076742 2796 1.858 - - - - - 0.910 - 0.948 - cytohesin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-657]
8. zgc:194839 ENSDARG00000078550 4003 1.842 - - - - - 0.883 0.959 - - zgc:194839 [Source:ZFIN;Acc:ZDB-GENE-081022-153]
9. bc2 5213 1.841 - - - - - 0.930 0.911 - - putative breast adenocarcinoma marker
10. alox12 ENSDARG00000069463 5787 1.832 - - - - - 0.910 - 0.922 - arachidonate 12-lipoxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-1452]
11. hyal2 hyal2 2205 1.827 - - - - - - - 0.937 0.890
12. pex5 ENSDARG00000070654, ENSDARG00000116156, ENSDARG00000116397 1427 1.805 - - - - - - - 0.926 0.879 peroxisomal biogenesis factor 5 [Source:ZFIN;Acc:ZDB-GENE-040426-981]
13. atp2a3 ENSDARG00000060978 1408 1.805 - - - - - - 0.854 0.951 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
14. arpc4 ENSDARG00000054063 6150 1.804 - - - - - 0.907 0.897 - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
15. itgb3a ENSDARG00000056767, ENSDARG00000115691 2556 1.799 - - - - - - 0.888 - 0.911 integrin beta 3a [Source:ZFIN;Acc:ZDB-GENE-071207-1]
16. s100v1 ENSDARG00000070427 6633 1.794 - - - - - 0.917 - - 0.877 S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
17. ajuba ENSDARG00000077842 1152 1.793 - - - - - 0.894 - - 0.899 ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
18. yipf4 ENSDARG00000030957, ENSDARG00000109994 4665 1.793 - - - - - 0.915 - 0.878 - Yip1 domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2253]
19. C2CD2 ENSDARG00000105000 2573 1.792 - - - - - 0.902 - - 0.890 C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
20. spcs1 ENSDARG00000059298 5327 1.788 - - - - - 0.859 - - 0.929 signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
21. sbds ENSDARG00000027803 846 1.787 - - - - - 0.852 - 0.935 - SBDS, ribosome maturation factor [Source:ZFIN;Acc:ZDB-GENE-040426-1116]
22. pkp3 pkp3 9767 1.786 - - - - - - 0.937 0.849 -
23. rngtt ENSDARG00000032261 833 1.785 - - - - - 0.854 - 0.931 - RNA guanylyltransferase and 5'-phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-2087]
24. yipf3 ENSDARG00000020449 3312 1.785 - - - - - 0.849 - 0.936 - Yip1 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6443]
25. ctnnd1 ENSDARG00000078233 2520 1.781 - - - - - - 0.891 - 0.890 catenin (cadherin-associated protein), delta 1 [Source:ZFIN;Acc:ZDB-GENE-110208-9]
26. fkbp8 ENSDARG00000001734 1709 1.781 - - - - - - 0.845 0.936 - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
27. magt1 ENSDARG00000058062 3903 1.776 - - - - - 0.872 - - 0.904 magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
28. lsm12a ENSDARG00000028848, ENSDARG00000115800 3499 1.774 - - - - - - 0.832 0.942 - LSM12 homolog a [Source:ZFIN;Acc:ZDB-GENE-040516-12]
29. nf2b ENSDARG00000025567 1441 1.771 - - - - - - 0.834 0.937 - neurofibromin 2b (merlin) [Source:ZFIN;Acc:ZDB-GENE-040622-3]
30. tmem104 ENSDARG00000088560 859 1.766 - - - - - - 0.832 0.934 - transmembrane protein 104 [Source:ZFIN;Acc:ZDB-GENE-070822-4]
31. alpi.1 ENSDARG00000015273 1712 1.765 - - - - - - 0.854 0.911 - alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
32. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 1.762 - - - - - 0.883 - - 0.879 isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
33. met ENSDARG00000070903 2088 1.761 - - - - - - 0.863 - 0.898 MET proto-oncogene, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-041014-1]
34. actr2a ENSDARG00000052438 5838 1.753 - - - - - 0.927 - - 0.826 ARP2 actin related protein 2a homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2894]
35. wdfy4 ENSDARG00000077009 802 1.751 - - - - - 0.819 - 0.932 - WDFY family member 4 [Source:ZFIN;Acc:ZDB-GENE-090313-322]
36. tjp2a ENSDARG00000063309 1947 1.75 - 0.812 - - - 0.938 - - - tight junction protein 2a (zona occludens 2) [Source:ZFIN;Acc:ZDB-GENE-070925-2]
37. sh3bgrl3 ENSDARG00000098075 3071 1.741 - - - - - - 0.870 - 0.871 SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
38. fam91a1 ENSDARG00000003320, ENSDARG00000116699 1566 1.738 - - - - - 0.864 0.874 - - family with sequence similarity 91, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1187]
39. zgc:85975 4738 1.735 - - - - - - 0.833 - 0.902 zgc:85975
40. s100z ENSDARG00000038729 442 1.735 - - - - - 0.847 - - 0.888 S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
41. tmem170a ENSDARG00000056628, ENSDARG00000111549 737 1.73 - - - - - 0.802 - - 0.928 transmembrane protein 170A [Source:ZFIN;Acc:ZDB-GENE-040426-1622]
42. klhl11 ENSDARG00000045130 800 1.728 - - - - - 0.817 - - 0.911 kelch-like family member 11 [Source:ZFIN;Acc:ZDB-GENE-030131-5524]
43. CFI 3801 1.724 - 0.772 - - - - 0.952 - - complement factor I
44. necap2 ENSDARG00000046002 4372 1.724 - 0.764 - - - - - 0.960 - NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
45. sertad2b ENSDARG00000055530 785 1.715 - - - - - 0.828 - - 0.887 SERTA domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030616-569]
46. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.713 - - - - - 0.895 - 0.818 - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
47. zc3h7b 2936 1.71 - - - - - - - 0.893 0.817 zinc finger CCCH-type containing 7B
48. tmem50a ENSDARG00000015757 3244 1.71 - - - - - 0.829 - 0.881 - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
49. prkar1aa ENSDARG00000076128 6565 1.705 - - - - - 0.907 - 0.798 - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
50. lrba ENSDARG00000031108 2136 1.705 - - - - - 0.817 0.888 - - LPS-responsive vesicle trafficking, beach and anchor containing [Source:ZFIN;Acc:ZDB-GENE-090311-19]
51. nhsl1b ENSDARG00000042627 3697 1.704 - - - - - - 0.833 0.871 - NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
52. arpc5a ENSDARG00000039142 5482 1.703 - 0.776 - - - 0.927 - - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
53. si:ch1073-392o20.2 ENSDARG00000102599 4172 1.702 - - - - - 0.753 - 0.949 - si:ch1073-392o20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-431]
54. fam160a1 fam160a1 1445 1.701 - 0.772 - - - 0.929 - - -
55. C2H6orf52 C2H6orf52 2847 1.701 - - - - - 0.872 0.829 - -
56. ppapdc1b ppapdc1b 2866 1.698 - - - - - 0.834 0.864 - -
57. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 1.694 - 0.862 - - - 0.832 - - - ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
58. rrbp1a ENSDARG00000013763 4723 1.691 - 0.803 - - - 0.888 - - - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
59. si:dkey-117n7.3 ENSDARG00000092944 2518 1.681 - - - - - 0.760 - 0.921 - si:dkey-117n7.3 [Source:ZFIN;Acc:ZDB-GENE-060503-143]
60. FUCA1 FUCA1 1446 1.675 - - - - - 0.795 - 0.880 -
61. itga3b ENSDARG00000012824 1872 1.671 - 0.759 - - - - 0.912 - - integrin, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-050411-55]
62. isca1 ENSDARG00000051956 5855 1.671 - - - - - - 0.898 - 0.773 iron-sulfur cluster assembly 1 [Source:ZFIN;Acc:ZDB-GENE-050626-94]
63. slc38a2 ENSDARG00000045886 2052 1.67 - - - - - - 0.801 - 0.869 solute carrier family 38, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9659]
64. EML4_1 EML4_1 8736 1.664 - - - - - 0.818 - - 0.846
65. soul2 ENSDARG00000039499 1469 1.663 - - - - - 0.872 - - 0.791 heme-binding protein soul2 [Source:ZFIN;Acc:ZDB-GENE-030131-2524]
66. C16H1orf172 C16H1orf172 909 1.663 - 0.782 - - - 0.881 - - -
67. sept9a ENSDARG00000020235 6881 1.661 - - - - - - - 0.760 0.901 septin 9a [Source:ZFIN;Acc:ZDB-GENE-030131-9187]
68. slc39a7 ENSDARG00000104451 6368 1.659 - - - - - 0.872 - - 0.787 solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
69. zgc:112263 zgc:112263 473 1.659 0.717 - - - - - - 0.942 -
70. fbp1a ENSDARG00000021366 1778 1.658 - 0.703 - - - - - - 0.955 fructose-1,6-bisphosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7171]
71. src ENSDARG00000008107 3643 1.654 - - - - - 0.779 0.875 - - v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3809]
72. APOD APOD 3404 1.653 - 0.756 - - - - 0.897 - -
73. smg7 ENSDARG00000060767 2759 1.651 - - - - - 0.841 - 0.810 - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
74. SIK1 ENSDARG00000058606 1982 1.649 - - - - - 0.787 - - 0.862 salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
75. CABZ01103862.1 ENSDARG00000109235 3223 1.648 - - - - - 0.751 - - 0.897
76. ptgdsb ptgdsb 5200 1.645 - 0.759 - - - - - - 0.886
77. hiat1a ENSDARG00000013117 607 1.64 - - - - - 0.802 0.838 - - hippocampus abundant transcript 1a [Source:ZFIN;Acc:ZDB-GENE-030131-834]
78. rhot2 ENSDARG00000056328 1123 1.639 - - - - - 0.714 - - 0.925 ras homolog family member T2 [Source:ZFIN;Acc:ZDB-GENE-051120-96]
79. fryl ENSDARG00000040001 3256 1.637 - - - - - 0.866 - - 0.771 furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
80. cldnb ENSDARG00000009544 6036 1.635 - - - - - 0.920 - 0.715 - claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
81. arcn1a ENSDARG00000002792 2847 1.624 - - - - - 0.744 - - 0.880 archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
82. cplx4b ENSDARG00000059486 3192 1.622 - 0.774 - - - - 0.848 - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
83. sepw2b 3942 1.622 - 0.759 - - - - - - 0.863 selenoprotein W, 2b
84. arf5 ENSDARG00000070472, ENSDARG00000115687 12490 1.621 - - - - - 0.730 - - 0.891 ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
85. anxa4 ENSDARG00000036456 3332 1.621 - - - - - - 0.835 0.786 - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
86. gpc4 ENSDARG00000015472 2529 1.621 - - - - - 0.750 0.871 - - glypican 4 [Source:ZFIN;Acc:ZDB-GENE-011119-1]
87. nrf1 ENSDARG00000000018 4683 1.618 - - - - - - 0.842 - 0.776 nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
88. ostc ENSDARG00000104901 16240 1.614 - - - - - 0.810 - - 0.804 oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
89. NFATC3 NFATC3 1712 1.614 - 0.710 - - - 0.904 - - -
90. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 1.613 - 0.718 - - - 0.895 - - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
91. ankrd6b ENSDARG00000029370 429 1.611 - - - - - 0.785 0.826 - - ankyrin repeat domain 6b [Source:ZFIN;Acc:ZDB-GENE-030916-4]
92. CU633999.1 ENSDARG00000098197 2880 1.61 - - - - - 0.768 0.842 - -
93. tmem45b ENSDARG00000056239 2395 1.606 0.717 - - - - 0.889 - - - transmembrane protein 45B [Source:ZFIN;Acc:ZDB-GENE-040426-1904]
94. gtf2b ENSDARG00000103578 1571 1.603 - 0.738 - - - - - - 0.865 general transcription factor IIB [Source:ZFIN;Acc:ZDB-GENE-030131-3544]
95. dhrs13a.2 ENSDARG00000111240 491 1.602 0.759 - - - - 0.843 - - - dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
96. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 1.6 - - - - - 0.797 0.803 - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
97. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.599 - - - - - 0.753 0.846 - - small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
98. dbnla ENSDARG00000008170 2129 1.598 - - - - - 0.871 0.727 - - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
99. hdac3 ENSDARG00000037514, ENSDARG00000110316 1985 1.593 - - - - - 0.712 - 0.881 - histone deacetylase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-847]
100. SEC24B ENSDARG00000071906 1018 1.589 - 0.775 - - - 0.814 - - - SEC24 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6565]

There are 1549 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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