Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for actc1a

Gene Name Gene ID Reads Annotation
actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]










Genes with expression patterns similar to actc1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. actc1a ENSDARG00000042535, ENSDARG00000076126, ENSDARG00000116925 6499 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actin, alpha, cardiac muscle 1a [Source:ZFIN;Acc:ZDB-GENE-040520-4]
2. nexn ENSDARG00000057317 10972 3.292 - 0.916 0.707 0.716 - - 0.953 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
3. myl10 ENSDARG00000062592 101207 2.882 - 0.715 0.717 - 0.746 - 0.704 - - myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
4. hypk ENSDARG00000059725 20584 2.609 0.906 - - - - 0.924 0.779 - - huntingtin interacting protein K [Source:ZFIN;Acc:ZDB-GENE-080515-6]
5. ndufv2 ENSDARG00000013044 3758 2.588 0.970 - - - - 0.880 0.738 - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
6. hspb8 ENSDARG00000058365, ENSDARG00000109236 8688 2.566 0.946 - - 0.761 - - 0.859 - - heat shock protein b8 [Source:ZFIN;Acc:ZDB-GENE-030131-2480]
7. srl ENSDARG00000104587 11126 2.561 - - - 0.734 - - 0.969 - 0.858 sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
8. klhl41b ENSDARG00000006757 10762 2.479 - - 0.770 0.754 - - 0.955 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
9. zgc:92518 ENSDARG00000016343 3837 2.451 - 0.828 - 0.706 - - 0.917 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
10. cycsb ENSDARG00000044562 40227 2.381 - - - - - - 0.820 0.727 0.834 cytochrome c, somatic b [Source:ZFIN;Acc:ZDB-GENE-040625-38]
11. txlnba ENSDARG00000020594 9385 2.379 0.716 - - 0.718 - - 0.945 - - taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
12. si:ch211-207e19.11 si:ch211-207e19.11 9604 2.244 - - 0.752 0.718 - - 0.774 - -
13. eif2a ENSDARG00000101061 3800 1.933 0.966 0.967 - - - - - - - eukaryotic translation initiation factor 2A [Source:ZFIN;Acc:ZDB-GENE-050626-52]
14. dhrs7c dhrs7c 1173 1.894 0.961 - - - - - 0.933 - -
15. ryr1b ENSDARG00000023797 5693 1.889 - - - - - 0.944 0.945 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
16. TMPO TMPO 3264 1.851 - - - - - - 0.916 - 0.935
17. casq1b ENSDARG00000018105 2643 1.846 - - - - - 0.917 0.929 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
18. atp1b3b ENSDARG00000042837 5163 1.827 - 0.875 - - - - 0.952 - - ATPase Na+/K+ transporting subunit beta 3b [Source:ZFIN;Acc:ZDB-GENE-001127-1]
19. NUAK1_1 NUAK1_1 1782 1.824 0.949 0.875 - - - - - - -
20. sf3b4 ENSDARG00000018574 7470 1.821 0.960 - - - - 0.861 - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
21. usp28 ENSDARG00000008880 1850 1.811 - - - - - 0.902 0.909 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
22. serpinf1 ENSDARG00000069048 2083 1.808 - - - - - 0.874 0.934 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
23. BX324201.1 BX324201.1 3302 1.806 - - - - - 0.874 0.932 - -
24. si:ch211-10d23.5 ENSDARG00000095510 2632 1.806 0.963 - - - - - - - 0.843 si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
25. mpi ENSDARG00000030786 3052 1.804 0.954 - - - - 0.850 - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
26. ndufa9 ndufa9 8846 1.803 0.967 - - - - - 0.836 - -
27. pdlim5b ENSDARG00000027600 4252 1.799 0.962 - - - - 0.837 - - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
28. lims2 ENSDARG00000014976 1248 1.797 - 0.878 - - - - 0.919 - - LIM and senescent cell antigen-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-56]
29. ppm1la ENSDARG00000063218 2142 1.792 0.962 - - - - - 0.830 - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
30. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 1.791 - 0.878 - - - - 0.913 - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
31. vac14 ENSDARG00000014303 941 1.789 0.932 - - - - 0.857 - - - vac14 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040912-82]
32. smtnl1 ENSDARG00000041257 7410 1.788 - 0.861 - - - - 0.927 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
33. chrnd ENSDARG00000019342 2728 1.787 - - - - - 0.889 0.898 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
34. cxcl12a ENSDARG00000037116 5433 1.787 0.977 - - - - - 0.810 - - chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]
35. plscr3b ENSDARG00000069432 8500 1.778 0.912 0.866 - - - - - - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
36. MRPL47 ENSDARG00000075743, ENSDARG00000114962 10236 1.776 0.975 - - - - - 0.801 - - mitochondrial ribosomal protein L47 [Source:ZFIN;Acc:ZDB-GENE-030219-177]
37. CHCHD3 CHCHD3 1425 1.775 - 0.876 - - - - 0.899 - -
38. necap2 ENSDARG00000046002 4372 1.77 0.929 - - - - - - - 0.841 NECAP endocytosis associated 2 [Source:ZFIN;Acc:ZDB-GENE-050522-67]
39. eprs ENSDARG00000060494 4729 1.762 - - - - - - 0.880 - 0.882 glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
40. farsb ENSDARG00000016864 6776 1.762 0.959 - - - - - 0.803 - - phenylalanyl-tRNA synthetase subunit beta [Source:ZFIN;Acc:ZDB-GENE-021206-2]
41. phb ENSDARG00000057414 9551 1.756 - - - - - 0.913 0.843 - - prohibitin [Source:ZFIN;Acc:ZDB-GENE-030131-6577]
42. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.75 - - - - - - 0.860 - 0.890 paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
43. mt-nd5 ENSDARG00000063921 21268 1.746 - - - - - 0.913 0.833 - - NADH dehydrogenase 5, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-12]
44. cnbpb ENSDARG00000070922 14606 1.744 - 0.845 - - - - 0.899 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
45. psmb4 ENSDARG00000054696 8100 1.744 - 0.870 - - - 0.874 - - - proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
46. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.742 - - - - - - 0.833 - 0.909 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
47. naa15a ENSDARG00000003213 5889 1.741 0.966 - - - - - 0.775 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
48. vapb ENSDARG00000070435, ENSDARG00000112097 6469 1.736 - - - - - - 0.845 - 0.891 VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
49. ndufab1b ENSDARG00000014915 12796 1.735 - - - - - - 0.810 - 0.925 NADH:ubiquinone oxidoreductase subunit AB1b [Source:ZFIN;Acc:ZDB-GENE-030131-4437]
50. pcmt ENSDARG00000015201 5132 1.732 - - - - - 0.888 0.844 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
51. uqcrc2a ENSDARG00000014794 3949 1.728 0.959 - - - - - 0.769 - - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
52. fermt2 ENSDARG00000020242 9351 1.728 - - - - - - 0.890 - 0.838 fermitin family member 2 [Source:ZFIN;Acc:ZDB-GENE-050506-132]
53. zgc:112484 zgc:112484 780 1.719 - - - - - 0.858 - - 0.861
54. GPR108 ENSDARG00000096651 1734 1.718 - - - - - 0.864 - - 0.854 G protein-coupled receptor 108 [Source:ZFIN;Acc:ZDB-GENE-121214-129]
55. zfand5b ENSDARG00000002271 4145 1.718 0.958 - - - - - - - 0.760 zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
56. hdac9b ENSDARG00000056642 1148 1.718 - - - - - 0.862 0.856 - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
57. txnipa ENSDARG00000036107 8863 1.716 0.932 - - - - 0.784 - - - thioredoxin interacting protein a [Source:ZFIN;Acc:ZDB-GENE-030804-10]
58. mef2cb ENSDARG00000009418 1124 1.716 - - - - - - 0.853 - 0.863 myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
59. tnni2b.1 ENSDARG00000035958 51597 1.712 - - 0.784 - - 0.928 - - - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
60. aars ENSDARG00000069142, ENSDARG00000113882 10348 1.709 - 0.811 - - - - 0.898 - - alanyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-3663]
61. txn2 ENSDARG00000034777 4071 1.705 - - - - - 0.889 0.816 - - thioredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1795]
62. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.705 - - - - - - 0.828 - 0.877 solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
63. vwde ENSDARG00000103443 5758 1.705 - - - - - - 0.944 - 0.761 von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
64. atp5j 4272 1.702 0.942 - - - - - 0.760 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
65. pdcd4a ENSDARG00000021702 7293 1.702 - - - - - - 0.781 - 0.921 programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
66. eif2s2 ENSDARG00000053047 15904 1.699 0.897 - - - - - 0.802 - - eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
67. si:ch211-208h7.4 si:ch211-208h7.4 1334 1.696 - - - - - 0.854 - - 0.842
68. zgc:153662 zgc:153662 4604 1.692 - - 0.791 - - - 0.901 - -
69. grsf1 ENSDARG00000053021 2752 1.691 - - - - - - 0.834 - 0.857 G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
70. myod1 ENSDARG00000030110 6019 1.688 - - - 0.781 - - 0.907 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
71. cox6c ENSDARG00000038577 16845 1.686 0.926 - - - - - 0.760 - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
72. klhl40a ENSDARG00000039052 2537 1.686 - - 0.763 - - - 0.923 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
73. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 1.679 0.925 - - - - - - - 0.754 transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
74. NRAP ENSDARG00000009341 3565 1.678 - - - - - - 0.916 0.762 - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
75. arpc4 ENSDARG00000054063 6150 1.678 0.928 0.750 - - - - - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
76. tnnc1b ENSDARG00000037539 13945 1.675 - - 0.726 - - - 0.949 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
77. serbp1a_1 ENSDARG00000074242 13588 1.67 0.934 - - - - - 0.736 - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
78. mef2ca ENSDARG00000029764 18547 1.665 - - 0.725 - - 0.940 - - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
79. glra4a ENSDARG00000006865, ENSDARG00000109562 1117 1.656 - - - - - - 0.955 0.701 - glycine receptor, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-010410-3]
80. rpl5b ENSDARG00000015862, ENSDARG00000109661 79810 1.655 0.740 - - - - 0.915 - - - ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
81. CU633479.5 ENSDARG00000114818 1815 1.654 - - 0.720 - - - 0.934 - -
82. cav3 ENSDARG00000024141 14906 1.654 - - - 0.702 - - 0.952 - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
83. ube2a ENSDARG00000098466 12765 1.648 0.843 - - - - - 0.805 - - ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
84. DNAJA4 ENSDARG00000051762 5657 1.646 - - 0.731 - - - 0.915 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
85. BRK1 ENSDARG00000041974 6430 1.642 0.899 - - - - - - - 0.743 BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]
86. rps17 ENSDARG00000104011 27028 1.639 0.759 - - - - 0.880 - - - ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
87. tmem182 tmem182 12589 1.635 - - - 0.707 - - 0.928 - -
88. matn3b ENSDARG00000069265 856 1.633 - - - - - - 0.755 - 0.878 matrilin 3b [Source:ZFIN;Acc:ZDB-GENE-050221-9]
89. dub ENSDARG00000059774 1026 1.632 - 0.877 - - - - 0.755 - - duboraya [Source:ZFIN;Acc:ZDB-GENE-060825-81]
90. ube2d3 ENSDARG00000038473 4096 1.631 - 0.856 - - - - 0.775 - - ubiquitin-conjugating enzyme E2D 3 [Source:ZFIN;Acc:ZDB-GENE-030131-551]
91. cox7c ENSDARG00000104537 12169 1.63 - 0.855 - - - - 0.775 - - cytochrome c oxidase subunit 7C [Source:ZFIN;Acc:ZDB-GENE-030131-8062]
92. gulp1a ENSDARG00000001733 1206 1.625 - 0.876 - - - - 0.749 - - GULP, engulfment adaptor PTB domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-21]
93. xirp2a ENSDARG00000071113 7113 1.624 - - - - - - 0.890 0.734 - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
94. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 1.62 - 0.757 - - - 0.863 - - - RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
95. PTGES3L PTGES3L 4801 1.617 - - 0.725 - - - 0.892 - -
96. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 1.617 - - 0.778 - - - 0.839 - - cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
97. rps18 ENSDARG00000100392 64615 1.609 0.796 - - - - - 0.813 - - ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
98. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.607 - - - - - 0.880 0.727 - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
99. fkbp14 ENSDARG00000040695 7725 1.599 - - - - - 0.869 - - 0.730 FK506 binding protein 14 [Source:ZFIN;Acc:ZDB-GENE-040801-210]
100. pvrl3l pvrl3l 943 1.597 - - - - - - 0.735 - 0.862

There are 1399 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA