Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for actb1

Gene Name Gene ID Reads Annotation
actb1 ENSDARG00000037746, ENSDARG00000113649 273139 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]










Genes with expression patterns similar to actb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. actb1 ENSDARG00000037746, ENSDARG00000113649 273139 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actin, beta 1 [Source:ZFIN;Acc:ZDB-GENE-000329-1]
2. cfl1l ENSDARG00000012972 109130 3.184 0.904 - 0.747 - - 0.779 - 0.754 - cofilin 1 (non-muscle), like [Source:ZFIN;Acc:ZDB-GENE-040426-2770]
3. actb2 ENSDARG00000037870 441005 2.532 0.894 - - - - 0.763 0.875 - - actin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-000329-3]
4. pfn1 ENSDARG00000088091 71242 2.29 0.760 - - - 0.715 - - 0.815 - profilin 1 [Source:ZFIN;Acc:ZDB-GENE-031002-33]
5. tmsb4x ENSDARG00000077777 670040 1.775 0.903 - - - - 0.872 - - - thymosin beta 4 X-linked [Source:ZFIN;Acc:ZDB-GENE-030131-8304]
6. krt4 ENSDARG00000017624, ENSDARG00000115790 2008869 1.66 0.919 - - - - - - 0.741 - keratin 4 [Source:ZFIN;Acc:ZDB-GENE-000607-83]
7. cotl1 ENSDARG00000026829 23295 1.624 0.824 - - - - - - 0.800 - coactosin-like F-actin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8325]
8. apoc1l apoc1l 398664 1.608 0.892 - - - - 0.716 - - -
9. cldni ENSDARG00000054616, ENSDARG00000111133 16328 1.601 0.758 - - - - 0.843 - - - claudin i [Source:ZFIN;Acc:ZDB-GENE-010328-9]
10. zgc:136410 ENSDARG00000102241 8433 1.58 0.872 - - - - 0.708 - - - zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
11. mthfd1l ENSDARG00000042221, ENSDARG00000110473 19571 1.568 0.833 - - - - 0.735 - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
12. tfa ENSDARG00000016771 30517 1.542 0.840 - - - - 0.702 - - - transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
13. cst3 ENSDARG00000007795 13753 1.537 0.741 - - - - 0.796 - - - cystatin C (amyloid angiopathy and cerebral hemorrhage) [Source:ZFIN;Acc:ZDB-GENE-030131-373]
14. and2 ENSDARG00000079302 20939 1.527 - - - - - 0.734 - 0.793 - actinodin2 [Source:ZFIN;Acc:ZDB-GENE-041105-2]
15. ces2 ENSDARG00000041569, ENSDARG00000110630 5541 1.51 0.791 - - - - 0.719 - - - carboxylesterase 2 (intestine, liver) [Source:ZFIN;Acc:ZDB-GENE-061013-99]
16. atp1b1b ENSDARG00000076833 10324 1.509 0.763 - - - - 0.746 - - - ATPase Na+/K+ transporting subunit beta 1b [Source:ZFIN;Acc:ZDB-GENE-001127-4]
17. rbp4 ENSDARG00000101199 59390 1.484 0.707 - - - - 0.777 - - - retinol binding protein 4, plasma [Source:ZFIN;Acc:ZDB-GENE-000210-19]
18. apoea ENSDARG00000102004 13212 1.481 0.771 - - - - 0.710 - - - apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
19. zgc:92061 zgc:92061 21304 1.467 - - - - - 0.706 - 0.761 -
20. gart ENSDARG00000101089 6062 1.462 0.747 - - - - 0.715 - - - phosphoribosylglycinamide formyltransferase [Source:ZFIN;Acc:ZDB-GENE-000616-14]
21. and3 ENSDARG00000056873 22650 1.416 - - - - - - 0.701 0.715 - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
22. apobb apobb 258472 0.895 0.895 - - - - - - - -
23. nt5c3a ENSDARG00000058597 14299 0.879 0.879 - - - - - - - - 5'-nucleotidase, cytosolic IIIA [Source:ZFIN;Acc:ZDB-GENE-030131-439]
24. gatm ENSDARG00000036239 36141 0.874 0.874 - - - - - - - - glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:ZFIN;Acc:ZDB-GENE-021015-1]
25. CU914813.1 CU914813.1 29656 0.874 0.874 - - - - - - - -
26. apoa2 ENSDARG00000015866 297380 0.872 0.872 - - - - - - - - apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
27. fabp2 ENSDARG00000006427, ENSDARG00000110230 56349 0.869 0.869 - - - - - - - - fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
28. oclna ENSDARG00000005108 3280 0.868 - - - - - 0.868 - - - occludin a [Source:ZFIN;Acc:ZDB-GENE-040426-2685]
29. slc43a2b ENSDARG00000061120, ENSDARG00000117188 33657 0.86 0.860 - - - - - - - - solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
30. fermt1 ENSDARG00000052652 2394 0.859 - - - - - 0.859 - - - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
31. apoc2 ENSDARG00000092155 38149 0.858 0.858 - - - - - - - - apolipoprotein C-II [Source:ZFIN;Acc:ZDB-GENE-030131-2168]
32. ckmt1 ENSDARG00000016598, ENSDARG00000113143 15024 0.858 0.858 - - - - - - - - creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
33. si:ch211-233g6.8 si:ch211-233g6.8 1005 0.857 - - - - - 0.857 - - -
34. zgc:153867 35088 0.85 - - - - - 0.850 - - - zgc:153867, transcript variant X2
35. myh9a ENSDARG00000063295 27935 0.849 0.849 - - - - - - - - myosin, heavy chain 9a, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030131-5870]
36. atp1b3a ENSDARG00000015790 12310 0.846 - - - - - 0.846 - - - ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]
37. myl12.1 ENSDARG00000099766 50993 0.846 - - - - - 0.846 - - - myosin, light chain 12, genome duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4918]
38. apoeb ENSDARG00000040295 229165 0.845 0.845 - - - - - - - - apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
39. si:dkey-126g1.9 ENSDARG00000093702 7832 0.844 0.844 - - - - - - - - si:dkey-126g1.9 [Source:ZFIN;Acc:ZDB-GENE-030131-9862]
40. aldob ENSDARG00000053684 30498 0.844 0.844 - - - - - - - - aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
41. caspb ENSDARG00000052039 4329 0.843 - - - - - 0.843 - - - caspase b [Source:ZFIN;Acc:ZDB-GENE-020812-1]
42. gsnb ENSDARG00000045262 4382 0.842 - - - - - 0.842 - - - gelsolin b [Source:ZFIN;Acc:ZDB-GENE-030131-8567]
43. naga ENSDARG00000099313 2483 0.842 - - - - - 0.842 - - - N-acetylgalactosaminidase, alpha [Source:ZFIN;Acc:ZDB-GENE-051113-256]
44. a2ml ENSDARG00000056314 11788 0.839 0.839 - - - - - - - - alpha-2-macroglobulin-like [Source:ZFIN;Acc:ZDB-GENE-090212-1]
45. zgc:161979_1 zgc:161979_1 206500 0.836 0.836 - - - - - - - -
46. sult2st1_1 ENSDARG00000033170 3074 0.835 - - - - - 0.835 - - - sulfotransferase family 2, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030219-114]
47. efhd2 ENSDARG00000055759 7777 0.829 - - - - - 0.829 - - - EF-hand domain family, member D2 [Source:ZFIN;Acc:ZDB-GENE-060531-152]
48. itm2bb ENSDARG00000041505 2734 0.828 - - - - - 0.828 - - - integral membrane protein 2Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2139]
49. ctsla ENSDARG00000007836 67814 0.827 0.827 - - - - - - - - cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
50. sepp1a 41994 0.824 0.824 - - - - - - - - selenoprotein P, plasma, 1a
51. aldh9a1a.1 ENSDARG00000069100, ENSDARG00000114905 30071 0.82 - - - - - 0.820 - - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1257]
52. furina ENSDARG00000062909, ENSDARG00000117158 6313 0.816 - - - - - 0.816 - - - furin (paired basic amino acid cleaving enzyme) a [Source:ZFIN;Acc:ZDB-GENE-040901-1]
53. gnmt ENSDARG00000006840 2422 0.815 - - - - - 0.815 - - - glycine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040227-1]
54. lama5 ENSDARG00000058543 2782 0.814 - - - - - 0.814 - - - laminin, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9823]
55. apoa1b ENSDARG00000101324 336817 0.812 0.812 - - - - - - - - apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
56. si:dkey-193b15.6 si:dkey-193b15.6 1340 0.807 - - - - - 0.807 - - -
57. zgc:161979 zgc:161979 196746 0.805 0.805 - - - - - - - -
58. vasp vasp 3925 0.803 - - - - - 0.803 - - -
59. soul2 ENSDARG00000039499 1469 0.8 - - - - - 0.800 - - - heme-binding protein soul2 [Source:ZFIN;Acc:ZDB-GENE-030131-2524]
60. capg capg 2569 0.799 - - - - - 0.799 - - -
61. zgc:153129 zgc:153129 97132 0.797 0.797 - - - - - - - -
62. si:ch211-117m20.5 ENSDARG00000091996 7246 0.794 - - - - - 0.794 - - - si:ch211-117m20.5 [Source:ZFIN;Acc:ZDB-GENE-030131-12]
63. ftr83 ENSDARG00000025403, ENSDARG00000110533 1428 0.791 - - - - - 0.791 - - - finTRIM family, member 83 [Source:ZFIN;Acc:ZDB-GENE-031002-11]
64. tkt tkt 7203 0.791 0.791 - - - - - - - -
65. cyt1l ENSDARG00000036832 118292 0.789 0.789 - - - - - - - - type I cytokeratin, enveloping layer, like [Source:ZFIN;Acc:ZDB-GENE-061026-4]
66. col1a1a ENSDARG00000012405, ENSDARG00000116113 178153 0.786 - - - - - - - 0.786 - collagen, type I, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9102]
67. myl6 ENSDARG00000008494, ENSDARG00000115496 16296 0.784 0.784 - - - - - - - - myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
68. wu:fj05h12 wu:fj05h12 6166 0.783 - - - - - 0.783 - - -
69. sc:d173 sc:d173 1279 0.783 - - - - - 0.783 - - -
70. lamp2 ENSDARG00000014914 5035 0.781 - - - - - 0.781 - - - lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
71. FP067396.1 FP067396.1 32149 0.78 - - - - 0.780 - - - -
72. waslb ENSDARG00000006283 2160 0.779 - - - - - 0.779 - - - Wiskott-Aldrich syndrome-like b [Source:ZFIN;Acc:ZDB-GENE-040426-718]
73. fahd2a ENSDARG00000103759 9581 0.779 0.779 - - - - - - - - fumarylacetoacetate hydrolase domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-040426-2499]
74. prdx5 ENSDARG00000055064 27445 0.778 0.778 - - - - - - - - peroxiredoxin 5 [Source:ZFIN;Acc:ZDB-GENE-050522-159]
75. npc2 ENSDARG00000090912 21929 0.777 0.777 - - - - - - - - Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
76. f11r f11r 16668 0.777 - - - - - 0.777 - - -
77. CABZ01074130.1 ENSDARG00000105274 26501 0.776 - - - - - - - 0.776 -
78. h6pd ENSDARG00000060153, ENSDARG00000114064 1927 0.776 - - - - - 0.776 - - - hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-110408-60]
79. and1 ENSDARG00000088514 37603 0.775 - - - - - - - 0.775 - actinodin1 [Source:ZFIN;Acc:ZDB-GENE-030131-9105]
80. CU915738.1 CU915738.1 3723 0.775 - - - - - 0.775 - - -
81. sult1st4 ENSDARG00000003181 540 0.771 - - - - - 0.771 - - - sulfotransferase family 1, cytosolic sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2054]
82. mfsd8 ENSDARG00000103235, ENSDARG00000115968 2067 0.77 - - - - - 0.770 - - - major facilitator superfamily domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-060818-29]
83. tagln2 ENSDARG00000033466, ENSDARG00000110753 7636 0.769 - - - - - 0.769 - - - transgelin 2 [Source:ZFIN;Acc:ZDB-GENE-020802-2]
84. arf5 ENSDARG00000070472, ENSDARG00000115687 12490 0.768 - - - - - 0.768 - - - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
85. zgc:152830 ENSDARG00000079932 12194 0.767 0.767 - - - - - - - - zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
86. itgav ENSDARG00000006314 4277 0.767 - - - - - 0.767 - - - integrin, alpha V [Source:ZFIN;Acc:ZDB-GENE-060616-382]
87. s100u ENSDARG00000071014 4754 0.766 - - - - - 0.766 - - - S100 calcium binding protein U [Source:ZFIN;Acc:ZDB-GENE-030131-3121]
88. rpl5b ENSDARG00000015862, ENSDARG00000109661 79810 0.766 - - 0.766 - - - - - - ribosomal protein L5b [Source:ZFIN;Acc:ZDB-GENE-040625-93]
89. itgb1b.1 ENSDARG00000053232 4721 0.766 - - - - - 0.766 - - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
90. anxa1c ENSDARG00000104359 23181 0.765 0.765 - - - - - - - - annexin A1c [Source:ZFIN;Acc:ZDB-GENE-030131-5274]
91. serpina1l ENSDARG00000090850 10625 0.765 - - - - - 0.765 - - - serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
92. sid4 sid4 1358 0.765 - - - - - 0.765 - - -
93. mt2 ENSDARG00000041623, ENSDARG00000113583 15333 0.765 0.765 - - - - - - - - metallothionein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4174]
94. f10 ENSDARG00000088581 4968 0.765 - - - - - 0.765 - - - coagulation factor X [Source:ZFIN;Acc:ZDB-GENE-021206-9]
95. btbd10b ENSDARG00000020252 7251 0.765 - - - - - 0.765 - - - BTB (POZ) domain containing 10b [Source:ZFIN;Acc:ZDB-GENE-080104-5]
96. mthfd1a ENSDARG00000018266 286 0.765 - - - - - 0.765 - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1a, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase [Source:ZFIN;Acc:ZDB-GENE-041001-127]
97. si:ch1073-392o20.2 ENSDARG00000102599 4172 0.764 - - - - - 0.764 - - - si:ch1073-392o20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-431]
98. bri3 ENSDARG00000086332 8405 0.763 0.763 - - - - - - - - brain protein I3 [Source:ZFIN;Acc:ZDB-GENE-030131-3038]
99. fetub ENSDARG00000053973 43520 0.762 - - - - - 0.762 - - - fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
100. paics ENSDARG00000033539 30682 0.761 0.761 - - - - - - - - phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9762]

There are 143 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA