Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for acta2

Gene Name Gene ID Reads Annotation
acta2 ENSDARG00000045180 96 actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]










Genes with expression patterns similar to acta2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. acta2 ENSDARG00000045180 96 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
2. nxph2a ENSDARG00000063224 75 1.92 0.984 - - - - 0.936 - - - neurexophilin 2a [Source:ZFIN;Acc:ZDB-GENE-060503-124]
3. grin2da ENSDARG00000086207 28 1.761 1.000 - - - 0.761 - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a [Source:ZFIN;Acc:ZDB-GENE-041008-124]
4. tmem123 ENSDARG00000095674 66 1.732 0.920 - - - - 0.812 - - - transmembrane protein 123 [Source:ZFIN;Acc:ZDB-GENE-050419-69]
5. zgc:153952 739 1.662 0.881 - - - - 0.781 - - - zgc:153952, transcript variant X1
6. cyp2aa1 ENSDARG00000099003 297 1.645 0.849 - - - - 0.796 - - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
7. dbh ENSDARG00000069446, ENSDARG00000114942 60 1.644 - - - - 0.881 - - - 0.763 dopamine beta-hydroxylase (dopamine beta-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-990621-3]
8. tcf21 ENSDARG00000036869, ENSDARG00000111209 37 1.618 - - - - 0.863 - - 0.755 - transcription factor 21 [Source:ZFIN;Acc:ZDB-GENE-051113-88]
9. cryabb ENSDARG00000101380, ENSDARG00000109545 8 1.61 - - - 0.754 - - - 0.856 - crystallin, alpha B, b [Source:ZFIN;Acc:ZDB-GENE-040718-419]
10. nppa ENSDARG00000052960 295 1.608 - - - - 0.774 - - - 0.834 natriuretic peptide A [Source:ZFIN;Acc:ZDB-GENE-030131-95]
11. FOXL2 239 1.606 - - - - - - - 0.871 0.735 forkhead box L2, transcript variant X1
12. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 1.543 - - - - 0.758 - - 0.785 - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
13. tnni1b ENSDARG00000052708 478 1.539 - - - - 0.733 - - - 0.806 troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
14. egr2a ENSDARG00000044098 1101 1.537 0.821 - - - - 0.716 - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
15. vmhc 234 1.536 - - - - 0.725 - - - 0.811 ventricular myosin heavy chain
16. ANXA1 ANXA1 1103 1.531 0.823 - - - - 0.708 - - -
17. vmhcl 119 1.53 - - - - 0.740 - - - 0.790 ventricular myosin heavy chain-like
18. tbx1 ENSDARG00000031891 397 1.525 - - - 0.738 0.787 - - - - T-box 1 [Source:ZFIN;Acc:ZDB-GENE-030805-5]
19. tlx1 ENSDARG00000003965 67 1.513 - - - - 0.720 - - - 0.793 T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2]
20. dclre1b ENSDARG00000068833 359 1.506 0.753 - - - - 0.753 - - - DNA cross-link repair 1B [Source:ZFIN;Acc:ZDB-GENE-061013-328]
21. tnnc1a ENSDARG00000011400 165 1.503 - - - - - - - 0.711 0.792 troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
22. zgc:109868 zgc:109868 7474 1.493 - - - - - 0.716 - 0.777 -
23. hand2 ENSDARG00000008305 1214 1.476 - - - - - - - 0.729 0.747 heart and neural crest derivatives expressed 2 [Source:ZFIN;Acc:ZDB-GENE-000511-1]
24. alg11 ENSDARG00000031202, ENSDARG00000110001 308 1.467 0.729 - - - - 0.738 - - - asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-030131-7282]
25. COL9A1 COL9A1 264 1.434 - - - - - - - 0.723 0.711
26. aif1l ENSDARG00000009336 1340 1.413 0.709 - - - - 0.704 - - - allograft inflammatory factor 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9646]
27. DIP2B DIP2B 18 1 - - - - - - 1.000 - -
28. si:ch211-113a14.15_1 2 1 - - - - - - 1.000 - - si:ch211-113a14.15
29. lhx6 ENSDARG00000006896, ENSDARG00000112520 98 1 - - - - - - 1.000 - - LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]
30. camk1ga ENSDARG00000044526 5 1 - - - - - - 1.000 - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
31. fut9d ENSDARG00000028098 427 1 1.000 - - - - - - - - fucosyltransferase 9d [Source:ZFIN;Acc:ZDB-GENE-050309-15]
32. SNORA81_1 SNORA81_1 8 1 - - - - - - 1.000 - -
33. HTRA2_6 HTRA2_6 0 1 - - - - - - 1.000 - -
34. RAB3IL1 ENSDARG00000007711 11 1 - - - - - - 1.000 - - RAB3A interacting protein (rabin3)-like 1 [Source:ZFIN;Acc:ZDB-GENE-110921-5]
35. purg ENSDARG00000099187, ENSDARG00000114450 33 1 - - - - - - 1.000 - - purine-rich element binding protein G [Source:ZFIN;Acc:ZDB-GENE-070702-3]
36. fmn1 ENSDARG00000011975 5 1 - - - - - - 1.000 - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
37. hbaa2 ENSDARG00000069735 10 1 - - - - - - 1.000 - - hemoglobin, alpha adult 2 [Source:ZFIN;Acc:ZDB-GENE-081104-38]
38. TRIM35_3 TRIM35_3 172 1 - - - - - - 1.000 - -
39. si:dkeyp-4f2.3 ENSDARG00000096011, ENSDARG00000104584 5 1 - - - - - - 1.000 - - si:dkeyp-4f2.3 [Source:ZFIN;Acc:ZDB-GENE-110914-117]
40. slc18b1 ENSDARG00000044047 7 1 - - - - - - 1.000 - - solute carrier family 18, subfamily B, member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-386]
41. rhcgl1 ENSDARG00000007080, ENSDARG00000111618 28 1 - - - - - - 1.000 - - Rh family, C glycoprotein, like 1 [Source:ZFIN;Acc:ZDB-GENE-060209-2]
42. crfb12 ENSDARG00000052413 47 1 1.000 - - - - - - - - cytokine receptor family member B12 [Source:ZFIN;Acc:ZDB-GENE-060421-4184]
43. THBS1_1 THBS1_1 6 1 1.000 - - - - - - - -
44. cacnb4a ENSDARG00000009738 28 1 - - - - - 1.000 - - - calcium channel, voltage-dependent, beta 4a subunit [Source:ZFIN;Acc:ZDB-GENE-080320-2]
45. il1b ENSDARG00000098700 27 1 - - - - - - 1.000 - - interleukin 1, beta [Source:ZFIN;Acc:ZDB-GENE-040702-2]
46. si:dkey-94f20.4 ENSDARG00000016923 2 1 - - - - - - 1.000 - - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
47. fam219b ENSDARG00000104637 3 1 - - - - - - 1.000 - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
48. si:ch73-289h5.3 si:ch73-289h5.3 9 1 1.000 - - - - - - - -
49. ftr56 ENSDARG00000030954 23 1 1.000 - - - - - - - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
50. FAM177B 9 1 - - - - - 1.000 - - - family with sequence similarity 177 member B
51. BX000442.2 BX000442.2 8 1 1.000 - - - - - - - -
52. hyal3 ENSDARG00000036818 23 1 - - - - - - 1.000 - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
53. CU861664.1 CU861664.1 53 1 - - - - - - 1.000 - -
54. spo11 ENSDARG00000013837 7 1 - - - - - - 1.000 - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
55. si:dkey-148b12.4 si:dkey-148b12.4 2 1 - - - - - - 1.000 - -
56. GALNT8_1 GALNT8_1 10 1 - - - - - - 1.000 - -
57. ENSDARG00000091099 ENSDARG00000091099 5 1 - - - - - - 1.000 - -
58. GPR78 GPR78 17 1 - - - - - - 1.000 - -
59. b3galtlb b3galtlb 27 1 - - - - - - 1.000 - -
60. mir10b-2 116 1 - - - - - - 1.000 - - microRNA 10b-2
61. CR942805.1 CR942805.1 94 1 - - - - - - 1.000 - -
62. map2k4a ENSDARG00000063583 38 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060512-98]
63. NPFFR1 ENSDARG00000111997 29 1 - - - - - - 1.000 - - neuropeptide FF receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8106]
64. psmd2 ENSDARG00000103190 141 1 - - - - - - 1.000 - - proteasome 26S subunit, non-ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1480]
65. crygm3 ENSDARG00000078189, ENSDARG00000112851 6 1 1.000 - - - - - - - - crystallin, gamma M3 [Source:ZFIN;Acc:ZDB-GENE-050516-6]
66. TRHDE TRHDE 1 1 - - - - - - 1.000 - -
67. CABZ01012857.1 CABZ01012857.1 78 1 1.000 - - - - - - - -
68. wdr4 ENSDARG00000090581 42 1 - - - - - - 1.000 - - WD repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-060810-10]
69. BX682234.3 BX682234.3 7 1 - - - - - - 1.000 - -
70. ENSDARG00000074422 ENSDARG00000074422 61 1 - - - - - - 1.000 - -
71. SLC25A22_1 SLC25A22_1 3 1 - - - - - - 1.000 - -
72. si:dkey-28d5.13 ENSDARG00000077260 3 1 - - - - - - 1.000 - - si:dkey-28d5.13 [Source:ZFIN;Acc:ZDB-GENE-060503-636]
73. CABZ01066695.1 CABZ01066695.1 12 1 - - - - - - 1.000 - -
74. SNORA81 SNORA81 47 1 - - - - - - 1.000 - -
75. btd ENSDARG00000099596 88 1 1.000 - - - - - - - - biotinidase [Source:ZFIN;Acc:ZDB-GENE-060825-186]
76. sim1b ENSDARG00000013789 47 1 - - - - - - 1.000 - - SIM bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041210-5]
77. si:ch211-140o17.1 si:ch211-140o17.1 0 1 - - - - - - 1.000 - -
78. ncf2 ENSDARG00000005821 28 1 - - - - - - 1.000 - - neutrophil cytosolic factor 2 [Source:ZFIN;Acc:ZDB-GENE-070209-29]
79. tbxas1 ENSDARG00000002249 55 1 1.000 - - - - - - - - thromboxane A synthase 1 (platelet) [Source:ZFIN;Acc:ZDB-GENE-030131-8805]
80. serpinb1l1 ENSDARG00000095830 14 1 1.000 - - - - - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 1 [Source:ZFIN;Acc:ZDB-GENE-040715-5]
81. BX682234.1 ENSDARG00000074732 5 1 - - - - - - 1.000 - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
82. VWDE_1 VWDE_1 2 1 - - - - - - 1.000 - -
83. CU469532.1 CU469532.1 31 1 - - - - - - 1.000 - -
84. CABZ01048549.1 CABZ01048549.1 1 1 - - - - - - 1.000 - -
85. CR457462.1 CR457462.1 11 1 - - - - - - 1.000 - -
86. zgc:66455 ENSDARG00000052375 3 1 - - - - - - 1.000 - - zgc:66455 [Source:ZFIN;Acc:ZDB-GENE-040426-1642]
87. rrad ENSDARG00000052011, ENSDARG00000112434 70 1 - - - - - - 1.000 - - Ras-related associated with diabetes [Source:ZFIN;Acc:ZDB-GENE-030131-5607]
88. si:dkey-102f14.7 ENSDARG00000092255 1 1 - - - - - - 1.000 - - si:dkey-102f14.7 [Source:ZFIN;Acc:ZDB-GENE-060503-895]
89. si:ch211-238g23.1 ENSDARG00000055746 23 1 - - - - - - 1.000 - - si:ch211-238g23.1 [Source:ZFIN;Acc:ZDB-GENE-050420-173]
90. wu:fi26e04 wu:fi26e04 15 1 - - - - - - 1.000 - -
91. zgc:172053 ENSDARG00000038321 9 1 - - - - - - 1.000 - - zgc:172053 [Source:ZFIN;Acc:ZDB-GENE-080219-25]
92. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 1 - - - - - - 1.000 - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
93. si:ch211-163f10.4 si:ch211-163f10.4 1 1 - - - - - - 1.000 - -
94. ENSDARG00000077328 ENSDARG00000077328 1 1 - - - - - - 1.000 - -
95. C24H8orf34 C24H8orf34 1 1 - - - - - - 1.000 - -
96. CABZ01113374.2 CABZ01113374.2 27 1 1.000 - - - - - - - -
97. zgc:153846 ENSDARG00000040738 1 1 - - - - - - 1.000 - - zgc:153846 [Source:ZFIN;Acc:ZDB-GENE-060929-898]
98. lipt2 ENSDARG00000069852 14 1 - - - - - - 1.000 - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
99. CR376723.1 CR376723.1 8 1 1.000 - - - - - - - -
100. U4atac U4atac 47 1 - - - - - - 1.000 - -

There are 717 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA