Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for acta1b

Gene Name Gene ID Reads Annotation
acta1b ENSDARG00000055618 195597 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]










Genes with expression patterns similar to acta1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. acta1b ENSDARG00000055618 195597 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
2. atp2a1 ENSDARG00000020574 291561 6.725 0.961 - 0.945 0.704 0.820 0.810 0.816 0.940 0.729 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
3. mylz3 ENSDARG00000017441 303597 6.629 0.951 - 0.938 0.717 0.820 0.816 0.823 0.822 0.742 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
4. tnnt3a ENSDARG00000030270 112506 6.622 0.911 - 0.944 0.740 0.826 0.842 0.839 0.811 0.709 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
5. tpma ENSDARG00000033683 752432 6.154 0.938 - 0.941 0.742 0.801 0.878 0.911 0.943 - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
6. ckma ENSDARG00000035327, ENSDARG00000114671 418792 6.001 0.914 - 0.928 0.886 0.770 0.870 - 0.856 0.777 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
7. ckmb ENSDARG00000040565 505935 5.865 0.910 - 0.946 0.789 0.838 0.739 0.791 0.852 - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
8. si:ch211-226o13.2 84923 5.635 0.753 - 0.954 0.709 0.702 0.931 - 0.858 0.728 si:ch211-226o13.2
9. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 5.219 0.955 - 0.935 - 0.805 0.863 - 0.850 0.811 myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
10. myl1 ENSDARG00000014196 98943 5.199 0.903 - 0.954 0.828 0.842 0.864 - 0.808 - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
11. myhz1.3 ENSDARG00000067997 155509 5.101 0.950 - 0.912 0.751 0.858 0.848 - 0.782 - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
12. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 4.879 0.929 - 0.804 0.730 - 0.814 - 0.871 0.731 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
13. pkmb ENSDARG00000099860 25094 4.874 0.854 - 0.720 - - 0.810 0.857 0.919 0.714 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
14. tnnc2 ENSDARG00000070835, ENSDARG00000111155 259313 4.429 0.872 - - 0.934 - 0.881 - 0.928 0.814 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
15. tmem38a ENSDARG00000024047 41883 4.264 0.965 - 0.912 - 0.775 0.732 - 0.880 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
16. aldoab ENSDARG00000034470 88942 4.249 0.968 - - - 0.825 0.768 0.871 0.817 - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
17. pvalb2 ENSDARG00000002768, ENSDARG00000114085 333278 4.24 0.931 - 0.799 - - 0.833 - 0.933 0.744 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
18. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 4.219 0.800 - 0.929 - 0.800 - 0.784 0.906 - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
19. casq2 ENSDARG00000008982 21802 4.159 0.933 - 0.879 0.711 0.796 - - 0.840 - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
20. ttnb ttnb 73721 4.147 0.803 - 0.905 - 0.800 0.846 - 0.793 -
21. myoz1b ENSDARG00000071445 13381 4.142 0.925 - 0.890 0.719 - - - 0.878 0.730 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
22. mylpfb ENSDARG00000002589 70167 4.135 - - 0.916 0.726 0.755 0.833 - 0.905 - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
23. SYNPO2L SYNPO2L 6697 4.117 0.876 - 0.857 0.717 - 0.800 - 0.867 -
24. rtn2a ENSDARG00000016088 12184 4.075 0.896 - 0.845 - 0.716 - 0.789 0.829 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
25. srl ENSDARG00000104587 11126 4.07 0.860 - 0.851 - 0.761 - 0.773 0.825 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
26. pgam2 ENSDARG00000057571 23387 4.054 0.913 - 0.775 0.717 0.792 - - 0.857 - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
27. acta1a ENSDARG00000036371 137508 4.035 0.810 - - 0.707 - 0.866 - 0.851 0.801 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
28. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 4.016 0.863 - 0.765 - - 0.787 0.756 0.845 - LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
29. PTPLA PTPLA 4044 4.002 0.870 - 0.763 - - 0.779 0.769 0.821 -
30. zgc:92518 ENSDARG00000016343 3837 3.997 0.905 - 0.787 - 0.734 0.802 0.769 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
31. hhatla ENSDARG00000039051 6598 3.989 0.898 - 0.898 0.723 - - 0.763 - 0.707 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
32. neb ENSDARG00000032630, ENSDARG00000109273 19493 3.944 0.852 - 0.887 0.714 0.750 0.741 - - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
33. CR847973.1 ENSDARG00000115516 8754 3.936 0.826 - 0.816 - - 0.743 0.725 0.826 -
34. murcb murcb 13655 3.935 0.925 - 0.757 0.728 - - 0.759 0.766 -
35. CR354540.2 ENSDARG00000117517 18452 3.93 0.841 - 0.844 - 0.756 - 0.753 0.736 -
36. klhl41b ENSDARG00000006757 10762 3.914 0.914 - 0.754 - - 0.759 0.782 0.705 - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
37. pvalb4 ENSDARG00000024433 35736 3.912 0.885 - 0.820 - 0.764 - 0.732 0.711 - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
38. sar1ab ENSDARG00000033320 3984 3.903 0.840 - 0.799 - 0.733 - 0.746 0.785 - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
39. txlnbb ENSDARG00000076241 6396 3.871 0.919 - 0.711 - 0.753 0.739 0.749 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
40. tnni2a.4 ENSDARG00000029069 122344 3.548 0.946 - 0.873 - 0.811 - - 0.918 - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
41. tnnt3b ENSDARG00000068457 101827 3.488 0.774 - 0.856 - - 0.923 - 0.935 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
42. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 3.44 0.878 - 0.872 - - - 0.764 0.926 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
43. actc1b ENSDARG00000099197 324665 3.426 0.859 - 0.891 - 0.850 - - 0.826 - actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
44. myom1a ENSDARG00000061249 10230 3.379 - - 0.892 - - 0.820 0.771 0.896 - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
45. mybpc2b ENSDARG00000021265 9618 3.372 0.890 - 0.857 - - - 0.729 0.896 - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
46. ttna ttna 101197 3.371 0.830 - 0.930 - 0.791 - - 0.820 -
47. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 3.319 0.897 - 0.920 0.726 0.776 - - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
48. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 3.319 0.892 - 0.824 - - - 0.749 0.854 - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
49. tgm2a ENSDARG00000070157 4516 3.317 0.918 - 0.870 - - 0.775 0.754 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
50. BX294434.1 ENSDARG00000061272 6493 3.3 0.918 - 0.795 - - - 0.767 0.820 - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
51. pygma ENSDARG00000055518 15972 3.288 0.928 - - - 0.739 - 0.731 0.890 - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
52. nexn ENSDARG00000057317 10972 3.279 0.915 - 0.793 - - 0.812 0.759 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
53. ldb3b ENSDARG00000099974 33615 3.263 0.836 - 0.927 - 0.702 - - 0.798 - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
54. tnni2b.1 ENSDARG00000035958 51597 3.249 0.845 - 0.896 - 0.720 - - 0.788 - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
55. gapdh ENSDARG00000043457 68684 3.235 0.716 - 0.854 - 0.755 - - 0.910 - glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
56. trdn ENSDARG00000041779 4283 3.225 0.875 - 0.877 - 0.734 - 0.739 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
57. BX324201.1 BX324201.1 3302 3.215 0.914 - 0.817 - - - 0.772 0.712 -
58. NRAP ENSDARG00000009341 3565 3.207 0.858 - 0.808 - - 0.787 0.754 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
59. pfkmb ENSDARG00000060797, ENSDARG00000109412, ENSDARG00000109653, ENSDARG00000115422 3323 3.202 0.730 - - - - 0.812 0.781 0.879 - phosphofructokinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-081114-1]
60. tmem182 tmem182 12589 3.201 - - 0.781 - - 0.810 0.780 0.830 -
61. stac3 ENSDARG00000098883 1765 3.194 0.907 - 0.773 - - 0.804 0.710 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
62. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 3.177 0.853 - 0.710 - - - 0.745 0.869 - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
63. ak1 ENSDARG00000001950 26964 3.174 0.785 - - - 0.815 - 0.800 0.774 - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
64. klhl31 ENSDARG00000039066 13656 3.171 0.722 - 0.886 - 0.733 - - 0.830 - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
65. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 3.159 0.891 - 0.805 - - 0.748 0.715 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
66. ryr3 ENSDARG00000071331 6795 3.128 0.827 - 0.792 - - 0.766 0.743 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
67. ryr1b ENSDARG00000023797 5693 3.122 - - 0.836 - 0.702 - 0.771 0.813 - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
68. adss ENSDARG00000002071 5497 3.115 0.806 - 0.831 - 0.727 - 0.751 - - adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
69. MYOM1 MYOM1 3870 3.1 0.827 - 0.794 - - - 0.740 0.739 -
70. chrna1 ENSDARG00000009021 2931 3.095 0.859 - 0.734 - - 0.777 0.725 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
71. fitm1 ENSDARG00000056464 1759 3.081 0.860 - 0.741 - - - 0.707 0.773 - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
72. tnnt2d ENSDARG00000002988 7590 3.08 0.778 - 0.766 - - - 0.715 0.821 - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
73. klhl40a ENSDARG00000039052 2537 3.075 0.857 - - - - 0.738 0.762 0.718 - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
74. MYOT ENSDARG00000076312 1791 3.025 0.789 - 0.806 - - 0.713 0.717 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
75. nmrk2 ENSDARG00000067848 10293 3.024 - - 0.738 - 0.713 - 0.763 0.810 - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
76. si:ch211-255p10.3 ENSDARG00000096616 8336 2.995 - - 0.711 - - 0.784 - 0.786 0.714 si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
77. znf648 ENSDARG00000104823 1918 2.988 0.750 - 0.778 - - 0.727 - 0.733 - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
78. jph1a ENSDARG00000058603 2852 2.928 - - 0.736 - - 0.711 0.734 0.747 - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
79. nid1a ENSDARG00000068710 3948 2.836 0.706 - 0.709 - - 0.706 0.715 - - nidogen 1a [Source:ZFIN;Acc:ZDB-GENE-050302-58]
80. ank1 ank1 5209 2.622 0.875 - 0.841 - - - - 0.906 -
81. desma ENSDARG00000058656 30292 2.61 0.939 - 0.898 - 0.773 - - - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
82. murca murca 6614 2.551 0.913 - 0.858 - - 0.780 - - -
83. pvalb1 ENSDARG00000037789 121195 2.547 - - - - - 0.923 - 0.849 0.775 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
84. calm1b ENSDARG00000034187 13158 2.542 0.890 - 0.902 - - 0.750 - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
85. cap2 ENSDARG00000104478 3266 2.492 0.917 - - - - - 0.769 0.806 - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
86. si:ch211-156j16.1 ENSDARG00000092035 7441 2.477 0.930 - 0.783 - - - 0.764 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
87. SYNPO2 SYNPO2 7382 2.471 - - 0.922 - - 0.774 - 0.775 -
88. EHBP1L1 EHBP1L1 2500 2.47 0.866 - 0.832 - - - 0.772 - -
89. jph2 ENSDARG00000028625 6706 2.463 0.826 - - - - - 0.771 0.866 - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
90. prx ENSDARG00000017246 6183 2.461 0.861 - 0.835 - - - 0.765 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
91. eef2l2 ENSDARG00000035256 6815 2.458 0.917 - 0.835 - - - - 0.706 - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
92. smyd2b ENSDARG00000005629 8181 2.455 0.893 - - - 0.760 0.802 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
93. mdh1b ENSDARG00000018008 3196 2.448 0.836 - 0.841 - - - 0.771 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
94. si:ch211-114n24.7 si:ch211-114n24.7 2544 2.447 0.847 - 0.868 - - - 0.732 - -
95. TMPO TMPO 3264 2.445 0.891 - 0.817 - - - 0.737 - -
96. actn3b ENSDARG00000001431 15747 2.444 0.901 - 0.837 - 0.706 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
97. lama2 ENSDARG00000099390 24734 2.444 0.887 0.835 0.722 - - - - - - laminin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-060119-1]
98. COL22A1 COL22A1 4473 2.442 0.795 - 0.866 - - - 0.781 - -
99. tnni1al 8272 2.423 0.809 - 0.841 - - - - 0.773 - troponin I, skeletal, slow like, transcript variant X1
100. apobec2a ENSDARG00000018881 4790 2.41 0.895 - 0.717 - - - - 0.798 - apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]

There are 498 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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