Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for acta1a

Gene Name Gene ID Reads Annotation
acta1a ENSDARG00000036371 137508 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]










Genes with expression patterns similar to acta1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. acta1a ENSDARG00000036371 137508 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
2. myl10 ENSDARG00000062592 101207 4.927 0.882 - - 0.730 0.953 0.758 0.826 0.778 - myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
3. tnnc2 ENSDARG00000070835, ENSDARG00000111155 259313 4.235 0.965 - - 0.752 - 0.869 - 0.934 0.715 troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
4. acta1b ENSDARG00000055618 195597 4.035 0.810 - - 0.707 - 0.866 - 0.851 0.801 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
5. tnnt3a ENSDARG00000030270 112506 3.515 0.830 - - - - 0.946 0.858 0.881 - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
6. hsp90aa1.1 ENSDARG00000010478 47784 3.365 0.876 0.812 - 0.743 0.934 - - - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
7. ckmb ENSDARG00000040565 505935 3.354 0.910 - - - - 0.768 0.794 0.882 - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
8. myhz1.3 ENSDARG00000067997 155509 3.28 0.880 - - - - 0.850 0.751 0.799 - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
9. myl1 ENSDARG00000014196 98943 3.245 0.850 - - 0.773 - 0.765 - 0.857 - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
10. tpm2 ENSDARG00000104682 36853 3.235 0.831 - - 0.704 0.925 - - 0.775 - tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
11. klhl31 ENSDARG00000039066 13656 3.216 0.853 - - 0.750 0.793 - - 0.820 - kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
12. atp2a1 ENSDARG00000020574 291561 3.177 0.808 - - - - 0.754 0.807 0.808 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
13. myhz2 ENSDARG00000012944 69921 3.138 0.821 - - - 0.770 0.844 0.703 - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
14. ttnb ttnb 73721 3.083 0.851 - - - 0.728 0.739 - 0.765 -
15. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 3.072 - - - - 0.704 0.707 - 0.864 0.797 zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
16. pvalb1 ENSDARG00000037789 121195 3.07 0.775 - - - - 0.760 - 0.788 0.747 parvalbumin 1 [Source:ZFIN;Acc:ZDB-GENE-040625-57]
17. cav3 ENSDARG00000024141 14906 2.852 - - - 0.719 0.710 0.717 0.706 - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
18. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 2.672 0.906 - - - - 0.876 - 0.890 - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
19. si:ch211-226o13.2 84923 2.646 0.934 - - - - 0.859 - 0.853 - si:ch211-226o13.2
20. ckma ENSDARG00000035327, ENSDARG00000114671 418792 2.615 0.931 - - - - 0.835 - 0.849 - creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
21. tnni2b.1 ENSDARG00000035958 51597 2.612 0.842 - - - 0.893 - - 0.877 - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
22. mylz3 ENSDARG00000017441 303597 2.596 0.885 - - - - 0.889 - 0.822 - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
23. tnnt3b ENSDARG00000068457 101827 2.551 0.929 - - - - 0.784 - 0.838 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
24. zgc:66286 zgc:66286 118947 2.486 0.720 - - - 0.957 - - 0.809 -
25. ttna ttna 101197 2.484 0.895 - - - 0.783 - - 0.806 -
26. tpma ENSDARG00000033683 752432 2.473 0.895 - - - - 0.732 - 0.846 - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
27. tmem38a ENSDARG00000024047 41883 2.448 0.755 - - - 0.810 - - 0.883 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
28. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 2.448 0.789 - - - 0.940 - - 0.719 - slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
29. mylpfb ENSDARG00000002589 70167 2.441 0.801 - - - - - 0.823 0.817 - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
30. ak1 ENSDARG00000001950 26964 2.413 0.870 - - 0.738 - - - 0.805 - adenylate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040822-37]
31. tnni2a.4 ENSDARG00000029069 122344 2.371 0.746 - - - - 0.753 - 0.872 - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
32. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.358 0.785 - - - 0.735 - - 0.838 - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
33. desma ENSDARG00000058656 30292 2.345 0.756 - - 0.712 - - - 0.877 - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
34. mt-cyb ENSDARG00000063924 233778 2.321 - - - - - 0.783 0.770 0.768 - cytochrome b, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-17]
35. pmp22b ENSDARG00000060457 20406 2.308 0.775 0.734 - - - - - 0.799 - peripheral myelin protein 22b [Source:ZFIN;Acc:ZDB-GENE-060421-4337]
36. klhl41b ENSDARG00000006757 10762 2.307 0.711 - - - 0.895 - 0.701 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
37. tpm3 ENSDARG00000005162 86049 2.305 0.779 - - - 0.790 - - 0.736 - tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]
38. pvalb2 ENSDARG00000002768, ENSDARG00000114085 333278 2.286 0.775 - - - - 0.754 - 0.757 - parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
39. tmem182 tmem182 12589 2.279 0.800 - - - - - 0.705 0.774 -
40. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 2.278 0.704 - - - 0.841 0.733 - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
41. unc45b ENSDARG00000008433 8298 2.263 - - 0.732 - 0.831 - 0.700 - - unc-45 myosin chaperone B [Source:ZFIN;Acc:ZDB-GENE-020919-3]
42. SYNPO2 SYNPO2 7382 2.244 0.781 - - 0.710 - 0.753 - - -
43. neb ENSDARG00000032630, ENSDARG00000109273 19493 2.234 0.706 - - - - 0.796 - 0.732 - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
44. srl ENSDARG00000104587 11126 2.232 - - - - 0.701 - 0.703 0.828 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
45. CR354540.2 ENSDARG00000117517 18452 2.214 0.709 - - - - 0.712 - 0.793 -
46. txlnbb ENSDARG00000076241 6396 2.21 0.708 - - - - 0.744 - 0.758 - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
47. rtn2a ENSDARG00000016088 12184 2.189 0.730 - - - - - 0.713 0.746 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
48. SYNPO2L SYNPO2L 6697 2.176 0.728 - - - - 0.704 - 0.744 -
49. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.172 0.717 - - - 0.721 0.734 - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
50. smyd2b ENSDARG00000005629 8181 2.17 0.720 - - - 0.738 0.712 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
51. smtnl1 ENSDARG00000041257 7410 2.142 0.728 - - - - 0.709 0.705 - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
52. actc1b ENSDARG00000099197 324665 1.663 0.889 - - - - - - 0.774 - actin, alpha, cardiac muscle 1b [Source:ZFIN;Acc:ZDB-GENE-000322-1]
53. pgam2 ENSDARG00000057571 23387 1.636 0.731 - - - - - - 0.905 - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
54. tnnt2c ENSDARG00000032242 28801 1.629 0.723 - - - 0.906 - - - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
55. ldb3b ENSDARG00000099974 33615 1.622 0.879 - - - - - - 0.743 - LIM domain binding 3b [Source:ZFIN;Acc:ZDB-GENE-030131-6032]
56. nexn ENSDARG00000057317 10972 1.6 0.748 - - - 0.852 - - - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
57. PTGES3L PTGES3L 4801 1.581 - - - - 0.846 0.735 - - -
58. txlnba ENSDARG00000020594 9385 1.579 0.710 - - - 0.869 - - - - taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
59. nmrk2 ENSDARG00000067848 10293 1.577 0.794 - - - - - - 0.783 - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
60. myoz1b ENSDARG00000071445 13381 1.576 0.719 - - - - - - 0.857 - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
61. tnnc1b ENSDARG00000037539 13945 1.57 0.723 - - - 0.847 - - - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
62. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 1.562 0.700 - - - - - - 0.862 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
63. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 1.561 - - - - - 0.763 - 0.798 - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
64. pygma ENSDARG00000055518 15972 1.545 0.748 - - - - - - 0.797 - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
65. aldoab ENSDARG00000034470 88942 1.544 0.817 - - - - - - 0.727 - aldolase a, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-040426-2299]
66. AIMP1 ENSDARG00000060036 4136 1.532 - - - - 0.769 - - 0.763 - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
67. ank1 ank1 5209 1.522 0.714 - - - - - - 0.808 -
68. tmem161a ENSDARG00000012790 16094 1.519 0.714 - - - 0.805 - - - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
69. sncga ENSDARG00000034423, ENSDARG00000112260 5469 1.519 - - - 0.728 - - - 0.791 - synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
70. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 1.515 0.729 - - - - - - 0.786 - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
71. synpo2lb ENSDARG00000078696 2361 1.507 0.705 - - - 0.802 - - - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
72. casq2 ENSDARG00000008982 21802 1.505 0.749 - - - - - - 0.756 - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
73. cd81 cd81 44833 1.505 0.782 0.723 - - - - - - -
74. chchd10 ENSDARG00000010717, ENSDARG00000111874 4782 1.495 - - - - 0.727 - - 0.768 - coiled-coil-helix-coiled-coil-helix domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1753]
75. rtn2b ENSDARG00000057027 1391 1.495 - - - - - - 0.702 0.793 - reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
76. mt-co3 ENSDARG00000063912 398919 1.493 0.782 - - - - 0.711 - - - cytochrome c oxidase III, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-16]
77. mybpc2b ENSDARG00000021265 9618 1.489 0.730 - - - - - - 0.759 - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
78. cacng1 cacng1 3118 1.48 0.711 - - - 0.769 - - - -
79. cap2 ENSDARG00000104478 3266 1.479 0.721 - - - - - - 0.758 - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
80. nme2b.2 ENSDARG00000099420 70588 1.478 0.760 - - - - - - 0.718 - NME/NM23 nucleoside diphosphate kinase 2b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-000210-33]
81. myod1 ENSDARG00000030110 6019 1.475 0.704 - - - 0.771 - - - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
82. mt-atp6 ENSDARG00000063911 461280 1.474 - - - - - 0.721 - 0.753 - ATP synthase 6, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-18]
83. zgc:92518 ENSDARG00000016343 3837 1.472 0.718 - - - 0.754 - - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
84. EHBP1L1 EHBP1L1 2500 1.471 0.707 - - - - - - 0.764 -
85. si:ch211-156j16.1 ENSDARG00000092035 7441 1.463 0.737 - - - - - - 0.726 - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
86. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 1.463 - - - - - 0.757 - 0.706 - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
87. actn3b ENSDARG00000001431 15747 1.451 0.732 - - - 0.719 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
88. tgm2a ENSDARG00000070157 4516 1.451 0.746 - - - - - 0.705 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
89. BX324201.1 BX324201.1 3302 1.447 0.740 - - - - - - 0.707 -
90. hfe2 4113 1.447 0.704 - - - 0.743 - - - - hemochromatosis type 2
91. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 1.437 - - - - 0.734 - 0.703 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
92. sptb ENSDARG00000030490 7128 1.436 - - - - - 0.719 0.717 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
93. fitm1 ENSDARG00000056464 1759 1.423 - - - - - 0.707 - 0.716 - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
94. BX294434.1 ENSDARG00000061272 6493 1.419 0.701 - - - - - - 0.718 - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
95. ptrfa ptrfa 4363 1.418 0.703 - - - - 0.715 - - -
96. DNAJA4 ENSDARG00000051762 5657 1.407 - - - - - - 0.704 0.703 - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
97. sh3bgr ENSDARG00000021633 3498 1.407 0.702 - - - - - 0.705 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
98. stac3 ENSDARG00000098883 1765 1.403 0.702 - - - - 0.701 - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
99. mef2ca ENSDARG00000029764 18547 0.925 - - - - 0.925 - - - - myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
100. mt-nd1 ENSDARG00000063895 272230 0.901 0.901 - - - - - - - - NADH dehydrogenase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-7]

There are 172 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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