Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for acss3

Gene Name Gene ID Reads Annotation
acss3 ENSDARG00000032218 226 acyl-CoA synthetase short chain family member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-816]










Genes with expression patterns similar to acss3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. acss3 ENSDARG00000032218 226 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 acyl-CoA synthetase short chain family member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-816]
2. TMEM200B TMEM200B 554 1.629 - - 0.790 - - 0.839 - - -
3. CMA1_8 CMA1_8 10 1.585 - 0.822 - - - 0.763 - - -
4. si:ch211-207c6.6 si:ch211-207c6.6 32 1.581 - 0.831 - - - 0.750 - - -
5. C9H3orf38 C9H3orf38 83 1.579 - 0.780 - - - 0.799 - - -
6. EPS8 78 1.559 - 0.745 - - - 0.814 - - - epidermal growth factor receptor pathway substrate 8, transcript variant X14
7. atp1a1a.2 ENSDARG00000007739 121 1.554 - 0.820 - - - 0.734 - - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-001212-2]
8. si:dkeyp-4f2.5 si:dkeyp-4f2.5 232 1.545 - 0.837 0.708 - - - - - -
9. BX908793.1 BX908793.1 573 1.54 0.803 0.737 - - - - - - -
10. eps8l3 eps8l3 144 1.535 - 0.709 - - - - 0.826 - -
11. PLEKHA2 PLEKHA2 43 1.535 - 0.817 - - - 0.718 - - -
12. sh2d5 ENSDARG00000014324 228 1.524 0.744 0.780 - - - - - - - SH2 domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050327-67]
13. si:dkey-233e3.1 si:dkey-233e3.1 7 1.523 - 0.822 - - - 0.701 - - -
14. si:dkey-182g1.2 ENSDARG00000052680, ENSDARG00000109368 147 1.507 - 0.774 - - - 0.733 - - - si:dkey-182g1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-619]
15. ZDHHC21 ENSDARG00000110709 295 1.474 - 0.755 - - - 0.719 - - - zinc finger, DHHC-type containing 21 [Source:ZFIN;Acc:ZDB-GENE-080401-2]
16. wrnip1 ENSDARG00000005218 695 1.471 - - 0.771 - - - 0.700 - - Werner helicase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2415]
17. ATAD2 ENSDARG00000076590 411 1.45 - - - - - 0.707 0.743 - - ATPase family, AAA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7003]
18. hhipl1 ENSDARG00000062501 210 1.422 - 0.701 - - - - 0.721 - - HHIP-like 1 [Source:ZFIN;Acc:ZDB-GENE-090306-3]
19. CUZD1_3 CUZD1_3 9 0.989 - - - - - 0.989 - - -
20. RDM1 RDM1 28 0.989 - - - - - 0.989 - - -
21. TRPM4 TRPM4 60 0.946 - - - - - 0.946 - - -
22. tha1 ENSDARG00000076225 183 0.93 - - - - - 0.930 - - - threonine aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-14]
23. strumpellin 212 0.928 - 0.928 - - - - - - - strumpellin
24. zgc:153722 ENSDARG00000071044, ENSDARG00000110778, ENSDARG00000113166 70 0.926 - 0.926 - - - - - - - zgc:153722 [Source:ZFIN;Acc:ZDB-GENE-060929-84]
25. ZBTB41 ENSDARG00000054984 464 0.906 - 0.906 - - - - - - - zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649]
26. calm3a ENSDARG00000015050, ENSDARG00000100825 1817 0.903 - 0.903 - - - - - - - calmodulin 3a (phosphorylase kinase, delta) [Source:ZFIN;Acc:ZDB-GENE-030131-5590]
27. si:ch211-39k3.2 ENSDARG00000075881 531 0.9 0.900 - - - - - - - - si:ch211-39k3.2 [Source:ZFIN;Acc:ZDB-GENE-070705-180]
28. fbxo32 ENSDARG00000040277 93 0.895 - 0.895 - - - - - - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
29. PTGER3 ENSDARG00000055781 187 0.894 - 0.894 - - - - - - - prostaglandin E receptor 3 (subtype EP3) [Source:ZFIN;Acc:ZDB-GENE-120508-5]
30. TMCO6 ENSDARG00000016336, ENSDARG00000111305 221 0.893 - - - - - 0.893 - - - transmembrane and coiled-coil domains 6 [Source:ZFIN;Acc:ZDB-GENE-070410-47]
31. stat2 ENSDARG00000031647, ENSDARG00000116348 441 0.889 - 0.889 - - - - - - - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
32. BX511021.3 ENSDARG00000117414 592 0.889 - 0.889 - - - - - - -
33. kcnh6 kcnh6 59 0.887 - 0.887 - - - - - - -
34. CR388015.1 CR388015.1 311 0.887 - 0.887 - - - - - - -
35. si:ch211-212k5.2 si:ch211-212k5.2 152 0.884 - 0.884 - - - - - - -
36. prkcha ENSDARG00000018382 43 0.881 - - - - - 0.881 - - - protein kinase C, eta, a [Source:ZFIN;Acc:ZDB-GENE-080402-5]
37. zgc:152891 ENSDARG00000016789 11 0.881 - - - - - 0.881 - - - zgc:152891 [Source:ZFIN;Acc:ZDB-GENE-061013-229]
38. SUN2 SUN2 86 0.88 - - - - - 0.880 - - -
39. TMPRSS7 5 0.88 - - - - - 0.880 - - - transmembrane protease, serine 7
40. ctsl.1 ENSDARG00000003902 25 0.88 - - - - - 0.880 - - - cathepsin L.1 [Source:ZFIN;Acc:ZDB-GENE-040718-61]
41. CABZ01034707.1 CABZ01034707.1 122 0.879 - - - - - 0.879 - - -
42. vent ENSDARG00000100483 74 0.879 - - - - - 0.879 - - - ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
43. ZACN ZACN 502 0.879 - 0.879 - - - - - - -
44. rab3ip ENSDARG00000101908 556 0.879 - 0.879 - - - - - - - RAB3A interacting protein (rabin3) [Source:ZFIN;Acc:ZDB-GENE-050522-323]
45. si:rp71-1i20.2 ENSDARG00000043198 113 0.879 - 0.879 - - - - - - - si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
46. si:dkey-21n8.3 si:dkey-21n8.3 5 0.879 - - - - - 0.879 - - -
47. rdh14a ENSDARG00000039299 79 0.879 - - - - - 0.879 - - - retinol dehydrogenase 14a [Source:ZFIN;Acc:ZDB-GENE-041010-124]
48. si:ch211-198e13.3 5 0.879 - - - - - 0.879 - - - si:ch211-198e13.3, transcript variant X1
49. ugt2b6 ugt2b6 111 0.877 - 0.877 - - - - - - -
50. zgc:113295_1 ENSDARG00000074768, ENSDARG00000103947 21 0.876 - 0.876 - - - - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
51. zgc:162962_1 ENSDARG00000116765 42 0.876 - - - - - 0.876 - - - zgc:162962 [Source:ZFIN;Acc:ZDB-GENE-070424-76]
52. dyx1c1 dyx1c1 36 0.876 - 0.876 - - - - - - -
53. si:dkeyp-52c3.5 si:dkeyp-52c3.5 9 0.872 - 0.872 - - - - - - -
54. ogfrl1 ENSDARG00000061223 64 0.872 - 0.872 - - - - - - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
55. kcnk1a ENSDARG00000045067 743 0.871 - 0.871 - - - - - - - potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]
56. zgc:153738 ENSDARG00000069230 84 0.871 - 0.871 - - - - - - - zgc:153738 [Source:ZFIN;Acc:ZDB-GENE-061013-622]
57. gucy1a3 89 0.87 - 0.870 - - - - - - - guanylate cyclase 1, soluble, alpha 3
58. SMIM13_1 SMIM13_1 592 0.868 - 0.868 - - - - - - -
59. cyba ENSDARG00000018283 702 0.868 - - - - - - 0.868 - - cytochrome b-245, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-1526]
60. lrrc28 ENSDARG00000057477 444 0.867 - 0.867 - - - - - - - leucine rich repeat containing 28 [Source:ZFIN;Acc:ZDB-GENE-061128-1]
61. rtn4rl1a ENSDARG00000007856 242 0.866 - 0.866 - - - - - - - reticulon 4 receptor-like 1a [Source:ZFIN;Acc:ZDB-GENE-091118-38]
62. gpr98 gpr98 717 0.866 - 0.866 - - - - - - -
63. slc12a10.3 ENSDARG00000055253 127 0.863 - 0.863 - - - - - - - slc12a10.3 solute carrier family 12 (sodium/potassium/chloride transporters), member 10, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-060503-518]
64. nudt2 ENSDARG00000058728 371 0.863 - 0.863 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
65. BX640537.1 ENSDARG00000099408 192 0.862 - - 0.862 - - - - - -
66. col7a1l ENSDARG00000069692 44 0.861 - 0.861 - - - - - - - collagen type VII alpha 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-9861]
67. casc1 ENSDARG00000016815 99 0.861 - 0.861 - - - - - - - cancer susceptibility candidate 1 [Source:ZFIN;Acc:ZDB-GENE-041210-153]
68. ddx27 ENSDARG00000091831 1471 0.86 - - - - - - 0.860 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
69. ppp1r37 ENSDARG00000078458 49 0.86 - 0.860 - - - - - - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
70. metrnl 1042 0.86 - 0.860 - - - - - - - meteorin, glial cell differentiation regulator-like
71. AL954372.1_1 ENSDARG00000112499 57 0.86 - 0.860 - - - - - - -
72. srek1ip1 ENSDARG00000043728 985 0.86 - 0.860 - - - - - - - SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
73. zdhhc16b ENSDARG00000015989 193 0.859 - 0.859 - - - - - - - zinc finger, DHHC-type containing 16b [Source:ZFIN;Acc:ZDB-GENE-040426-1301]
74. si:ch211-253p2.2 ENSDARG00000071772 64 0.859 - 0.859 - - - - - - - si:ch211-253p2.2 [Source:ZFIN;Acc:ZDB-GENE-041111-272]
75. si:ch211-207c7.6 si:ch211-207c7.6 23 0.858 - 0.858 - - - - - - -
76. slc12a10.2 ENSDARG00000071173 92 0.858 - 0.858 - - - - - - - solute carrier family 12 (sodium/potassium/chloride transporters), member 10, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-425]
77. CU929089.1 CU929089.1 479 0.857 - 0.857 - - - - - - -
78. dkk2 ENSDARG00000076420 553 0.856 - 0.856 - - - - - - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
79. zgc:174164 ENSDARG00000057138 405 0.855 0.855 - - - - - - - - zgc:174164 [Source:ZFIN;Acc:ZDB-GENE-030131-4971]
80. zgc:113100 zgc:113100 647 0.855 - 0.855 - - - - - - -
81. rasl10a ENSDARG00000062314 207 0.855 - 0.855 - - - - - - - RAS-like, family 10, member A [Source:ZFIN;Acc:ZDB-GENE-060526-273]
82. fam211ba fam211ba 202 0.854 - 0.854 - - - - - - -
83. sncgb ENSDARG00000109715 1014 0.854 - 0.854 - - - - - - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
84. ulk4 ENSDARG00000004176 85 0.853 - 0.853 - - - - - - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
85. smyhc2 ENSDARG00000099115, ENSDARG00000103969, ENSDARG00000111606 153 0.853 - - - - - 0.853 - - - slow myosin heavy chain 2 [Source:ZFIN;Acc:ZDB-GENE-070822-12]
86. klf6b ENSDARG00000038561 27 0.853 - 0.853 - - - - - - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
87. gstcd ENSDARG00000036494 95 0.852 - 0.852 - - - - - - - glutathione S-transferase, C-terminal domain containing [Source:ZFIN;Acc:ZDB-GENE-050320-41]
88. CABZ01039859.1 ENSDARG00000076361 540 0.85 - 0.850 - - - - - - - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
89. CR388046.3 ENSDARG00000105537 108 0.85 - 0.850 - - - - - - -
90. ubox5 ENSDARG00000058563 161 0.849 - 0.849 - - - - - - - U-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
91. stk25a ENSDARG00000002210 372 0.848 - 0.848 - - - - - - - serine/threonine kinase 25a [Source:ZFIN;Acc:ZDB-GENE-041010-92]
92. usp20 ENSDARG00000027501, ENSDARG00000116822 211 0.848 - 0.848 - - - - - - - ubiquitin specific peptidase 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1219]
93. vegfab ENSDARG00000034700 366 0.848 - 0.848 - - - - - - - vascular endothelial growth factor Ab [Source:ZFIN;Acc:ZDB-GENE-030131-4605]
94. CREB3L4 1085 0.846 - 0.846 - - - - - - - cAMP responsive element binding protein 3-like 4
95. rasgrp4 ENSDARG00000061796 134 0.846 0.846 - - - - - - - - RAS guanyl releasing protein 4 [Source:ZFIN;Acc:ZDB-GENE-050419-110]
96. naa30 ENSDARG00000079686 814 0.845 - 0.845 - - - - - - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081022-73]
97. hs3st1l2 ENSDARG00000035578 279 0.844 - 0.844 - - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
98. s100z ENSDARG00000038729 442 0.844 - 0.844 - - - - - - - S100 calcium binding protein Z [Source:ZFIN;Acc:ZDB-GENE-050522-69]
99. skap2 ENSDARG00000000906 146 0.844 - 0.844 - - - - - - - src kinase associated phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-438]
100. armc1l ENSDARG00000020887 1219 0.844 - 0.844 - - - - - - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]

There are 743 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA