Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for acss1

Gene Name Gene ID Reads Annotation
acss1 ENSDARG00000044142, ENSDARG00000109700 516 acyl-CoA synthetase short chain family member 1 [Source:ZFIN;Acc:ZDB-GENE-050320-139]










Genes with expression patterns similar to acss1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. acss1 ENSDARG00000044142, ENSDARG00000109700 516 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 acyl-CoA synthetase short chain family member 1 [Source:ZFIN;Acc:ZDB-GENE-050320-139]
2. si:ch211-193e13.5 ENSDARG00000052656 61 1.893 - - - - - - 0.942 0.951 - si:ch211-193e13.5 [Source:ZFIN;Acc:ZDB-GENE-081104-158]
3. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 1.846 - - - - - - 0.927 0.919 - family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
4. ubn2 ubn2 534 1.804 0.878 - - - - - - 0.926 -
5. EVA1B EVA1B 22 1.705 0.800 - - - - - 0.905 - -
6. rwdd2b ENSDARG00000055426 294 1.698 0.784 - - - - - 0.914 - - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
7. gpn2 ENSDARG00000103127 304 1.686 0.744 - - - - - 0.942 - - GPN-loop GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-86]
8. apaf1 ENSDARG00000021239 1185 1.674 - - - - - - 0.856 0.818 - apoptotic peptidase activating factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-4]
9. klhl41a ENSDARG00000068888 1034 1.671 - 0.749 - - - - - 0.922 - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
10. ROBO3_1 ROBO3_1 468 1.664 - - - - - 0.717 - 0.947 -
11. pard6b ENSDARG00000003865 990 1.656 - - - - - - 0.740 0.916 - par-6 partitioning defective 6 homolog beta (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-090312-133]
12. C3H19orf52 C3H19orf52 541 1.631 - 0.713 - - - - - 0.918 -
13. lmod1 lmod1 409 1.628 - - - - - - 0.755 0.873 -
14. ft1 ENSDARG00000059056 102 1.627 0.800 - - - - - 0.827 - - alpha(1,3)fucosyltransferase gene 1 [Source:ZFIN;Acc:ZDB-GENE-990715-17]
15. PRRT3 PRRT3 195 1.622 0.700 - - - - - - 0.922 -
16. kirrelb 383 1.617 - - - - - - 0.778 0.839 - kin of IRRE like b, transcript variant X3
17. fbxo5 ENSDARG00000039020 1284 1.606 - 0.783 - - - - - 0.823 - F-box protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4027]
18. GIGYF1 1830 1.554 - - - - - - 0.705 0.849 - GRB10 interacting GYF protein 1, transcript variant X6
19. cacna1ba ENSDARG00000021735 870 1.546 0.728 - - - - - - 0.818 - calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44]
20. fam208ab ENSDARG00000013346, ENSDARG00000113202 538 1.539 - 0.753 - - - - 0.786 - - family with sequence similarity 208, member Ab [Source:ZFIN;Acc:ZDB-GENE-090311-29]
21. nfybb ENSDARG00000045611, ENSDARG00000110926 350 1.524 0.718 - - - - - - 0.806 - nuclear transcription factor Y, beta b [Source:ZFIN;Acc:ZDB-GENE-050306-25]
22. UNKL ENSDARG00000037838 1086 1.521 - - - - - 0.746 - 0.775 - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
23. yjefn3 ENSDARG00000061692 211 1.514 - - - - - 0.761 0.753 - - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
24. nup153 ENSDARG00000099972 1462 1.499 - - - - - 0.740 - 0.759 - nucleoporin 153 [Source:ZFIN;Acc:ZDB-GENE-030131-4581]
25. znhit2 ENSDARG00000030805 197 1.498 0.771 - - - 0.727 - - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
26. twistnb ENSDARG00000024416 1077 1.485 - 0.747 - - - - - 0.738 - TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
27. klhdc10 ENSDARG00000007764 529 1.483 - - - 0.710 - 0.773 - - - kelch domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-776]
28. DHX36 ENSDARG00000101059 314 1.473 0.758 - - - 0.715 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Source:ZFIN;Acc:ZDB-GENE-050419-20]
29. lrp8 ENSDARG00000070074, ENSDARG00000116879 323 1.462 0.730 - - - - - 0.732 - - low density lipoprotein receptor-related protein 8, apolipoprotein e receptor [Source:ZFIN;Acc:ZDB-GENE-050506-134]
30. ndst3 ENSDARG00000041776 605 1.461 - - - - - 0.746 0.715 - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
31. hcfc1b ENSDARG00000012519 3633 1.452 - 0.743 - - - 0.709 - - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
32. CR407594.2 CR407594.2 145 0.969 - - - - - - 0.969 - -
33. mtx3 ENSDARG00000090195 42 0.969 - - - - - - 0.969 - - metaxin 3 [Source:ZFIN;Acc:ZDB-GENE-021210-3]
34. cdk10 ENSDARG00000034256 166 0.966 - - - - - - 0.966 - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
35. CABZ01068246.1 ENSDARG00000114719 353 0.964 - - - - - - - 0.964 -
36. prickle1a ENSDARG00000040649 700 0.964 - - - - - - - 0.964 - prickle homolog 1a [Source:ZFIN;Acc:ZDB-GENE-030724-5]
37. nudt2 ENSDARG00000058728 371 0.963 - - - - - - - 0.963 - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
38. si:ch211-110p13.9 ENSDARG00000093821 82 0.962 - - - - - - 0.962 - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
39. zgc:162297 ENSDARG00000100912, ENSDARG00000114809 12 0.962 - - - - - - 0.962 - - zgc:162297 [Source:ZFIN;Acc:ZDB-GENE-070410-62]
40. macrod1 ENSDARG00000029609 66 0.961 - - - - - - 0.961 - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
41. bcs1l ENSDARG00000012295 664 0.96 - - - - - - - 0.960 - BC1 (ubiquinol-cytochrome c reductase) synthesis-like [Source:ZFIN;Acc:ZDB-GENE-040426-938]
42. C4H12orf45 C4H12orf45 483 0.96 - - - - - - 0.960 - -
43. myo3a ENSDARG00000010186 117 0.959 - - - - - - 0.959 - - myosin IIIA [Source:ZFIN;Acc:ZDB-GENE-041026-4]
44. ZNF518B 475 0.957 - - - - - - - 0.957 - zinc finger protein 518B
45. si:dkey-182i3.9 ENSDARG00000096575 56 0.957 - - - - - - 0.957 - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
46. ITPK1 ITPK1 78 0.955 - - - - - - 0.955 - -
47. LYAR ENSDARG00000098507 1506 0.955 - - - - - - 0.955 - - Ly1 antibody reactive homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040426-1414]
48. crtac1a ENSDARG00000059826 22 0.954 - - - - - - 0.954 - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
49. hivep3b ENSDARG00000037154 114 0.953 - - - - - - 0.953 - - human immunodeficiency virus type I enhancer binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-100922-42]
50. phactr4a ENSDARG00000015552 1315 0.953 - - - - - - - 0.953 - phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
51. CABZ01041962.1 ENSDARG00000076082 690 0.953 - - - - - - - 0.953 - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
52. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 0.952 - - - - - - 0.952 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
53. otud4 ENSDARG00000077810 120 0.952 - - - - - - 0.952 - - OTU deubiquitinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5338]
54. SPAG9 ENSDARG00000078142 629 0.952 - - - - - - 0.952 - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
55. rin1a ENSDARG00000079095 99 0.952 - - - - - - 0.952 - - Ras and Rab interactor 1a [Source:ZFIN;Acc:ZDB-GENE-091204-129]
56. slc30a10 ENSDARG00000103983 46 0.952 - - - - - - 0.952 - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
57. gnptg ENSDARG00000038566 259 0.952 - - - - - - 0.952 - - N-acetylglucosamine-1-phosphate transferase subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040625-18]
58. si:dkey-7l6.3 ENSDARG00000094514 146 0.951 - - - - - - 0.951 - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
59. zgc:136474 zgc:136474 658 0.95 - - - - - - - 0.950 -
60. fbxl20 ENSDARG00000075567 138 0.95 - - - - - - - 0.950 - F-box and leucine-rich repeat protein 20 [Source:ZFIN;Acc:ZDB-GENE-081031-27]
61. BX571811.1 ENSDARG00000105621 25 0.95 - - - - - - 0.950 - -
62. si:ch211-233h19.2 ENSDARG00000042213 47 0.95 - - - - - - - 0.950 - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
63. zgc:113336 ENSDARG00000104078 147 0.949 - - - - - - - 0.949 - zgc:113336 [Source:ZFIN;Acc:ZDB-GENE-050320-55]
64. si:dkey-242e21.3 ENSDARG00000075723 77 0.949 - - - - - - - 0.949 - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
65. C22H19orf44 C22H19orf44 481 0.949 - - - - - - - 0.949 -
66. zgc:171489 ENSDARG00000052300 119 0.949 - - - - - - 0.949 - - zgc:171489 [Source:ZFIN;Acc:ZDB-GENE-080303-25]
67. pigm ENSDARG00000024277 86 0.949 - - - - - - - 0.949 - phosphatidylinositol glycan anchor biosynthesis, class M [Source:ZFIN;Acc:ZDB-GENE-040426-1393]
68. CR847543.1 ENSDARG00000086708 155 0.949 - - - - - - - 0.949 -
69. si:dkey-9i5.1 si:dkey-9i5.1 36 0.948 - - - - - - - 0.948 -
70. CR388228.1 ENSDARG00000117809 31 0.948 - - - - - - - 0.948 - uncharacterized LOC110437756 [Source:NCBI gene;Acc:110437756]
71. si:ch211-173p18.3_1 ENSDARG00000035821 36 0.948 - - - - - - - 0.948 - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
72. dnase1 ENSDARG00000012539 65 0.948 - - - - - - - 0.948 - deoxyribonuclease I [Source:ZFIN;Acc:ZDB-GENE-040718-423]
73. meiob 75 0.948 - - - - - - - 0.948 - meiosis specific with OB domains
74. si:dkeyp-87d1.1 ENSDARG00000104681 35 0.948 - - - - - - - 0.948 - si:dkeyp-87d1.1 [Source:ZFIN;Acc:ZDB-GENE-041014-75]
75. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 0.948 - - - - - - 0.948 - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
76. si:ch211-106g4.2 si:ch211-106g4.2 6 0.948 - - - - - - 0.948 - -
77. ccdc41 ccdc41 97 0.948 - - - - - - - 0.948 -
78. saga ENSDARG00000012610 63 0.948 - - - - - - 0.948 - - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
79. zpcx ENSDARG00000059252, ENSDARG00000111002 33 0.948 - - - - - - - 0.948 - zona pellucida protein C [Source:ZFIN;Acc:ZDB-GENE-040824-1]
80. mxtx1 ENSDARG00000069382 32 0.948 - - - - - - 0.948 - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
81. si:dkey-11f4.20 ENSDARG00000100887 38 0.948 - - - - - - - 0.948 - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
82. si:ch211-218m3.16 ENSDARG00000044336 33 0.948 - - - - - - - 0.948 - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
83. CR848025.1 ENSDARG00000100501 35 0.948 - - - - - - - 0.948 - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
84. si:ch211-38m6.6 ENSDARG00000076959 12 0.948 - - - - - - 0.948 - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
85. CABZ01058107.1 ENSDARG00000112826 8 0.948 - - - - - - 0.948 - - C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085]
86. HIST2H4A HIST2H4A 33 0.948 - - - - - - 0.948 - -
87. ftr56 ENSDARG00000030954 23 0.948 - - - - - - 0.948 - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
88. KCNK7 ENSDARG00000057331 5 0.948 - - - - - - 0.948 - - potassium channel, subfamily K, member 7 [Source:ZFIN;Acc:ZDB-GENE-110304-2]
89. GIPR ENSDARG00000025478 87 0.948 - - - - - - - 0.948 - gastric inhibitory polypeptide receptor [Source:ZFIN;Acc:ZDB-GENE-050516-4]
90. MSH4 ENSDARG00000075826 37 0.948 - - - - - - - 0.948 - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
91. si:dkey-10c21.1 ENSDARG00000079133 32 0.948 - - - - - - - 0.948 - si:dkey-10c21.1 [Source:ZFIN;Acc:ZDB-GENE-081104-302]
92. PIK3R6 PIK3R6 149 0.947 - - - - - - - 0.947 -
93. pak1ip1 ENSDARG00000044488 1995 0.947 - - - - - - - 0.947 - PAK1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8414]
94. si:ch211-229b6.1 ENSDARG00000093422 151 0.947 - - - - - - 0.947 - - si:ch211-229b6.1 [Source:ZFIN;Acc:ZDB-GENE-060503-311]
95. nmu ENSDARG00000043299 67 0.947 - - - - - - - 0.947 - neuromedin U [Source:ZFIN;Acc:ZDB-GENE-041001-111]
96. fancg ENSDARG00000024967, ENSDARG00000113462 82 0.947 - - - - - - - 0.947 - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
97. rad9a ENSDARG00000056984, ENSDARG00000115514 152 0.947 - - - - - - - 0.947 - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
98. tmem187 ENSDARG00000051989 136 0.947 - - - - - - 0.947 - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
99. si:ch211-214b16.4 ENSDARG00000074345 261 0.947 - - - - - - - 0.947 - si:ch211-214b16.4 [Source:ZFIN;Acc:ZDB-GENE-081105-53]
100. htr3b ENSDARG00000061749 49 0.946 - - - - - - - 0.946 - 5-hydroxytryptamine (serotonin) receptor 3B [Source:ZFIN;Acc:ZDB-GENE-071012-4]

There are 1224 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA