Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for acsl3b

Gene Name Gene ID Reads Annotation
acsl3b ENSDARG00000014674 3748 acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]










Genes with expression patterns similar to acsl3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. acsl3b ENSDARG00000014674 3748 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
2. skp1 ENSDARG00000003151 8172 2.483 - 0.993 - - - 0.754 - - 0.736 S-phase kinase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1707]
3. tceb1b 14935 2.309 - - - 0.898 - - 0.702 - 0.709 transcription elongation factor B (SIII), polypeptide 1b
4. uba1 ENSDARG00000037559 11579 2.212 - - - - 0.732 0.748 0.732 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
5. wasf3 wasf3 3287 1.758 - 0.995 - - - 0.763 - - -
6. rpl5a ENSDARG00000020197 35209 1.746 - 0.810 - 0.936 - - - - - ribosomal protein L5a [Source:ZFIN;Acc:ZDB-GENE-030131-5161]
7. hoxb4a ENSDARG00000013533 3857 1.741 - - - 0.997 - 0.744 - - - homeobox B4a [Source:ZFIN;Acc:ZDB-GENE-990415-105]
8. ACVR1B ACVR1B 4824 1.74 - 0.996 - - - - - - 0.744
9. AGO1 ENSDARG00000092644 4521 1.739 - - - 0.994 - 0.745 - - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
10. CU929431.1 CU929431.1 2234 1.732 - - - 0.997 - - - 0.735 -
11. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.723 - - - 0.997 - - - - 0.726 CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
12. dnajc5aa ENSDARG00000042948 2885 1.715 - 0.997 - - - 0.718 - - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
13. smo ENSDARG00000002952 6411 1.71 - 0.993 - - - 0.717 - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
14. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.709 - - - 0.997 - - - 0.712 - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
15. nxn ENSDARG00000033978, ENSDARG00000115888 1683 1.708 - 0.998 - - - 0.710 - - - nucleoredoxin [Source:ZFIN;Acc:ZDB-GENE-050522-75]
16. smc1al ENSDARG00000058203 8838 1.705 - - 0.714 0.991 - - - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
17. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.695 - 0.977 - - - 0.718 - - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
18. ywhabb ENSDARG00000075758 23104 1.676 - 0.705 - 0.971 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
19. pl10 pl10 10795 1.662 - - - - - 0.809 0.853 - -
20. pfn2l ENSDARG00000012682 21690 1.652 - 0.869 - - - - 0.783 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
21. gdi2 ENSDARG00000005451, ENSDARG00000113039 11258 1.642 - 0.936 - - - - - - 0.706 GDP dissociation inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2485]
22. tnrc6b ENSDARG00000074161 4597 1.579 - 0.840 - - - - 0.739 - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
23. RBM33 RBM33 1954 1.546 - - - - - 0.803 0.743 - -
24. whsc1l1 8544 1.545 - - - - - 0.745 0.800 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
25. nsd1a ENSDARG00000060016 2974 1.527 - - - - - 0.753 0.774 - - nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
26. cox6b2 ENSDARG00000037860 33134 1.514 - 0.755 - 0.759 - - - - - cytochrome c oxidase subunit 6B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1566]
27. actr1 ENSDARG00000011611 3879 1.498 - - - - - 0.736 - 0.762 - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
28. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 1.491 - - - - - - 0.703 0.788 - Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
29. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.486 - - - - - 0.717 0.769 - - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
30. rtca ENSDARG00000002215 3558 1.485 - - - - - 0.757 - - 0.728 RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
31. lmnb1 ENSDARG00000044299 9817 1.484 - - - - - 0.766 0.718 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
32. ak2 ENSDARG00000005926 7598 1.482 - - - - - - - 0.732 0.750 adenylate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-512]
33. gps1 ENSDARG00000040650 3893 1.477 - - - - - 0.720 - - 0.757 G protein pathway suppressor 1 [Source:ZFIN;Acc:ZDB-GENE-041111-240]
34. cdc25 cdc25 3913 1.476 - - - - - - 0.704 0.772 -
35. si:ch211-161h7.4 ENSDARG00000087238 4399 1.475 - - - - - 0.765 - - 0.710 si:ch211-161h7.4 [Source:ZFIN;Acc:ZDB-GENE-091118-108]
36. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.472 - - 0.724 - - - 0.748 - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
37. ENDOD1_5 ENDOD1_5 8723 1.47 - - 0.758 - - 0.712 - - -
38. SNRPG ENSDARG00000099667 18697 1.469 - - - - - - 0.702 - 0.767 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
39. rsrc2 ENSDARG00000042534 1756 1.458 - - - - - 0.703 0.755 - - arginine/serine-rich coiled-coil 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2457]
40. srsf4 ENSDARG00000105293 9657 1.453 - - - - - 0.703 0.750 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
41. ss18 ENSDARG00000002970 2618 1.451 - - - - - 0.706 0.745 - - synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
42. ddx39ab ENSDARG00000015111 11619 1.442 - - - - - 0.736 0.706 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
43. ssbp4 ENSDARG00000056483 10196 1.44 - - - - - 0.724 0.716 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
44. arl14ep ENSDARG00000001210 3029 1.439 - - 0.708 - - - 0.731 - - ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
45. smarca5 ENSDARG00000052348 15433 1.437 - - - - - 0.710 0.727 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
46. arl8a ENSDARG00000078686 4379 1.436 - - - - - - - 0.710 0.726 ADP-ribosylation factor-like 8A [Source:ZFIN;Acc:ZDB-GENE-030131-5025]
47. mapre1b ENSDARG00000002659 9119 1.433 - - - - - 0.721 - - 0.712 microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
48. NIPBL NIPBL 871 1.431 - - - - - 0.708 0.723 - -
49. med31 ENSDARG00000008020 4161 1.429 - 0.701 - - - - - - 0.728 mediator complex subunit 31 [Source:ZFIN;Acc:ZDB-GENE-040718-114]
50. LEPROTL1 ENSDARG00000104871 3019 1.424 - - - - - 0.711 0.713 - - leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
51. spcs2 ENSDARG00000042823 10032 1.422 - - - - - 0.717 0.705 - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
52. creb1a ENSDARG00000053586 5068 1.419 - - - - - 0.703 - - 0.716 cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
53. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.417 - - - - - 0.709 0.708 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
54. myef2 ENSDARG00000059398 6050 1.416 - - - - - - 0.712 - 0.704 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
55. med10 ENSDARG00000070623 5134 1.415 - - - - - - 0.706 - 0.709 mediator complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-070117-2423]
56. arfgef2 ENSDARG00000074702 1593 0.999 - 0.999 - - - - - - - ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-090312-50]
57. CR388095.3 CR388095.3 2548 0.998 - - - 0.998 - - - - -
58. EPT1 EPT1 1912 0.998 - - - 0.998 - - - - -
59. slc38a5a ENSDARG00000009901 2527 0.998 - 0.998 - - - - - - - solute carrier family 38, member 5a [Source:ZFIN;Acc:ZDB-GENE-081105-92]
60. camsap2 camsap2 1448 0.998 - - - 0.998 - - - - -
61. mpi ENSDARG00000030786 3052 0.998 - - - 0.998 - - - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
62. vash2 ENSDARG00000007774 2537 0.998 - 0.998 - - - - - - - vasohibin 2 [Source:ZFIN;Acc:ZDB-GENE-041014-355]
63. idh3g ENSDARG00000023648 4877 0.997 - - - 0.997 - - - - - isocitrate dehydrogenase 3 (NAD+) gamma [Source:ZFIN;Acc:ZDB-GENE-050417-435]
64. b3gnt5b ENSDARG00000004396 1152 0.997 - - - 0.997 - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5b [Source:ZFIN;Acc:ZDB-GENE-041010-166]
65. ARHGAP23 ARHGAP23 3946 0.997 - - - 0.997 - - - - -
66. txndc5 ENSDARG00000009342 5387 0.997 - - - 0.997 - - - - - thioredoxin domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1951]
67. wu:fc47e11 539 0.997 - 0.997 - - - - - - - wu:fc47e11
68. oxa1l ENSDARG00000069313, ENSDARG00000113799 1687 0.997 - 0.997 - - - - - - - oxidase (cytochrome c) assembly 1-like [Source:ZFIN;Acc:ZDB-GENE-071004-49]
69. sipa1l2 ENSDARG00000061640 4545 0.997 - 0.997 - - - - - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
70. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.997 - 0.997 - - - - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
71. atoh8 ENSDARG00000037555, ENSDARG00000110248 2059 0.997 - - - 0.997 - - - - - atonal bHLH transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-061215-7]
72. mertk mertk 1232 0.997 - - - 0.997 - - - - -
73. herpud2 ENSDARG00000021033 1800 0.997 - - - 0.997 - - - - - HERPUD family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-868]
74. FAM35A FAM35A 1091 0.997 - - - 0.997 - - - - -
75. serbp1a ENSDARG00000074242 10818 0.997 - - - 0.997 - - - - - SERPINE1 mRNA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7389]
76. tchp ENSDARG00000035605 1695 0.997 - - - 0.997 - - - - - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
77. SCARF2 1117 0.997 - 0.997 - - - - - - - scavenger receptor class F, member 2
78. polr2d ENSDARG00000076509 3386 0.997 - 0.997 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
79. dre-mir-26a-2 ENSDARG00000086601 1267 0.997 - - - 0.997 - - - - - dre-mir-26a-2 [Source:miRBase;Acc:MI0001925]
80. camkmt ENSDARG00000095224 1204 0.997 - - - 0.997 - - - - - calmodulin-lysine N-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-090313-49]
81. pycr1 pycr1 1258 0.997 - - - 0.997 - - - - -
82. slc15a4 ENSDARG00000102612 1096 0.997 - - - 0.997 - - - - - solute carrier family 15 (oligopeptide transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1047]
83. taf5 ENSDARG00000018325 1363 0.996 - 0.996 - - - - - - - TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
84. dnajc18 ENSDARG00000056005 8084 0.996 - 0.996 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 18 [Source:ZFIN;Acc:ZDB-GENE-030131-8019]
85. CU463857.1 CU463857.1 5541 0.996 - - - 0.996 - - - - -
86. mettl16 ENSDARG00000055838 818 0.996 - 0.996 - - - - - - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
87. atraid ENSDARG00000043388 648 0.996 - 0.996 - - - - - - - all-trans retinoic acid-induced differentiation factor [Source:ZFIN;Acc:ZDB-GENE-040724-177]
88. tbl1x ENSDARG00000060438 1386 0.996 - 0.996 - - - - - - - transducin beta like 1 X-linked [Source:ZFIN;Acc:ZDB-GENE-070209-131]
89. PLEKHG1 2100 0.996 - 0.996 - - - - - - - pleckstrin homology and RhoGEF domain containing G1, transcript variant X2
90. CR352249.1 ENSDARG00000114701 857 0.996 - 0.996 - - - - - - - solute carrier family 38, member 8b [Source:NCBI gene;Acc:795255]
91. dynll2a ENSDARG00000069790, ENSDARG00000114539 2328 0.996 - 0.996 - - - - - - - dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11]
92. rhoae rhoae 4047 0.996 - - - 0.996 - - - - -
93. uba5 ENSDARG00000063588 1260 0.996 - 0.996 - - - - - - - ubiquitin-like modifier activating enzyme 5 [Source:ZFIN;Acc:ZDB-GENE-031112-2]
94. and3 ENSDARG00000056873 22650 0.996 - 0.996 - - - - - - - actinodin3 [Source:ZFIN;Acc:ZDB-GENE-040724-185]
95. TSPY2 TSPY2 1371 0.996 - 0.996 - - - - - - -
96. dcxr ENSDARG00000079271 3289 0.996 - - - 0.996 - - - - - dicarbonyl/L-xylulose reductase [Source:ZFIN;Acc:ZDB-GENE-030131-7002]
97. map3k1 ENSDARG00000098405 3043 0.996 - - - 0.996 - - - - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
98. pnpla7a ENSDARG00000062986 1793 0.996 - - - 0.996 - - - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
99. gprc5c ENSDARG00000100862 457 0.996 - 0.996 - - - - - - - G protein-coupled receptor, class C, group 5, member C [Source:ZFIN;Acc:ZDB-GENE-070928-27]
100. malt1a malt1a 903 0.996 - 0.996 - - - - - - -

There are 633 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA