Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for acin1b

Gene Name Gene ID Reads Annotation
acin1b ENSDARG00000026842 3806 apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]










Genes with expression patterns similar to acin1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. acin1b ENSDARG00000026842 3806 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
2. csnk1g2b ENSDARG00000034056, ENSDARG00000114050 3502 2.494 - 0.847 0.782 - - - 0.865 - - casein kinase 1, gamma 2b [Source:ZFIN;Acc:ZDB-GENE-060825-285]
3. sp3a ENSDARG00000001549 1994 2.391 - 0.765 0.878 - - - 0.748 - - sp3a transcription factor [Source:ZFIN;Acc:ZDB-GENE-070410-111]
4. etv4 ENSDARG00000018303, ENSDARG00000115855 3889 2.377 - - 0.894 - - 0.771 0.712 - - ets variant 4 [Source:ZFIN;Acc:ZDB-GENE-990415-71]
5. psma2 ENSDARG00000040121 2504 2.353 - - - - - 0.792 0.816 0.745 - proteasome subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-050522-479]
6. CR388231.3 ENSDARG00000105601 2404 2.311 - 0.781 0.782 - - 0.748 - - -
7. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.875 - - 0.876 - - - - - 0.999 proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
8. dhx8 ENSDARG00000054707 2088 1.835 - - - - - - - 0.836 0.999 DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-050809-39]
9. atp13a atp13a 2867 1.823 - - 0.824 - - - - - 0.999
10. zc3h15 ENSDARG00000015889 3861 1.804 - - 0.805 - - - - - 0.999 zinc finger CCCH-type containing 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6239]
11. sorbs1 ENSDARG00000103435 2297 1.756 - 0.757 - - - - - - 0.999 sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
12. rapgef1a ENSDARG00000043593 416 1.752 - - 0.929 - - - - 0.823 - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
13. strn3 ENSDARG00000001729 4608 1.748 - - - - - - 0.763 - 0.985 striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]
14. nmrk2 ENSDARG00000067848 10293 1.734 - 0.754 - - - - - - 0.980 nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
15. si:ch211-218d20.13 si:ch211-218d20.13 5488 1.715 - - 0.889 - - - - - 0.826
16. map3k7 ENSDARG00000020469 2845 1.712 - - 0.933 - - - 0.779 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
17. ilk ENSDARG00000056964 6686 1.709 - 0.715 - - - - - - 0.994 integrin-linked kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1435]
18. rcbtb2 ENSDARG00000090687 1658 1.706 - 0.776 0.930 - - - - - - regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
19. prkar1aa ENSDARG00000076128 6565 1.694 - - 0.901 - - - 0.793 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
20. samm50 ENSDARG00000045814 4511 1.688 - 0.837 - - - - - 0.851 - SAMM50 sorting and assembly machinery component [Source:ZFIN;Acc:ZDB-GENE-040426-806]
21. setb ENSDARG00000003920 21788 1.68 - - - - - 0.715 - - 0.965 SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
22. PPP1R8 PPP1R8 1897 1.678 - 0.778 0.900 - - - - - -
23. slc30a1a ENSDARG00000005463 1011 1.678 - - 0.921 - - 0.757 - - - solute carrier family 30 (zinc transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1840]
24. eif3c ENSDARG00000016443 18003 1.677 - - - - - - - 0.717 0.960 eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
25. slc25a3b ENSDARG00000025566 32264 1.674 - - - - - - - 0.736 0.938 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1916]
26. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.658 - - 0.889 - - 0.769 - - - euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
27. suco ENSDARG00000016532 1609 1.642 - - 0.827 - - - - 0.815 - SUN domain containing ossification factor [Source:ZFIN;Acc:ZDB-GENE-030131-2941]
28. ap1s1 ENSDARG00000056803 3854 1.634 - 0.722 0.912 - - - - - - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
29. rerea ENSDARG00000077353 4162 1.632 - - 0.856 - - - 0.776 - - arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
30. antxr1c ENSDARG00000063612 3203 1.63 - - 0.930 - - - 0.700 - - ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
31. Mar-02 Mar-02 1812 1.617 - - 0.884 - - - 0.733 - -
32. hsbp1b ENSDARG00000041921 6170 1.612 - 0.818 - - - 0.794 - - - heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
33. polr2d ENSDARG00000076509 3386 1.611 - - - - - 0.878 0.733 - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
34. tmub1 ENSDARG00000038787 1012 1.598 - 0.706 0.892 - - - - - - transmembrane and ubiquitin-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2504]
35. cdc5l ENSDARG00000043797 985 1.598 - 0.722 0.876 - - - - - - CDC5 cell division cycle 5-like (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-821]
36. ralgps2 ENSDARG00000026519 1610 1.597 - - 0.835 - - - 0.762 - - Ral GEF with PH domain and SH3 binding motif 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1212]
37. nkap ENSDARG00000033450, ENSDARG00000116152 1929 1.593 - - 0.855 - - - 0.738 - - NFKB activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-8064]
38. mccc1 ENSDARG00000102538, ENSDARG00000115996 2069 1.59 - 0.700 - - - 0.890 - - - methylcrotonoyl-CoA carboxylase 1 (alpha) [Source:ZFIN;Acc:ZDB-GENE-050208-450]
39. ift46 ENSDARG00000011240 2499 1.588 - - - - - 0.756 - 0.832 - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
40. g3bp1 ENSDARG00000017741 7622 1.588 - 0.842 - - - 0.746 - - - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
41. psmc1a ENSDARG00000030537 2799 1.588 - 0.824 0.764 - - - - - - proteasome 26S subunit, ATPase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8730]
42. tead3a ENSDARG00000074321 2240 1.586 - - 0.825 - - - 0.761 - - TEA domain family member 3 a [Source:ZFIN;Acc:ZDB-GENE-031112-10]
43. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.585 - 0.719 0.866 - - - - - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
44. psat1 ENSDARG00000016733 8084 1.583 - - 0.753 - - - 0.830 - - phosphoserine aminotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5723]
45. snrpe ENSDARG00000033175 7462 1.579 - 0.827 - - - 0.752 - - - small nuclear ribonucleoprotein polypeptide E [Source:ZFIN;Acc:ZDB-GENE-040426-1112]
46. galnt1 ENSDARG00000061335 1648 1.571 - 0.800 - - - - 0.771 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
47. puf60b ENSDARG00000001241 13827 1.565 - - - - - 0.790 - 0.775 - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
48. myef2 ENSDARG00000059398 6050 1.564 - 0.754 - - - - - 0.810 - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
49. phldb1a ENSDARG00000061093 1637 1.563 0.702 - 0.861 - - - - - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
50. srgap1 srgap1 2320 1.562 - - 0.817 - - - 0.745 - -
51. wwtr1 ENSDARG00000067719 3484 1.559 - - - - - - 0.821 0.738 - WW domain containing transcription regulator 1 [Source:ZFIN;Acc:ZDB-GENE-051101-1]
52. ube2kb ENSDARG00000013505, ENSDARG00000114039 3968 1.556 - - - - - - 0.718 0.838 - ubiquitin-conjugating enzyme E2Kb (UBC1 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-980605-9]
53. kctd6b ENSDARG00000023703, ENSDARG00000116734 2621 1.556 - - 0.773 - - 0.783 - - - potassium channel tetramerization domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040718-14]
54. c1d ENSDARG00000021112 2839 1.556 - - - - - - 0.754 0.802 - C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
55. tmem167a ENSDARG00000035914 3319 1.548 - - - - - 0.764 0.784 - - transmembrane protein 167A [Source:ZFIN;Acc:ZDB-GENE-050320-29]
56. paf1 ENSDARG00000098432 1806 1.541 - 0.809 - - - 0.732 - - - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
57. CHMP4B CHMP4B 1387 1.54 - - - - - 0.715 - 0.825 -
58. rbm8a ENSDARG00000016516 8789 1.538 - - - - - - 0.824 0.714 - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
59. CU929408.1 CU929408.1 714 1.537 - 0.704 - - - - 0.833 - -
60. PRKDC ENSDARG00000075083 693 1.526 - - - - - - 0.713 0.813 - protein kinase, DNA-activated, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9008]
61. atp5ia 4773 1.518 - - - - - 0.815 0.703 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
62. GTSE1 ENSDARG00000013719 1115 1.516 - - - - - 0.732 - 0.784 - G-2 and S-phase expressed 1 [Source:ZFIN;Acc:ZDB-GENE-050522-493]
63. fip1l1b ENSDARG00000070431 1677 1.513 - 0.761 - - - - 0.752 - - FIP1 like 1b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041010-138]
64. psmc1b ENSDARG00000043561, ENSDARG00000112404 2148 1.513 - 0.740 0.773 - - - - - - proteasome 26S subunit, ATPase 1b [Source:ZFIN;Acc:ZDB-GENE-040625-69]
65. mrpl3 ENSDARG00000103318 2308 1.513 - - 0.752 - - - 0.761 - - mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
66. fam46c 1913 1.512 - 0.704 0.808 - - - - - - family with sequence similarity 46, member C
67. ezh2 ENSDARG00000010571 3273 1.511 - 0.739 - - - 0.772 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
68. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.511 - 0.761 - - - - 0.750 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
69. ccdc47 ENSDARG00000054362 5970 1.506 - 0.790 - - - - 0.716 - - coiled-coil domain containing 47 [Source:ZFIN;Acc:ZDB-GENE-040912-15]
70. polr2j ENSDARG00000035146 1493 1.506 - - - - - 0.727 0.779 - - polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]
71. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.505 - - - - - - 0.732 0.773 - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
72. igfbp5b ENSDARG00000025348 3803 1.502 - 0.793 0.709 - - - - - - insulin-like growth factor binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-040319-2]
73. CYYR1 ENSDARG00000103783 4107 1.501 - - - - - 0.773 0.728 - - cysteine/tyrosine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2356]
74. fgfr1a ENSDARG00000011027 2705 1.499 - - 0.770 - - - 0.729 - - fibroblast growth factor receptor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-255]
75. U2_6 U2_6 1155 1.498 - 0.781 - - - - 0.717 - -
76. top2a ENSDARG00000024488 4273 1.496 - - 0.714 - - - - 0.782 - DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
77. ebf3 ebf3 4238 1.496 - 0.721 - - - - - 0.775 -
78. fzr1 fzr1 2984 1.496 - 0.717 - - - 0.779 - - -
79. eif3m ENSDARG00000013931 8117 1.495 - 0.708 - - - - - 0.787 - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
80. srsf5a ENSDARG00000029818 15600 1.495 - - 0.776 - - - - - 0.719 serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
81. cth ENSDARG00000074301 3860 1.493 - 0.722 - - - 0.771 - - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
82. eif3jb ENSDARG00000053370 1776 1.49 - 0.733 - - - - 0.757 - - eukaryotic translation initiation factor 3, subunit Jb [Source:ZFIN;Acc:ZDB-GENE-040426-2900]
83. EEF1E1 ENSDARG00000071774 3806 1.49 0.739 0.751 - - - - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
84. SERBP1 SERBP1 9276 1.489 - 0.717 - - - 0.772 - - -
85. brd3b ENSDARG00000100129 6387 1.489 - - - - - 0.770 0.719 - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
86. prpf4bb ENSDARG00000040310 2260 1.489 - - - - - 0.752 0.737 - - pre-mRNA processing factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2799]
87. copa ENSDARG00000004173 3977 1.486 - - 0.752 - - - 0.734 - - coatomer protein complex, subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020905-2]
88. MRPL52 ENSDARG00000090568 4402 1.48 - - 0.756 - - - - - 0.724 mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
89. gnai1 ENSDARG00000021647 1548 1.48 - 0.765 - - - - 0.715 - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1310]
90. C13H10orf71 3489 1.477 - 0.732 - - - 0.745 - - - chromosome 13 C10orf71 homolog
91. nr2f6b ENSDARG00000003165 5855 1.475 - 0.759 - - - 0.716 - - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
92. C2H6orf52 C2H6orf52 2847 1.47 - 0.723 - - - - - 0.747 -
93. KIAA0355 3250 1.469 - - - - - 0.735 0.734 - - KIAA0355 ortholog, transcript variant X1
94. efnb3b ENSDARG00000042277 5823 1.467 - 0.715 - - - 0.752 - - - ephrin-B3b [Source:ZFIN;Acc:ZDB-GENE-010618-3]
95. cdca8 ENSDARG00000043137 7541 1.463 - - - - - 0.733 0.730 - - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
96. hsd17b10 ENSDARG00000017781 1793 1.455 0.735 0.720 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:ZFIN;Acc:ZDB-GENE-041010-201]
97. midn ENSDARG00000018524 7559 1.454 - 0.738 - - - - 0.716 - - midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
98. zmpste24 ENSDARG00000044090, ENSDARG00000115387 3873 1.451 - - 0.707 - - 0.744 - - - zinc metallopeptidase, STE24 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-6312]
99. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.451 - - - - - 0.721 0.730 - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
100. acsbg2 ENSDARG00000004094 2445 1.449 - 0.719 - - - 0.730 - - - acyl-CoA synthetase bubblegum family member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7099]

There are 1423 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA