Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for accs

Gene Name Gene ID Reads Annotation
accs ENSDARG00000052124 294 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) [Source:ZFIN;Acc:ZDB-GENE-050327-39]










Genes with expression patterns similar to accs

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. accs ENSDARG00000052124 294 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) [Source:ZFIN;Acc:ZDB-GENE-050327-39]
2. CU074314.1 CU074314.1 354 1.652 - - - - - - 0.890 0.762 -
3. exosc2 ENSDARG00000028688 726 1.625 - - - - - - 0.878 0.747 - exosome component 2 [Source:ZFIN;Acc:ZDB-GENE-050417-27]
4. gpr63 ENSDARG00000074540 242 1.603 - 0.838 - - - - - 0.765 - G protein-coupled receptor 63 [Source:ZFIN;Acc:ZDB-GENE-110411-183]
5. prr18 ENSDARG00000093768 409 1.58 - 0.810 - - - - - 0.770 - proline rich 18 [Source:ZFIN;Acc:ZDB-GENE-081107-6]
6. saga ENSDARG00000012610 63 1.529 - - - - - - 0.703 0.826 - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
7. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 1.521 - - - - - - 0.791 0.730 - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
8. AP5Z1 ENSDARG00000078111 91 1.519 0.702 0.817 - - - - - - - adaptor related protein complex 5 subunit zeta 1 [Source:ZFIN;Acc:ZDB-GENE-120508-2]
9. LRRC4C ENSDARG00000113411 36 1.511 0.702 - - - - - - 0.809 - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
10. nrgna ENSDARG00000039626 50 1.51 - - - - - 0.701 - 0.809 - neurogranin (protein kinase C substrate, RC3) a [Source:ZFIN;Acc:ZDB-GENE-090710-4]
11. EPC1 EPC1 500 1.504 - 0.718 - - - 0.786 - - -
12. si:dkey-79c1.1 ENSDARG00000093179 11 1.504 0.702 0.802 - - - - - - - si:dkey-79c1.1 [Source:ZFIN;Acc:ZDB-GENE-060531-153]
13. tmem196b ENSDARG00000090140 20 1.5 0.702 - - - - - - 0.798 - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
14. rnf146 ENSDARG00000089981 715 1.494 - - - - - 0.735 - 0.759 - ring finger protein 146 [Source:ZFIN;Acc:ZDB-GENE-030131-5997]
15. INO80B ENSDARG00000062749 844 1.489 - 0.719 - - - - 0.770 - - INO80 complex subunit B [Source:ZFIN;Acc:ZDB-GENE-061013-69]
16. xpc ENSDARG00000039754 515 1.465 - 0.722 - - - 0.743 - - - xeroderma pigmentosum, complementation group C [Source:ZFIN;Acc:ZDB-GENE-030131-8461]
17. si:ch1073-127d16.1 ENSDARG00000087674 105 1.462 - 0.749 - - - 0.713 - - - si:ch1073-127d16.1 [Source:ZFIN;Acc:ZDB-GENE-120214-30]
18. CSMD1 CSMD1 15 1.434 0.702 - - - - 0.732 - - -
19. si:ch211-14c7.2 ENSDARG00000094522 369 1.422 - 0.711 - - - - - 0.711 - si:ch211-14c7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-856]
20. zdhhc7 ENSDARG00000019484 160 0.955 - - - - - - 0.955 - - zinc finger, DHHC-type containing 7 [Source:ZFIN;Acc:ZDB-GENE-040718-346]
21. GPR45 ENSDARG00000063357 57 0.949 0.949 - - - - - - - - G protein-coupled receptor 45 [Source:HGNC Symbol;Acc:HGNC:4503]
22. si:dkey-11c5.14 si:dkey-11c5.14 15 0.949 0.949 - - - - - - - -
23. twist1b ENSDARG00000076010 88 0.949 0.949 - - - - - - - - twist family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-050417-357]
24. TECPR1 TECPR1 173 0.949 0.949 - - - - - - - -
25. CR788231.1 CR788231.1 61 0.949 0.949 - - - - - - - -
26. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 0.949 0.949 - - - - - - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
27. adal ENSDARG00000012986, ENSDARG00000111306 77 0.949 0.949 - - - - - - - - adenosine deaminase-like [Source:ZFIN;Acc:ZDB-GENE-050913-145]
28. si:ch211-281p14.2 22 0.949 0.949 - - - - - - - - si:ch211-281p14.2, transcript variant X2
29. si:dkey-32e23.4 ENSDARG00000063159 28 0.949 0.949 - - - - - - - - si:dkey-32e23.4 [Source:ZFIN;Acc:ZDB-GENE-081105-41]
30. MYOM2_1 MYOM2_1 4054 0.931 - 0.931 - - - - - - -
31. ADAMTS2 ENSDARG00000075930 7 0.919 0.919 - - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 2 [Source:ZFIN;Acc:ZDB-GENE-070816-3]
32. alkbh6 ENSDARG00000077253 117 0.919 0.919 - - - - - - - - alkB homolog 6 [Source:ZFIN;Acc:ZDB-GENE-060407-1]
33. zgc:110410 ENSDARG00000055138 67 0.916 - - - - - - 0.916 - - zgc:110410 [Source:ZFIN;Acc:ZDB-GENE-050522-465]
34. timm44 ENSDARG00000104771 98 0.907 0.907 - - - - - - - - translocase of inner mitochondrial membrane 44 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-145]
35. lrrc42 ENSDARG00000030591 156 0.903 - - - - - 0.903 - - - leucine rich repeat containing 42 [Source:ZFIN;Acc:ZDB-GENE-030131-4992]
36. mxra8a ENSDARG00000062222 530 0.903 - 0.903 - - - - - - - matrix-remodelling associated 8a [Source:ZFIN;Acc:ZDB-GENE-060503-671]
37. nucb2b ENSDARG00000036291 911 0.901 - - - - - - 0.901 - - nucleobindin 2b [Source:ZFIN;Acc:ZDB-GENE-030131-4775]
38. SYTL1 ENSDARG00000070094 282 0.896 - - - - - - 0.896 - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
39. CU459084.1 CU459084.1 4 0.89 0.890 - - - - - - - -
40. TAF4_1 TAF4_1 30 0.889 - 0.889 - - - - - - -
41. ube2j1 ENSDARG00000033489 497 0.883 - - - - - - 0.883 - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
42. phactr2 ENSDARG00000027172 306 0.882 - 0.882 - - - - - - - phosphatase and actin regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040724-11]
43. ptprb ENSDARG00000076624 323 0.879 0.879 - - - - - - - - protein tyrosine phosphatase, receptor type, b [Source:ZFIN;Acc:ZDB-GENE-101108-3]
44. dhx34 ENSDARG00000061168 349 0.879 - 0.879 - - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:ZFIN;Acc:ZDB-GENE-061207-30]
45. b3galt2 ENSDARG00000102061, ENSDARG00000114032 216 0.878 - - - - - - 0.878 - - UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2078]
46. dhrs7 ENSDARG00000003444 812 0.875 - - - - - - 0.875 - - dehydrogenase/reductase (SDR family) member 7 [Source:ZFIN;Acc:ZDB-GENE-060825-21]
47. ABTB1 ENSDARG00000063354 383 0.873 - 0.873 - - - - - - - ankyrin repeat and BTB (POZ) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-141212-241]
48. si:dkey-111b14.2 si:dkey-111b14.2 25 0.873 0.873 - - - - - - - -
49. traf3 ENSDARG00000022000 156 0.87 - 0.870 - - - - - - - TNF receptor-associated factor 3 [Source:ZFIN;Acc:ZDB-GENE-040801-257]
50. CABZ01027552.1 CABZ01027552.1 760 0.867 - - - - - - 0.867 - -
51. fam212aa 1132 0.865 - 0.865 - - - - - - - family with sequence similarity 212, member Aa, transcript variant X1
52. si:dkey-10p5.10 ENSDARG00000099307 371 0.863 - 0.863 - - - - - - - si:dkey-10p5.10 [Source:ZFIN;Acc:ZDB-GENE-120215-130]
53. HIP1R_1 HIP1R_1 129 0.863 - - - - - - 0.863 - -
54. CABZ01086825.1 CABZ01086825.1 573 0.862 - 0.862 - - - - - - -
55. sirt5 ENSDARG00000039684 472 0.862 - - - - - - 0.862 - - sirtuin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-349]
56. prpf18 ENSDARG00000058306, ENSDARG00000113879 512 0.861 - - - - - - 0.861 - - PRP18 pre-mRNA processing factor 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040704-45]
57. nphp3 ENSDARG00000078261 110 0.86 - 0.860 - - - - - - - nephronophthisis 3 [Source:ZFIN;Acc:ZDB-GENE-091204-117]
58. ubald1b ENSDARG00000020976 1162 0.86 - - - - - - - 0.860 - UBA-like domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-446]
59. zgc:171497 ENSDARG00000100614 1040 0.86 - - - - - - - 0.860 - zgc:171497 [Source:ZFIN;Acc:ZDB-GENE-080220-58]
60. ric8a ENSDARG00000007247 229 0.859 - - - - - - - 0.859 - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
61. CABZ01071911.1 CABZ01071911.1 385 0.859 - - - - - - 0.859 - -
62. C5H9orf117 C5H9orf117 88 0.859 - - - - - 0.859 - - -
63. otud3 ENSDARG00000022648 263 0.858 - - - - - - - 0.858 - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
64. PTP4A2 PTP4A2 185 0.858 - - - - - - - 0.858 -
65. myo18ab ENSDARG00000061862 124 0.857 - 0.857 - - - - - - - myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
66. pdcd2 ENSDARG00000007892 223 0.856 - - - - - - - 0.856 - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
67. sort1a ENSDARG00000029402, ENSDARG00000117178 1480 0.855 - 0.855 - - - - - - - sortilin 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2329]
68. exosc9 ENSDARG00000006392 906 0.854 - - - - - - 0.854 - - exosome component 9 [Source:ZFIN;Acc:ZDB-GENE-041010-180]
69. ogfod1 ENSDARG00000036061 417 0.853 - - - - - - 0.853 - - 2-oxoglutarate and iron-dependent oxygenase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3294]
70. sema3fa ENSDARG00000011163 759 0.853 - - - - - - 0.853 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
71. pptc7a ENSDARG00000011122 739 0.853 - - - - - - 0.853 - - PTC7 protein phosphatase homolog a [Source:ZFIN;Acc:ZDB-GENE-041114-74]
72. pdrg1 ENSDARG00000045017 628 0.851 - - - - - - - 0.851 - p53 and DNA-damage regulated 1 [Source:ZFIN;Acc:ZDB-GENE-050417-276]
73. zgc:109949 ENSDARG00000103413 426 0.851 - - - - - - - 0.851 - zgc:109949 [Source:ZFIN;Acc:ZDB-GENE-050522-166]
74. AP3B2 1874 0.851 - 0.851 - - - - - - - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
75. ppp1r3da ENSDARG00000077513 109 0.85 - - - - - - - 0.850 - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
76. LMLN ENSDARG00000061265 1618 0.85 - - - - - - - 0.850 - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
77. NMNAT3 ENSDARG00000077034 126 0.849 - - - - - 0.849 - - - nicotinamide nucleotide adenylyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:20989]
78. BX005085.1 ENSDARG00000089947 230 0.849 - - - - - - - 0.849 -
79. fam175b fam175b 37 0.849 0.849 - - - - - - - -
80. mfng ENSDARG00000042925 104 0.849 - 0.849 - - - - - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-041130-1]
81. C3H16orf89 C3H16orf89 449 0.848 - - - - - - - 0.848 -
82. ggt5a ENSDARG00000052045 293 0.847 - 0.847 - - - - - - - gamma-glutamyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-080226-1]
83. tmem79a ENSDARG00000071250 48 0.846 - - - - - - 0.846 - - transmembrane protein 79a [Source:ZFIN;Acc:ZDB-GENE-060503-538]
84. CABZ01085858.1 CABZ01085858.1 355 0.843 - 0.843 - - - - - - -
85. RGS9BP ENSDARG00000086756 65 0.843 - - - - - - - 0.843 - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
86. hoxb5b ENSDARG00000054030, ENSDARG00000113174 808 0.843 0.843 - - - - - - - - homeobox B5b [Source:ZFIN;Acc:ZDB-GENE-000823-6]
87. MAP3K6 MAP3K6 181 0.842 - - - - - - 0.842 - -
88. TPGS1 TPGS1 228 0.841 - - - - - 0.841 - - -
89. pdp1 ENSDARG00000076308 455 0.841 0.841 - - - - - - - - pyruvate dehyrogenase phosphatase catalytic subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060810-70]
90. tmem68 ENSDARG00000086737 209 0.841 - - - - - - - 0.841 - transmembrane protein 68 [Source:ZFIN;Acc:ZDB-GENE-040426-1267]
91. PLLP ENSDARG00000062756, ENSDARG00000109949 114 0.84 - - - - - - 0.840 - - plasmolipin [Source:ZFIN;Acc:ZDB-GENE-050419-195]
92. tspan11 ENSDARG00000001781 743 0.84 - - - - - - - 0.840 - tetraspanin 11 [Source:ZFIN;Acc:ZDB-GENE-041210-93]
93. cldn5b ENSDARG00000014059 654 0.84 - 0.840 - - - - - - - claudin 5b [Source:ZFIN;Acc:ZDB-GENE-041010-140]
94. TMEM208 ENSDARG00000068291 643 0.839 - - - - - - - 0.839 - transmembrane protein 208 [Source:HGNC Symbol;Acc:HGNC:25015]
95. actn2 actn2 1054 0.839 - 0.839 - - - - - - -
96. slc25a21 ENSDARG00000060564 344 0.838 - - - - - - - 0.838 - solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 [Source:ZFIN;Acc:ZDB-GENE-060929-664]
97. ZDHHC20_1 ZDHHC20_1 440 0.837 - - - - - - - 0.837 -
98. RFESD_1 RFESD_1 65 0.836 - - - - - - - 0.836 -
99. PPP2R2B PPP2R2B 257 0.836 - - - - - - - 0.836 -
100. si:dkey-52l6.2 si:dkey-52l6.2 384 0.836 - - - - - - - 0.836 -

There are 940 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA