Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for acadm

Gene Name Gene ID Reads Annotation
acadm ENSDARG00000038900 2319 acyl-CoA dehydrogenase medium chain [Source:ZFIN;Acc:ZDB-GENE-040426-1945]










Genes with expression patterns similar to acadm

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. acadm ENSDARG00000038900 2319 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 acyl-CoA dehydrogenase medium chain [Source:ZFIN;Acc:ZDB-GENE-040426-1945]
2. kctd6a ENSDARG00000043095 480 2.337 0.700 0.869 - - - - - 0.768 - potassium channel tetramerization domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-050208-474]
3. ndufs6 ENSDARG00000056583 7220 2.256 - 0.718 - - - 0.804 0.734 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:ZFIN;Acc:ZDB-GENE-040912-86]
4. PPP1R8 PPP1R8 1897 2.232 - 0.742 - - - - 0.748 0.742 -
5. ndufab1a ENSDARG00000058463, ENSDARG00000112762 11317 1.678 - - - - - 0.921 0.757 - - NADH:ubiquinone oxidoreductase subunit AB1a [Source:ZFIN;Acc:ZDB-GENE-040801-1]
6. arhgap42a ENSDARG00000056619, ENSDARG00000116136 865 1.667 - 0.907 - - - - - 0.760 - Rho GTPase activating protein 42a [Source:ZFIN;Acc:ZDB-GENE-030131-8077]
7. tcp11l2 ENSDARG00000027316 1906 1.61 - 0.907 - - - - 0.703 - - t-complex 11, testis-specific-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1956]
8. magoh ENSDARG00000038635, ENSDARG00000109837 2880 1.602 0.808 0.794 - - - - - - - mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
9. tfap4 ENSDARG00000103923 2203 1.601 - 0.836 - - - - 0.765 - - transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
10. TNRC6B ENSDARG00000074161 2464 1.597 - 0.836 - - - - 0.761 - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
11. gpatch8 ENSDARG00000059768 2743 1.594 - 0.853 - - - - 0.741 - - G patch domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-6966]
12. lrpprc ENSDARG00000043970 3847 1.591 - - - - - 0.768 - 0.823 - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
13. gmppaa ENSDARG00000024112 925 1.589 - 0.857 - - - - 0.732 - - GDP-mannose pyrophosphorylase Aa [Source:ZFIN;Acc:ZDB-GENE-040704-37]
14. sdcbp2 ENSDARG00000012513, ENSDARG00000113289, ENSDARG00000115159 6359 1.588 - - - - - 0.762 0.826 - - syndecan binding protein (syntenin) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3727]
15. MYO1D ENSDARG00000036863 768 1.588 - 0.812 - - - - - 0.776 - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
16. grsf1 ENSDARG00000053021 2752 1.574 - - - - - 0.775 0.799 - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
17. hibadhb ENSDARG00000007959 4858 1.572 - - - - - 0.795 0.777 - - 3-hydroxyisobutyrate dehydrogenase b [Source:ZFIN;Acc:ZDB-GENE-040426-1582]
18. cyc1 ENSDARG00000038075 16699 1.568 - - - - - 0.864 0.704 - - cytochrome c-1 [Source:ZFIN;Acc:ZDB-GENE-031105-2]
19. xrcc5_1 ENSDARG00000099298 1533 1.568 - 0.849 - - - - - 0.719 - X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:ZFIN;Acc:ZDB-GENE-041008-108]
20. mical3a ENSDARG00000021979, ENSDARG00000097017 1790 1.568 - - - - - - 0.773 0.795 - microtubule associated monooxygenase, calponin and LIM domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-050126-2]
21. slc25a11 ENSDARG00000035741 3377 1.567 - - - - - 0.737 0.830 - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
22. pum1 ENSDARG00000099256 5017 1.558 - 0.775 - - - - 0.783 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
23. pcsk5b ENSDARG00000060518 883 1.553 - 0.791 - - - - - 0.762 - proprotein convertase subtilisin/kexin type 5b [Source:ZFIN;Acc:ZDB-GENE-070822-7]
24. adcy7 ENSDARG00000060070 1878 1.552 - 0.752 - - - - 0.800 - - adenylate cyclase 7 [Source:ZFIN;Acc:ZDB-GENE-040713-1]
25. gna11b ENSDARG00000053326 5118 1.552 - 0.758 - - - - 0.794 - - guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
26. gars ENSDARG00000059070 17015 1.546 - - - - - 0.816 0.730 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
27. ehd3 ENSDARG00000007869 3238 1.545 - - - - - 0.797 0.748 - - EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
28. ptpn2b ENSDARG00000035986 909 1.537 - 0.744 - - - - 0.793 - - protein tyrosine phosphatase, non-receptor type 2, b [Source:ZFIN;Acc:ZDB-GENE-030909-8]
29. ndufa4 ENSDARG00000056108, ENSDARG00000116304 2355 1.529 - - - - - 0.735 0.794 - - NADH:ubiquinone oxidoreductase subunit A4 [Source:ZFIN;Acc:ZDB-GENE-040426-1962]
30. cbfb ENSDARG00000040917 1422 1.529 - 0.820 - - - - - 0.709 - core-binding factor, beta subunit [Source:ZFIN;Acc:ZDB-GENE-980526-440]
31. smfn ENSDARG00000009806 1280 1.526 - - - - - - 0.754 0.772 - small fragment nuclease [Source:ZFIN;Acc:ZDB-GENE-040426-1709]
32. Sep-02 Sep-02 10074 1.526 - - - - - 0.751 0.775 - -
33. prdx4 ENSDARG00000069013 1150 1.525 - 0.724 - - - 0.801 - - - peroxiredoxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1096]
34. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.525 - 0.799 - - - - 0.726 - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
35. eif3ha ENSDARG00000102452 9238 1.524 - - - - - 0.769 0.755 - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
36. PPFIBP1_2 PPFIBP1_2 1274 1.52 - 0.784 - - - 0.736 - - -
37. CABZ01066772.1 CABZ01066772.1 299 1.518 - - - - - - 0.752 0.766 -
38. rfx2 ENSDARG00000013575 1275 1.515 - 0.772 - - - - - 0.743 - regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
39. zgc:112982 ENSDARG00000001829, ENSDARG00000110590, ENSDARG00000111057 2330 1.514 - 0.802 - - - - 0.712 - - zgc:112982 [Source:ZFIN;Acc:ZDB-GENE-050306-55]
40. trpm7 ENSDARG00000036232 925 1.514 - 0.793 - - - - 0.721 - - transient receptor potential cation channel, subfamily M, member 7 [Source:ZFIN;Acc:ZDB-GENE-021115-2]
41. por por 1211 1.514 - - - - - 0.813 0.701 - -
42. ech1 ENSDARG00000012915, ENSDARG00000109720 1409 1.511 - 0.732 - - - 0.779 - - - enoyl CoA hydratase 1, peroxisomal [Source:ZFIN;Acc:ZDB-GENE-041010-170]
43. uso1 ENSDARG00000019581 479 1.511 - 0.731 - - - - - 0.780 - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
44. dcps ENSDARG00000009862 571 1.508 - 0.766 - - - - 0.742 - - decapping enzyme, scavenger [Source:ZFIN;Acc:ZDB-GENE-040311-1]
45. slco5a1 slco5a1 383 1.508 - - - - - - - 0.787 0.721
46. CACFD1 ENSDARG00000090818 1298 1.506 - 0.752 - - - - - 0.754 - calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]
47. fam135a ENSDARG00000059843 2352 1.504 - 0.761 - - - - 0.743 - - family with sequence similarity 135, member A [Source:ZFIN;Acc:ZDB-GENE-080130-1]
48. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.502 - - - - - 0.743 - 0.759 - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
49. rac1 rac1 7341 1.502 - - - - - 0.748 0.754 - -
50. MRPL52 ENSDARG00000090568 4402 1.501 - - - - - - 0.767 0.734 - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
51. zgc:193541 ENSDARG00000092873 21276 1.501 - - - - - 0.775 0.726 - - zgc:193541 [Source:ZFIN;Acc:ZDB-GENE-081022-15]
52. ATP13A3 ENSDARG00000076622 1000 1.498 - 0.782 - - - - - 0.716 - ATPase 13A3 [Source:ZFIN;Acc:ZDB-GENE-120521-1]
53. saal1 ENSDARG00000018681, ENSDARG00000109471 480 1.496 - - - - - - 0.722 0.774 - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
54. hmga2 ENSDARG00000069912 20402 1.496 - - - - - 0.752 0.744 - - high mobility group AT-hook 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3148]
55. nop16 ENSDARG00000044402 3645 1.493 - - - - - - 0.732 0.761 - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
56. zgc:55733 ENSDARG00000103845 1550 1.493 - - - - - - 0.735 0.758 - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
57. nnt ENSDARG00000023536 7357 1.492 - - - - - 0.734 0.758 - - nicotinamide nucleotide transhydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2592]
58. plcd3a ENSDARG00000052957 467 1.489 - - - - - 0.724 0.765 - - phospholipase C, delta 3a [Source:ZFIN;Acc:ZDB-GENE-070620-1]
59. vhl ENSDARG00000070617 663 1.482 - 0.724 - - - - - 0.758 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
60. znf395_1 znf395_1 342 1.481 0.703 0.778 - - - - - - -
61. prkacaa ENSDARG00000100349 2711 1.48 0.745 - - - - - 0.735 - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-050114-6]
62. adh5 ENSDARG00000080010, ENSDARG00000111574 4980 1.475 - - - - - 0.719 0.756 - - alcohol dehydrogenase 5 [Source:ZFIN;Acc:ZDB-GENE-011003-1]
63. esd ENSDARG00000019496 3192 1.474 - - - - - 0.742 0.732 - - esterase D/formylglutathione hydrolase [Source:ZFIN;Acc:ZDB-GENE-050417-328]
64. ATP5J_2 ATP5J_2 2381 1.469 - - - - - 0.737 0.732 - -
65. mrpl54 ENSDARG00000071468 2715 1.465 - - - - - - 0.706 0.759 - mitochondrial ribosomal protein L54 [Source:ZFIN;Acc:ZDB-GENE-050208-381]
66. fam219aa ENSDARG00000016396 1788 1.457 - 0.713 - - - - - 0.744 - family with sequence similarity 219, member Aa [Source:ZFIN;Acc:ZDB-GENE-040801-110]
67. mta3 ENSDARG00000054903, ENSDARG00000113436 353 1.449 - 0.725 - - - - 0.724 - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
68. hspa4b ENSDARG00000018989, ENSDARG00000112727, ENSDARG00000116230 7043 1.447 - - - - - 0.722 0.725 - - heat shock protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6018]
69. ephb4a ENSDARG00000100725 1749 1.443 - 0.733 - - - - 0.710 - - eph receptor B4a [Source:ZFIN;Acc:ZDB-GENE-990415-62]
70. si:ch211-214e3.5 ENSDARG00000074270 755 1.437 - 0.719 - - - - 0.718 - - si:ch211-214e3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-19]
71. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.434 - - - - - 0.711 0.723 - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
72. plcg1 ENSDARG00000038442 5324 1.43 - - - - - - 0.706 0.724 - phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
73. pptc7b ENSDARG00000052658 1756 1.423 - - - - - 0.707 - 0.716 - PTC7 protein phosphatase homolog b [Source:ZFIN;Acc:ZDB-GENE-081105-111]
74. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.418 - 0.703 - - - - - 0.715 - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
75. sh3glb2a ENSDARG00000008983 452 1.414 - - - - - - 0.706 0.708 - SH3-domain GRB2-like endophilin B2a [Source:ZFIN;Acc:ZDB-GENE-061201-8]
76. uqcrc2a ENSDARG00000014794 3949 1.411 - - - - - - 0.708 0.703 - ubiquinol-cytochrome c reductase core protein 2a [Source:ZFIN;Acc:ZDB-GENE-040718-405]
77. zfand1 ENSDARG00000009178, ENSDARG00000114617 1192 0.918 - 0.918 - - - - - - - zinc finger, AN1-type domain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-269]
78. vkorc1 ENSDARG00000086183 1212 0.898 - 0.898 - - - - - - - vitamin K epoxide reductase complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2286]
79. itga5 ENSDARG00000006353 1876 0.898 - 0.898 - - - - - - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
80. mapk6 ENSDARG00000032103 6422 0.894 - 0.894 - - - - - - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
81. trappc6b ENSDARG00000016463 1343 0.89 - 0.890 - - - - - - - trafficking protein particle complex 6b [Source:ZFIN;Acc:ZDB-GENE-041010-122]
82. ube2l3a ENSDARG00000110975, ENSDARG00000112087 2899 0.89 - 0.890 - - - - - - - ubiquitin-conjugating enzyme E2L 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2977]
83. ftsjd2 ftsjd2 2694 0.884 - - - - - - 0.884 - -
84. tmem167b_1 ENSDARG00000059400 1453 0.882 - 0.882 - - - - - - - transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
85. ugt1b4 ENSDARG00000097024 1848 0.878 - 0.878 - - - - - - - UDP glucuronosyltransferase 1 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-080227-13]
86. cops4 ENSDARG00000043732 1508 0.876 - 0.876 - - - - - - - COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis) [Source:ZFIN;Acc:ZDB-GENE-030131-4317]
87. EMG1 ENSDARG00000056914 1343 0.87 - - - - - - 0.870 - - EMG1 N1-specific pseudouridine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060421-2909]
88. NCBP1 585 0.868 - 0.868 - - - - - - - nuclear cap binding protein subunit 1
89. acsl1 acsl1 4216 0.868 - - - - - 0.868 - - -
90. cmtm7 ENSDARG00000010032 875 0.864 - 0.864 - - - - - - - CKLF-like MARVEL transmembrane domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-041111-174]
91. hoga1 ENSDARG00000018944 800 0.863 - 0.863 - - - - - - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2242]
92. elmod2 ENSDARG00000101669 3101 0.86 - 0.860 - - - - - - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
93. tmem141 ENSDARG00000101963 513 0.859 - 0.859 - - - - - - - transmembrane protein 141 [Source:ZFIN;Acc:ZDB-GENE-060929-272]
94. usp10 ENSDARG00000103422 4247 0.858 - 0.858 - - - - - - - ubiquitin specific peptidase 10 [Source:ZFIN;Acc:ZDB-GENE-030219-132]
95. map9 ENSDARG00000037276, ENSDARG00000115648 581 0.858 - 0.858 - - - - - - - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
96. ccnt2b ENSDARG00000036510 3353 0.858 - - - - - - 0.858 - - cyclin T2b [Source:ZFIN;Acc:ZDB-GENE-030131-183]
97. fam53b ENSDARG00000016156 2143 0.857 - 0.857 - - - - - - - family with sequence similarity 53, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2495]
98. MDFIC ENSDARG00000074223 781 0.854 - 0.854 - - - - - - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
99. tnpo2 ENSDARG00000038239 2469 0.852 - 0.852 - - - - - - - transportin 2 (importin 3, karyopherin beta 2b) [Source:ZFIN;Acc:ZDB-GENE-040822-16]
100. mark2a ENSDARG00000079905 1765 0.851 - 0.851 - - - - - - - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]

There are 1285 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA