Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for abt1

Gene Name Gene ID Reads Annotation
abt1 ENSDARG00000043666 345 activator of basal transcription 1 [Source:ZFIN;Acc:ZDB-GENE-050522-127]










Genes with expression patterns similar to abt1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. abt1 ENSDARG00000043666 345 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 activator of basal transcription 1 [Source:ZFIN;Acc:ZDB-GENE-050522-127]
2. GLTPD2 ENSDARG00000067889, ENSDARG00000114510 320 1.689 - 0.853 - - - 0.836 - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
3. lsg1 ENSDARG00000015352 812 1.681 - 0.906 - - - - 0.775 - - large 60S subunit nuclear export GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2184]
4. ck2a2a ck2a2a 1695 1.664 - 0.881 - - - 0.783 - - -
5. rnf34a ENSDARG00000038300 179 1.66 - 0.880 - - - 0.780 - - - ring finger protein 34a [Source:ZFIN;Acc:ZDB-GENE-030131-6135]
6. KCNU1 KCNU1 246 1.65 - 0.881 - - - - 0.769 - -
7. CABZ01066717.1 CABZ01066717.1 351 1.643 - 0.875 - - - 0.768 - - -
8. f7 ENSDARG00000034862 405 1.642 - 0.867 - - - 0.775 - - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
9. six2a ENSDARG00000058004, ENSDARG00000115214 414 1.639 - 0.862 - - - 0.777 - - - SIX homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-010412-1]
10. si:ch211-215d8.2 ENSDARG00000093233 784 1.634 - 0.853 - - - 0.781 - - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
11. kcnk13a ENSDARG00000008212 136 1.63 - 0.882 - - - 0.748 - - - potassium channel, subfamily K, member 13a [Source:ZFIN;Acc:ZDB-GENE-080219-46]
12. ptbp2a ENSDARG00000101947 1921 1.625 - 0.828 - - - - 0.797 - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
13. dcun1d2 dcun1d2 1721 1.601 - 0.790 - - - 0.811 - - -
14. slc48a1b ENSDARG00000026109 1427 1.589 - 0.778 - - - 0.811 - - - solute carrier family 48 (heme transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8226]
15. rgs19 ENSDARG00000077385 783 1.576 - 0.850 - - - 0.726 - - - regulator of G protein signaling 19 [Source:ZFIN;Acc:ZDB-GENE-080723-72]
16. zgc:64002_1 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 257 1.575 - 0.866 - - - 0.709 - - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
17. ms4a17a.9 ENSDARG00000094854 933 1.553 - 0.828 - - - 0.725 - - - membrane-spanning 4-domains, subfamily A, member 17A.9 [Source:ZFIN;Acc:ZDB-GENE-050320-79]
18. znf622 ENSDARG00000014692 921 1.52 - 0.726 - - - 0.794 - - - zinc finger protein 622 [Source:ZFIN;Acc:ZDB-GENE-050927-1]
19. prelid1a ENSDARG00000098671 4745 1.514 - 0.791 - - - 0.723 - - - PRELI domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1341]
20. UTP20 ENSDARG00000099280 1672 1.5 - 0.737 - - - 0.763 - - - UTP20 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-080225-38]
21. rhbg ENSDARG00000009018 1131 1.498 - 0.719 - - - 0.779 - - - Rh family, B glycoprotein (gene/pseudogene) [Source:ZFIN;Acc:ZDB-GENE-030131-9542]
22. cmc1 ENSDARG00000103670 1197 1.464 - 0.722 - - - 0.742 - - - C-x(9)-C motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2626]
23. bmper ENSDARG00000101980 668 1.452 - 0.735 - - - 0.717 - - - BMP binding endothelial regulator [Source:ZFIN;Acc:ZDB-GENE-030219-146]
24. ubr3 ENSDARG00000042508 738 1.449 0.707 - - - - 0.742 - - - ubiquitin protein ligase E3 component n-recognin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1473]
25. dohh ENSDARG00000003564, ENSDARG00000116423 1117 1.432 - 0.709 - - - - 0.723 - - deoxyhypusine hydroxylase/monooxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-451]
26. nfu1 ENSDARG00000068125 1743 0.957 - 0.957 - - - - - - - NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
27. coil ENSDARG00000040070 863 0.949 - 0.949 - - - - - - - coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
28. csgalnact2 ENSDARG00000061400 741 0.931 - 0.931 - - - - - - - chondroitin sulfate N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5186]
29. PRIM2 ENSDARG00000052721 825 0.93 - 0.930 - - - - - - - DNA primase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-471]
30. BX005256.1 ENSDARG00000106112 467 0.927 - 0.927 - - - - - - - phospholipase A2 inhibitor CNF-like [Source:NCBI gene;Acc:110438015]
31. cacng6a ENSDARG00000036457 344 0.92 - 0.920 - - - - - - - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
32. nme4 ENSDARG00000088390 87 0.916 - - - - - 0.916 - - - NME/NM23 nucleoside diphosphate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1043]
33. cflara ENSDARG00000055966 464 0.916 - 0.916 - - - - - - - CASP8 and FADD-like apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-030826-3]
34. RBMS1 RBMS1 258 0.914 - 0.914 - - - - - - -
35. alg9 ENSDARG00000012840 631 0.911 - 0.911 - - - - - - - ALG9, alpha-1,2-mannosyltransferase [Source:ZFIN;Acc:ZDB-GENE-040426-1270]
36. foxn4 ENSDARG00000010591 2332 0.91 - 0.910 - - - - - - - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
37. sowahcb ENSDARG00000059582 178 0.91 - 0.910 - - - - - - - sosondowah ankyrin repeat domain family Cb [Source:ZFIN;Acc:ZDB-GENE-061215-96]
38. tradd ENSDARG00000036057, ENSDARG00000117083 1583 0.909 - - - - - 0.909 - - - tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
39. nubp2 ENSDARG00000055653 803 0.908 - 0.908 - - - - - - - nucleotide binding protein 2 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-051023-10]
40. NUDT8 ENSDARG00000007722 329 0.907 - 0.907 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
41. lamp1 1017 0.906 - 0.906 - - - - - - - lysosomal-associated membrane protein 1
42. gemin4 ENSDARG00000041252, ENSDARG00000115829 226 0.905 - 0.905 - - - - - - - gem (nuclear organelle) associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-050522-188]
43. C13H10orf32 C13H10orf32 465 0.904 - 0.904 - - - - - - -
44. slc25a11 ENSDARG00000035741 3377 0.904 - 0.904 - - - - - - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
45. rab33ba ENSDARG00000052290 914 0.903 - 0.903 - - - - - - - RAB33B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-122]
46. birc5a ENSDARG00000075621 2256 0.903 - 0.903 - - - - - - - baculoviral IAP repeat containing 5a [Source:ZFIN;Acc:ZDB-GENE-030826-1]
47. nxnl2 ENSDARG00000003934 386 0.903 - - - - - 0.903 - - - nucleoredoxin like 2 [Source:ZFIN;Acc:ZDB-GENE-041212-55]
48. rab40c ENSDARG00000061208 1072 0.902 - 0.902 - - - - - - - RAB40c, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030515-1]
49. RNF130 ENSDARG00000089767 559 0.902 - 0.902 - - - - - - - ring finger protein 130 [Source:ZFIN;Acc:ZDB-GENE-050522-525]
50. fancd2 ENSDARG00000053574 247 0.901 - 0.901 - - - - - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
51. cox11 ENSDARG00000061004, ENSDARG00000115002 423 0.901 - 0.901 - - - - - - - cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]
52. UBASH3B UBASH3B 292 0.897 - 0.897 - - - - - - -
53. fbxo42 ENSDARG00000087545 262 0.897 - 0.897 - - - - - - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
54. F7 ENSDARG00000034862 121 0.895 - - - - - 0.895 - - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
55. lonp1 ENSDARG00000102765 507 0.894 - 0.894 - - - - - - - lon peptidase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-4006]
56. tbcelb ENSDARG00000019525 299 0.894 - 0.894 - - - - - - - tubulin folding cofactor E-like b [Source:ZFIN;Acc:ZDB-GENE-100921-13]
57. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 0.894 - 0.894 - - - - - - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
58. slc4a1ap ENSDARG00000034160 749 0.894 - 0.894 - - - - - - - solute carrier family 4 (anion exchanger), member 1, adaptor protein [Source:ZFIN;Acc:ZDB-GENE-080521-2]
59. fam57ba ENSDARG00000026875 504 0.894 - 0.894 - - - - - - - family with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
60. wdr18 ENSDARG00000041113 810 0.893 - 0.893 - - - - - - - WD repeat domain 18 [Source:ZFIN;Acc:ZDB-GENE-040905-4]
61. BX005085.1 ENSDARG00000089947 230 0.893 - 0.893 - - - - - - -
62. pgap2 ENSDARG00000044596 60 0.892 - 0.892 - - - - - - - post-GPI attachment to proteins 2 [Source:ZFIN;Acc:ZDB-GENE-050320-119]
63. ets2 ENSDARG00000103980 451 0.891 - - - - - 0.891 - - - v-ets avian erythroblastosis virus E26 oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-050522-552]
64. uevld ENSDARG00000009266, ENSDARG00000116754 377 0.891 - 0.891 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:ZFIN;Acc:ZDB-GENE-040801-138]
65. CR388047.3 ENSDARG00000117023 89 0.89 - 0.890 - - - - - - -
66. stra6 ENSDARG00000051874, ENSDARG00000115031 1625 0.89 - 0.890 - - - - - - - stimulated by retinoic acid 6 [Source:ZFIN;Acc:ZDB-GENE-060616-252]
67. prkar1ab ENSDARG00000101755 555 0.89 - 0.890 - - - - - - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b [Source:ZFIN;Acc:ZDB-GENE-050417-238]
68. cox7a1 ENSDARG00000069464, ENSDARG00000112682 243 0.89 - 0.890 - - - - - - - cytochrome c oxidase subunit 7A1 [Source:ZFIN;Acc:ZDB-GENE-060929-340]
69. BX000999.4_1 BX000999.4_1 222 0.889 - 0.889 - - - - - - -
70. si:dkey-242h9.3 ENSDARG00000069189 83 0.889 - - - - - 0.889 - - - si:dkey-242h9.3 [Source:ZFIN;Acc:ZDB-GENE-060503-347]
71. gltpd1 gltpd1 377 0.889 - 0.889 - - - - - - -
72. gpam ENSDARG00000074169 488 0.888 - 0.888 - - - - - - - glycerol-3-phosphate acyltransferase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-101026-1]
73. tex261 ENSDARG00000044584 513 0.888 - 0.888 - - - - - - - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
74. si:dkey-118k5.3 ENSDARG00000087736 155 0.887 - - - - - 0.887 - - - si:dkey-118k5.3 [Source:ZFIN;Acc:ZDB-GENE-121214-294]
75. pc pc 116 0.887 - 0.887 - - - - - - -
76. ACOT12 ENSDARG00000054534 61 0.886 - - - - - 0.886 - - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
77. si:ch211-105d18.6 si:ch211-105d18.6 59 0.886 - 0.886 - - - - - - -
78. neil3 ENSDARG00000020079, ENSDARG00000111296 397 0.886 - 0.886 - - - - - - - nei-like DNA glycosylase 3 [Source:ZFIN;Acc:ZDB-GENE-041114-18]
79. CT573322.1 CT573322.1 38 0.886 - 0.886 - - - - - - -
80. CABZ01114089.1 CABZ01114089.1 127 0.886 - 0.886 - - - - - - -
81. SETDB2 ENSDARG00000101462 249 0.885 - - - - - 0.885 - - - SET domain, bifurcated 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7093]
82. commd3 ENSDARG00000045402 1601 0.885 - 0.885 - - - - - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
83. zgc:109744 ENSDARG00000070800 262 0.885 - 0.885 - - - - - - - zgc:109744 [Source:ZFIN;Acc:ZDB-GENE-050809-146]
84. TEAD1 TEAD1 43 0.884 - 0.884 - - - - - - -
85. ckap5 ENSDARG00000102674 5068 0.884 - 0.884 - - - - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
86. gfi1ab ENSDARG00000044457, ENSDARG00000114140 125 0.884 - 0.884 - - - - - - - growth factor independent 1A transcription repressor b [Source:ZFIN;Acc:ZDB-GENE-040116-8]
87. cyp2aa1 ENSDARG00000099003 297 0.884 - 0.884 - - - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-070424-33]
88. si:dkey-162h11.2 si:dkey-162h11.2 257 0.882 - - - - - 0.882 - - -
89. TSG101 TSG101 1686 0.882 - - - - - 0.882 - - -
90. si:dkey-154p10.3 ENSDARG00000068366 153 0.882 - 0.882 - - - - - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
91. dirc2 ENSDARG00000009783 484 0.881 - 0.881 - - - - - - - disrupted in renal carcinoma 2 [Source:ZFIN;Acc:ZDB-GENE-040912-167]
92. CR376783.1 ENSDARG00000074235 259 0.881 - 0.881 - - - - - - - V-set domain-containing T-cell activation inhibitor 1-like [Source:NCBI gene;Acc:797620]
93. smdt1 smdt1 99 0.881 - 0.881 - - - - - - -
94. sh3pxd2aa ENSDARG00000060148 913 0.88 - 0.880 - - - - - - - SH3 and PX domains 2Aa [Source:ZFIN;Acc:ZDB-GENE-060503-271]
95. ppapdc2 ppapdc2 67 0.88 - 0.880 - - - - - - -
96. MAP3K2 ENSDARG00000062884 34 0.879 - 0.879 - - - - - - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
97. stk11 ENSDARG00000046074 506 0.879 - 0.879 - - - - - - - serine/threonine kinase 11 [Source:ZFIN;Acc:ZDB-GENE-050417-383]
98. si:dkey-228i19.34 si:dkey-228i19.34 43 0.878 - 0.878 - - - - - - -
99. U3_5 U3_5 67 0.878 - 0.878 - - - - - - -
100. si:ch1073-155h21.1 ENSDARG00000007582 137 0.878 - 0.878 - - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]

There are 784 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA