Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ablim1b

Gene Name Gene ID Reads Annotation
ablim1b ENSDARG00000045064, ENSDARG00000111454, ENSDARG00000112629 2672 actin binding LIM protein 1b [Source:ZFIN;Acc:ZDB-GENE-050327-91]










Genes with expression patterns similar to ablim1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ablim1b ENSDARG00000045064, ENSDARG00000111454, ENSDARG00000112629 2672 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 actin binding LIM protein 1b [Source:ZFIN;Acc:ZDB-GENE-050327-91]
2. rac1 rac1 7341 2.303 - 0.818 - - - 0.738 0.747 - -
3. eif3ja ENSDARG00000012603 6324 1.757 - - 0.944 - - - 0.813 - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
4. vrk1 ENSDARG00000018006 1759 1.733 - 0.794 0.939 - - - - - - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
5. CABZ01076275.1 ENSDARG00000100753 5137 1.733 - - 0.956 - - - 0.777 - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
6. lbr ENSDARG00000014013 4835 1.719 - 0.820 0.899 - - - - - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
7. mcts1 ENSDARG00000025972 4662 1.718 - - 0.942 - - - 0.776 - - malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
8. gspt1l ENSDARG00000098627 8381 1.718 - - 0.954 - - - 0.764 - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
9. ywhae2 ENSDARG00000017014 5105 1.718 - - 0.905 - - - 0.813 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050306-44]
10. sash1a ENSDARG00000007179 2497 1.709 - - 0.958 - - - 0.751 - - SAM and SH3 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9960]
11. gdi1 ENSDARG00000056122 4106 1.704 - 0.741 0.963 - - - - - - GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
12. anapc13 ENSDARG00000078435 996 1.704 - 0.753 0.951 - - - - - - anaphase promoting complex subunit 13 [Source:ZFIN;Acc:ZDB-GENE-091204-298]
13. strn3 ENSDARG00000001729 4608 1.697 - - 0.954 - - - - 0.743 - striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]
14. TMEM261 TMEM261 6529 1.692 - - 0.975 - - - 0.717 - -
15. tmem45b ENSDARG00000056239 2395 1.684 - - 0.946 0.738 - - - - - transmembrane protein 45B [Source:ZFIN;Acc:ZDB-GENE-040426-1904]
16. klhl15 ENSDARG00000001930 793 1.68 - - 0.973 - - - 0.707 - - kelch-like family member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-99]
17. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 1.677 - 0.756 0.921 - - - - - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
18. selt1b 1396 1.672 - - 0.967 - - 0.705 - - - selenoprotein T, 1b
19. fam50a ENSDARG00000024895 3020 1.666 - 0.709 0.957 - - - - - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
20. psmb7 ENSDARG00000037962 11542 1.654 - - 0.854 - - - 0.800 - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
21. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.652 - - 0.947 - - - 0.705 - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
22. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 1.651 - - 0.899 - - - 0.752 - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
23. cmip ENSDARG00000062933 4521 1.65 - 0.711 0.939 - - - - - - c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
24. yy1a ENSDARG00000042796 4982 1.64 - - 0.924 - - - 0.716 - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
25. sly1 sly1 2403 1.633 - 0.839 - - - - 0.794 - -
26. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.631 0.703 - 0.928 - - - - - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
27. lrpap1 ENSDARG00000033604, ENSDARG00000116453 1389 1.624 - 0.810 - - - 0.814 - - - low density lipoprotein receptor-related protein associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5871]
28. ptplb ptplb 6135 1.624 - - 0.914 - - - - 0.710 -
29. C13H9orf72 C13H9orf72 2310 1.618 - - - - - - 0.812 0.806 -
30. celf1 ENSDARG00000005315 5598 1.614 - 0.803 - - - - 0.811 - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
31. cand1 ENSDARG00000017841 8164 1.614 - 0.828 - - - - 0.786 - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
32. eif3g ENSDARG00000016889 10367 1.613 - - 0.843 - - - 0.770 - - eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
33. TRIP10 TRIP10 1079 1.613 - 0.739 - - - - - 0.874 -
34. fkbp4 ENSDARG00000008447 3736 1.609 0.785 - - - - - 0.824 - - FK506 binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-514]
35. dcn ENSDARG00000012066 6182 1.608 - 0.800 - - - - 0.808 - - decorin [Source:ZFIN;Acc:ZDB-GENE-010102-1]
36. kifc1 ENSDARG00000001558 6658 1.593 - - 0.835 - - - - 0.758 - kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
37. smtnl1 ENSDARG00000041257 7410 1.583 0.736 - 0.847 - - - - - - smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
38. syf2 ENSDARG00000004706 2463 1.582 - 0.790 - - - - 0.792 - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
39. PPAP2A PPAP2A 2409 1.582 - 0.756 - - - - 0.826 - -
40. h2afx ENSDARG00000029406 2116 1.579 - 0.749 - - - - - 0.830 - H2A histone family, member X [Source:ZFIN;Acc:ZDB-GENE-040426-987]
41. si:dkey-11e23.5 si:dkey-11e23.5 3464 1.57 - 0.748 - - - - 0.822 - -
42. kita ENSDARG00000043317 1091 1.564 - - - - - - 0.705 0.859 - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-980526-464]
43. si:dkey-177p2.6 ENSDARG00000042322 2783 1.564 - 0.722 - - - 0.842 - - - si:dkey-177p2.6 [Source:ZFIN;Acc:ZDB-GENE-030131-5926]
44. tmed9 ENSDARG00000004261 10013 1.563 - - 0.759 - - - 0.804 - - transmembrane p24 trafficking protein 9 [Source:ZFIN;Acc:ZDB-GENE-050417-434]
45. napa napa 4444 1.562 - 0.845 - - - 0.717 - - -
46. mark2b ENSDARG00000032458 821 1.56 - 0.757 - - - - - 0.803 - MAP/microtubule affinity-regulating kinase 2b [Source:ZFIN;Acc:ZDB-GENE-080215-4]
47. cmss1 ENSDARG00000004727, ENSDARG00000112579 830 1.558 0.779 0.779 - - - - - - - cms1 ribosomal small subunit homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041010-146]
48. zgc:162780 ENSDARG00000069548 340 1.556 - 0.760 - - - - - 0.796 - zgc:162780 [Source:ZFIN;Acc:ZDB-GENE-070410-92]
49. meaf6 ENSDARG00000101216 6865 1.555 - 0.810 - - - - 0.745 - - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
50. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.553 - 0.813 - - - - 0.740 - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
51. chst11 ENSDARG00000034375 2701 1.553 - - - 0.767 - - - 0.786 - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
52. pdcd11 ENSDARG00000052480 2791 1.548 - - - - - - 0.791 0.757 - programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
53. MON2 ENSDARG00000099798 2359 1.544 - 0.797 - - - - 0.747 - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
54. arhgef4 ENSDARG00000012914 1464 1.543 - - - - - - 0.800 0.743 - Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
55. cd99l2 ENSDARG00000056722 5036 1.543 - - 0.828 - - - 0.715 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
56. ogdha ENSDARG00000034270 10334 1.536 - 0.739 - - - - 0.797 - - oxoglutarate (alpha-ketoglutarate) dehydrogenase a (lipoamide) [Source:ZFIN;Acc:ZDB-GENE-030131-2143]
57. igdcc4 ENSDARG00000076919 1303 1.535 - - - - - - 0.703 0.832 - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
58. zgc:101640 733 1.529 - 0.702 - - - - - 0.827 - zgc:101640, transcript variant X2
59. rcan1b 556 1.527 0.810 0.717 - - - - - - - regulator of calcineurin 1b
60. zcchc9 ENSDARG00000007531 1748 1.526 - 0.710 - - - - - 0.816 - zinc finger, CCHC domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-031030-9]
61. acat1 ENSDARG00000045888 1488 1.522 0.704 - - - - - 0.818 - - acetyl-CoA acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040808-68]
62. MEGF9 MEGF9 482 1.521 - - - - - - 0.733 0.788 -
63. tbc1d12a ENSDARG00000038237 698 1.516 - - - - - - 0.702 0.814 - TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
64. rap2c ENSDARG00000015649 4709 1.506 0.804 - - - - - 0.702 - - RAP2C, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041024-1]
65. sypl2a ENSDARG00000055307, ENSDARG00000115972 7103 1.505 - 0.767 - - - - - 0.738 - synaptophysin-like 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1434]
66. snx27a ENSDARG00000033804 2249 1.502 - 0.747 - - - - 0.755 - - sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
67. ralba ENSDARG00000040778 1574 1.493 0.758 - - - - - - 0.735 - v-ral simian leukemia viral oncogene homolog Ba (ras related) [Source:ZFIN;Acc:ZDB-GENE-040801-267]
68. amotl2a ENSDARG00000061923 4713 1.473 - 0.766 - - - - 0.707 - - angiomotin like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-9770]
69. pqbp1 ENSDARG00000029724 1472 1.469 - 0.704 - - - - - 0.765 - polyglutamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-158]
70. aifm1 ENSDARG00000058088, ENSDARG00000117164 2038 1.463 - 0.754 - - - - - 0.709 - apoptosis-inducing factor, mitochondrion-associated 1 [Source:ZFIN;Acc:ZDB-GENE-030826-11]
71. fam208b ENSDARG00000074168 2244 1.458 - 0.748 - - - - 0.710 - - family with sequence similarity 208, member B [Source:ZFIN;Acc:ZDB-GENE-041111-225]
72. atp5j 4272 1.454 - 0.749 - - - - 0.705 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
73. bsg ENSDARG00000019881 11894 1.452 - - 0.719 - - - 0.733 - - basigin [Source:ZFIN;Acc:ZDB-GENE-030131-9638]
74. CR383676.3 CR383676.3 2650 1.451 - 0.746 - - - - - 0.705 -
75. rasa1a ENSDARG00000035535 2007 1.447 - 0.729 - - - - 0.718 - - RAS p21 protein activator (GTPase activating protein) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4694]
76. thbs1b ENSDARG00000010785 3095 1.437 - 0.732 - - - - 0.705 - - thrombospondin 1b [Source:ZFIN;Acc:ZDB-GENE-020708-1]
77. naa15a ENSDARG00000003213 5889 1.431 - - - 0.724 - - 0.707 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
78. hmgcrb ENSDARG00000105206 2080 0.976 - - 0.976 - - - - - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
79. wu:fc26g07 wu:fc26g07 1165 0.974 - - 0.974 - - - - - -
80. pdzrn3b ENSDARG00000073869 1566 0.972 - - 0.972 - - - - - - PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
81. slain2 ENSDARG00000032114 798 0.972 - - 0.972 - - - - - - SLAIN motif family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-251]
82. fgd4a ENSDARG00000101471, ENSDARG00000115095 1887 0.972 - - 0.972 - - - - - - FYVE, RhoGEF and PH domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-050420-347]
83. smad4 smad4 2519 0.971 - - 0.971 - - - - - -
84. usp8 ENSDARG00000063719 643 0.971 - - 0.971 - - - - - - ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]
85. MRPL51 ENSDARG00000041340, ENSDARG00000113440 1544 0.97 - - 0.970 - - - - - - mitochondrial ribosomal protein L51 [Source:ZFIN;Acc:ZDB-GENE-050320-40]
86. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 0.97 - - 0.970 - - - - - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
87. CLIP4 ENSDARG00000096961 363 0.969 - - 0.969 - - - - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
88. CT573103.1 ENSDARG00000097550 950 0.969 - - 0.969 - - - - - -
89. mrpl22 ENSDARG00000109961 1374 0.969 - - 0.969 - - - - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
90. rela ENSDARG00000098696 889 0.969 - - 0.969 - - - - - - v-rel avian reticuloendotheliosis viral oncogene homolog A [Source:ZFIN;Acc:ZDB-GENE-040825-4]
91. PPP1R16B ENSDARG00000079860 390 0.969 - - 0.969 - - - - - - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
92. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 0.969 - - 0.969 - - - - - - zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
93. fkbp8 ENSDARG00000001734 1709 0.969 - - 0.969 - - - - - - FK506 binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-040426-1849]
94. qki2 ENSDARG00000010018 2230 0.969 - - 0.969 - - - - - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
95. flot2a ENSDARG00000004830 5276 0.968 - - 0.968 - - - - - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
96. znf410 ENSDARG00000008218 1807 0.968 - - 0.968 - - - - - - zinc finger protein 410 [Source:ZFIN;Acc:ZDB-GENE-040426-1817]
97. nrg1 ENSDARG00000104314 1081 0.968 - - 0.968 - - - - - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
98. NAIF1_1 NAIF1_1 1336 0.968 - - 0.968 - - - - - -
99. psmd10 ENSDARG00000015628, ENSDARG00000109675 983 0.968 - - 0.968 - - - - - - proteasome 26S subunit, non-ATPase 10 [Source:ZFIN;Acc:ZDB-GENE-050112-1]
100. actr10 ENSDARG00000038432 1598 0.968 - - 0.968 - - - - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]

There are 1041 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA