Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for abcf1

Gene Name Gene ID Reads Annotation
abcf1 ENSDARG00000031795 8635 ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]










Genes with expression patterns similar to abcf1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. abcf1 ENSDARG00000031795 8635 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
2. flncb ENSDARG00000018820 5595 3.568 0.769 0.973 0.957 - - - 0.869 - - filamin C, gamma b (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-041008-175]
3. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 3.47 0.729 0.930 0.920 - - - 0.891 - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
4. kpnb3 ENSDARG00000040245 7967 3.37 - - 0.992 0.778 - 0.759 0.841 - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
5. cct3 ENSDARG00000016173 15869 2.642 0.806 0.967 - - - - 0.869 - - chaperonin containing TCP1, subunit 3 (gamma) [Source:ZFIN;Acc:ZDB-GENE-020419-5]
6. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 2.625 - 0.810 0.978 - - - 0.837 - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
7. srsf6b ENSDARG00000016783 9926 2.535 - - 0.975 0.710 - - - - 0.850 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
8. stip1 ENSDARG00000004906 7742 2.516 0.755 - 0.978 - - - 0.783 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
9. hdgfrp2 7462 2.498 - - 0.932 0.723 - - - - 0.843 hepatoma-derived growth factor-related protein 2, transcript variant X1
10. sgcd ENSDARG00000098573 4980 2.49 0.712 0.962 - - - - 0.816 - - sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
11. tmsb ENSDARG00000054911 6411 2.467 0.774 - - - - - 0.842 - 0.851 thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
12. pfn2l ENSDARG00000012682 21690 2.436 0.818 - 0.780 - - - 0.838 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
13. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 2.408 0.751 0.886 - - - - 0.771 - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
14. cdkn1c cdkn1c 17427 2.385 0.734 0.873 - - - - 0.778 - -
15. naa10 ENSDARG00000071060, ENSDARG00000111093, ENSDARG00000116173 4657 2.358 0.709 0.915 - - - - 0.734 - - N(alpha)-acetyltransferase 10, NatA catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-040426-2648]
16. trim63 trim63 2437 2.351 0.705 0.920 - - - - 0.726 - -
17. pebp1 ENSDARG00000042069 6651 2.35 0.721 - - - - - 0.826 - 0.803 phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
18. ppp1r14c ENSDARG00000077341 1587 2.349 0.737 - - - - - 0.837 - 0.775 protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
19. rpf1 ENSDARG00000005738, ENSDARG00000112347, ENSDARG00000115372 3522 2.336 - 0.911 - 0.701 - - - - 0.724 ribosome production factor 1 homolog [Source:ZFIN;Acc:ZDB-GENE-040625-177]
20. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.318 - - - 0.760 - - 0.798 - 0.760 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
21. PTGES3L PTGES3L 4801 2.309 0.762 0.754 - - - - 0.793 - -
22. si:rp71-45k5.4 ENSDARG00000035679 10411 2.302 - 0.870 - - - 0.719 - 0.713 - si:rp71-45k5.4 [Source:ZFIN;Acc:ZDB-GENE-060503-941]
23. wu:fb17g07 wu:fb17g07 10567 2.298 0.717 - - - - - 0.833 - 0.748
24. eps15l1a ENSDARG00000042670 1565 2.29 - 0.851 - - - 0.724 - - 0.715 epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
25. C13H10orf71 3489 2.289 0.765 - - - - 0.799 0.725 - - chromosome 13 C10orf71 homolog
26. dhfr ENSDARG00000004251 1824 2.259 - - - 0.802 - 0.740 0.717 - - dihydrofolate reductase [Source:ZFIN;Acc:ZDB-GENE-010406-5]
27. zswim5 ENSDARG00000055900 4243 2.253 - - - - 0.702 - 0.754 - 0.797 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
28. u2af2b ENSDARG00000011740 6946 2.252 - - - - - - 0.753 0.714 0.785 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
29. eif3ea ENSDARG00000090697 14670 2.217 0.703 0.754 - - 0.760 - - - - eukaryotic translation initiation factor 3, subunit E, a [Source:ZFIN;Acc:ZDB-GENE-030131-3827]
30. g3bp1 ENSDARG00000017741 7622 2.216 0.747 - - - - 0.718 0.751 - - GTPase activating protein (SH3 domain) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7452]
31. ndufv3 ENSDARG00000090389 4829 1.882 - 0.906 0.976 - - - - - - NADH:ubiquinone oxidoreductase subunit V3 [Source:ZFIN;Acc:ZDB-GENE-030131-6500]
32. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 1.823 - 0.841 0.982 - - - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
33. ddx3 ddx3 4076 1.819 - 0.838 0.981 - - - - - -
34. gars ENSDARG00000059070 17015 1.807 - 0.935 - - - - 0.872 - - glycyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-9174]
35. PYURF ENSDARG00000045773 4576 1.793 - - 0.981 - - - 0.812 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
36. COMP 2018 1.788 - 0.930 - - - - 0.858 - - cartilage oligomeric matrix protein, transcript variant X1
37. rcn1 ENSDARG00000070006 8455 1.78 - 0.838 0.942 - - - - - - reticulocalbin 1, EF-hand calcium binding domain [Source:ZFIN;Acc:ZDB-GENE-080225-33]
38. cdv3 ENSDARG00000023028 12380 1.771 - 0.941 - - - - 0.830 - - carnitine deficiency-associated gene expressed in ventricle 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6034]
39. rae1 ENSDARG00000007196, ENSDARG00000113905 3321 1.77 - 0.836 0.934 - - - - - - ribonucleic acid export 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1029]
40. aup1 ENSDARG00000092609 2431 1.746 - - 0.982 - - 0.764 - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
41. acss2 ENSDARG00000037781, ENSDARG00000112371 3100 1.74 - - 0.982 - - - 0.758 - - acyl-CoA synthetase short chain family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-388]
42. rnmt ENSDARG00000070553 1743 1.74 - - 0.982 - - 0.758 - - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
43. tle2 5014 1.736 - - 0.982 - - - 0.754 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
44. tox3 ENSDARG00000073957 3075 1.732 - - 0.935 - - - - - 0.797 TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
45. PSIP1 PSIP1 5252 1.729 - - - - - - 0.855 - 0.874
46. ptbp2a ENSDARG00000101947 1921 1.728 - - 0.983 - - 0.745 - - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
47. ndufa12 ENSDARG00000042469, ENSDARG00000116793 3843 1.717 - 0.852 - - - - 0.865 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:ZFIN;Acc:ZDB-GENE-050828-1]
48. hnrnpm ENSDARG00000061735 19428 1.715 - - 0.893 - - - - - 0.822 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
49. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.713 - 0.875 - - - 0.838 - - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
50. map3k3 ENSDARG00000060348 1482 1.711 - - 0.981 - - 0.730 - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
51. bin1 bin1 3199 1.698 0.732 0.966 - - - - - - -
52. ptcd3 ENSDARG00000103856 2107 1.697 - 0.874 - - - - 0.823 - - pentatricopeptide repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6849]
53. WU:FC32F04 WU:FC32F04 2525 1.697 0.773 - 0.924 - - - - - -
54. sdhdb ENSDARG00000030139 9761 1.695 0.803 0.892 - - - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
55. gnl3 ENSDARG00000006219 3854 1.694 - - 0.992 - - 0.702 - - - guanine nucleotide binding protein-like 3 (nucleolar) [Source:ZFIN;Acc:ZDB-GENE-030131-616]
56. celf1 ENSDARG00000005315 5598 1.693 - - 0.969 - - - 0.724 - - cugbp, Elav-like family member 1 [Source:ZFIN;Acc:ZDB-GENE-000501-1]
57. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 1.69 - - 0.982 - - - 0.708 - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
58. snrpd3l ENSDARG00000076283 7655 1.686 - - - 0.797 - - 0.889 - - small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
59. CR388002.1 CR388002.1 1998 1.682 0.796 - - - - - 0.886 - -
60. C5H2orf68 C5H2orf68 849 1.681 - - 0.981 - - - 0.700 - -
61. msna ENSDARG00000058128, ENSDARG00000114614 23727 1.676 0.710 - 0.966 - - - - - - moesin a [Source:ZFIN;Acc:ZDB-GENE-021211-2]
62. eaf2 ENSDARG00000010432 3768 1.669 - 0.893 - - - - 0.776 - - ELL associated factor 2 [Source:ZFIN;Acc:ZDB-GENE-040625-179]
63. lypla2 ENSDARG00000053656 8971 1.665 - - - - - - 0.796 - 0.869 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
64. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 1.662 - - 0.930 0.732 - - - - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
65. eef1db ENSDARG00000030053 5185 1.662 - 0.873 - - - - 0.789 - - eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]
66. USMG5 USMG5 10356 1.658 0.782 - - - - - 0.876 - -
67. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.658 0.799 - - - - - 0.859 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
68. pnrc2 ENSDARG00000053291, ENSDARG00000112537 50848 1.657 - - 0.918 0.739 - - - - - proline-rich nuclear receptor coactivator 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5475]
69. lsm6 ENSDARG00000036995 4377 1.654 0.751 - - - - - 0.903 - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
70. eif2s1b ENSDARG00000052178 11961 1.652 - 0.767 - - - - 0.885 - - eukaryotic translation initiation factor 2, subunit 1 alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-283]
71. cdca7a ENSDARG00000077620 9345 1.65 - 0.855 - 0.795 - - - - - cell division cycle associated 7a [Source:ZFIN;Acc:ZDB-GENE-050417-29]
72. ank2b ENSDARG00000043313 3065 1.65 - - - - - - 0.875 - 0.775 ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
73. maea ENSDARG00000053691 1840 1.65 - 0.843 - - - 0.807 - - - macrophage erythroblast attacher [Source:ZFIN;Acc:ZDB-GENE-030131-294]
74. nop16 ENSDARG00000044402 3645 1.647 - 0.911 - - - - 0.736 - - NOP16 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-267]
75. pa2g4a ENSDARG00000039578, ENSDARG00000115881 16166 1.644 0.789 - - - - - 0.855 - - proliferation-associated 2G4, a [Source:ZFIN;Acc:ZDB-GENE-030616-161]
76. rhoad rhoad 8007 1.636 - 0.840 - - - 0.796 - - -
77. zgc:92518 ENSDARG00000016343 3837 1.635 0.805 - - - - - 0.830 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
78. txlnbb ENSDARG00000076241 6396 1.635 0.812 - - - - - 0.823 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
79. arvcfb ENSDARG00000061688 2388 1.634 0.720 - - - - - 0.914 - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
80. psme4b ENSDARG00000018742, ENSDARG00000112854, ENSDARG00000114902 2916 1.631 - 0.882 - - - - 0.749 - - proteasome activator subunit 4b [Source:ZFIN;Acc:ZDB-GENE-100316-4]
81. plcg1 ENSDARG00000038442 5324 1.631 - - - - - - 0.824 - 0.807 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
82. slc29a1a ENSDARG00000101289 2074 1.631 - - - 0.815 - - - - 0.816 solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
83. snoU83B snoU83B 4666 1.629 - 0.913 - - - - 0.716 - -
84. znf865 ENSDARG00000036698 15532 1.629 - - - 0.733 - - 0.896 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
85. murcb murcb 13655 1.621 0.812 - - - - - 0.809 - -
86. ebf3 ebf3 4238 1.619 - - - - - - 0.778 - 0.841
87. bves ENSDARG00000058548 2291 1.619 0.724 0.895 - - - - - - - blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
88. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.618 - - - - - - 0.780 - 0.838 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
89. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 1.617 0.733 - - - - - 0.884 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
90. eif3s10 ENSDARG00000076815 10822 1.617 0.774 - - - - - - - 0.843 eukaryotic translation initiation factor 3, subunit 10 (theta) [Source:ZFIN;Acc:ZDB-GENE-030131-5726]
91. wu:fc51f04 wu:fc51f04 7074 1.616 - - - 0.837 - - - - 0.779
92. ntmt1 ENSDARG00000022399 5779 1.616 0.822 - - - - - 0.794 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
93. klhl41b ENSDARG00000006757 10762 1.615 0.847 - - - - - 0.768 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
94. uck2a ENSDARG00000006074 1554 1.611 - 0.859 - - - - 0.752 - - uridine-cytidine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7158]
95. xirp2a ENSDARG00000071113 7113 1.61 0.821 - - - - - 0.789 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
96. syncripl ENSDARG00000026723 3889 1.609 - - - - - - 0.794 - 0.815 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
97. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.606 - 0.860 - - - - - - 0.746 ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
98. SLC12A6 SLC12A6 883 1.605 - 0.824 - - - 0.781 - - -
99. TMPO TMPO 3264 1.604 0.802 - - - - - 0.802 - -
100. chrna1 ENSDARG00000009021 2931 1.604 0.752 - - - - - 0.852 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]

There are 2137 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA