Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for abca1b

Gene Name Gene ID Reads Annotation
abca1b ENSDARG00000079009 14119 ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]










Genes with expression patterns similar to abca1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. abca1b ENSDARG00000079009 14119 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ATP-binding cassette, sub-family A (ABC1), member 1B [Source:ZFIN;Acc:ZDB-GENE-030131-9826]
2. pla2g12b ENSDARG00000015662 27239 6.928 0.865 0.750 0.936 0.904 - 0.918 0.811 0.850 0.894 phospholipase A2, group XIIB [Source:ZFIN;Acc:ZDB-GENE-040426-2771]
3. apoeb ENSDARG00000040295 229165 6.476 0.718 0.749 0.809 0.832 - 0.919 0.857 0.749 0.843 apolipoprotein Eb [Source:ZFIN;Acc:ZDB-GENE-980526-368]
4. apoa1b ENSDARG00000101324 336817 6.079 0.821 - 0.932 0.849 - 0.853 0.862 0.849 0.913 apolipoprotein A-Ib [Source:ZFIN;Acc:ZDB-GENE-050302-172]
5. ces2 ENSDARG00000041569, ENSDARG00000110630 5541 5.915 - 0.701 0.778 0.929 - 0.949 0.940 0.817 0.801 carboxylesterase 2 (intestine, liver) [Source:ZFIN;Acc:ZDB-GENE-061013-99]
6. zgc:136410 ENSDARG00000102241 8433 5.762 - 0.716 0.902 0.849 - 0.962 0.787 0.704 0.842 zgc:136410 [Source:ZFIN;Acc:ZDB-GENE-060421-6071]
7. apoa4 apoa4 84813 5.732 0.762 - 0.850 0.780 - 0.846 0.717 0.874 0.903
8. ctsla ENSDARG00000007836 67814 5.731 0.760 0.744 - 0.785 - 0.923 0.797 0.821 0.901 cathepsin La [Source:ZFIN;Acc:ZDB-GENE-030131-106]
9. bhmt ENSDARG00000013430 91357 5.728 0.887 0.743 0.789 - - 0.786 0.917 0.854 0.752 betaine-homocysteine methyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-947]
10. apoa2 ENSDARG00000015866 297380 5.606 - 0.708 0.853 0.725 - 0.889 0.759 0.855 0.817 apolipoprotein A-II [Source:ZFIN;Acc:ZDB-GENE-030131-1046]
11. slc43a2b ENSDARG00000061120, ENSDARG00000117188 33657 5.409 - 0.781 0.957 0.935 - 0.945 - 0.873 0.918 solute carrier family 43 (amino acid system L transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-041212-6]
12. tfa ENSDARG00000016771 30517 5.336 - - 0.961 0.886 - 0.925 0.780 0.860 0.924 transferrin-a [Source:ZFIN;Acc:ZDB-GENE-980526-35]
13. NCOA7_1 NCOA7_1 3222 5.18 - - 0.824 0.914 - 0.864 0.883 0.782 0.913
14. hao1 ENSDARG00000024160 6104 5.163 0.831 - 0.812 0.867 - - 0.960 0.835 0.858 hydroxyacid oxidase (glycolate oxidase) 1 [Source:ZFIN;Acc:ZDB-GENE-060519-2]
15. cry3_1 cry3_1 3347 5.065 - - 0.865 0.731 - 0.924 0.867 0.804 0.874
16. apobb apobb 258472 5.052 - 0.707 0.912 0.849 - 0.843 - 0.886 0.855
17. rpia ENSDARG00000056640, ENSDARG00000110576 8288 5.046 0.928 - 0.916 - - 0.810 0.711 0.840 0.841 ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase) [Source:ZFIN;Acc:ZDB-GENE-041114-24]
18. sfxn2 ENSDARG00000017960, ENSDARG00000111267 3869 4.98 - - 0.855 0.739 - 0.833 0.941 0.769 0.843 sideroflexin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2831]
19. cfb ENSDARG00000055278, ENSDARG00000110358 1725 4.94 - - 0.810 0.810 - 0.849 0.903 0.775 0.793 complement factor B [Source:ZFIN;Acc:ZDB-GENE-980526-487]
20. dgat2 ENSDARG00000018846 5032 4.91 - 0.754 0.857 0.810 - 0.920 0.737 - 0.832 diacylglycerol O-acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-15]
21. APOB APOB 33858 4.906 - - 0.807 0.801 0.737 0.895 0.813 0.853 -
22. MPC2 ENSDARG00000024478 4194 4.903 - - 0.833 0.818 - 0.880 0.720 0.768 0.884 mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
23. apoa1a ENSDARG00000012076, ENSDARG00000110395 163437 4.869 0.887 - 0.862 0.797 - 0.759 0.740 0.824 - apolipoprotein A-Ia [Source:ZFIN;Acc:ZDB-GENE-990415-14]
24. fga ENSDARG00000020741 5580 4.862 - - 0.818 0.723 - 0.957 0.814 0.700 0.850 fibrinogen alpha chain [Source:ZFIN;Acc:ZDB-GENE-031010-21]
25. kng1 ENSDARG00000022372, ENSDARG00000112486 2503 4.819 - 0.709 0.750 0.860 - 0.842 - 0.809 0.849 kininogen 1 [Source:ZFIN;Acc:ZDB-GENE-041010-56]
26. spns1 ENSDARG00000011925, ENSDARG00000111727 3126 4.815 - - 0.808 0.760 - 0.910 0.711 0.808 0.818 spinster homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020228-1]
27. zgc:161979_1 zgc:161979_1 206500 4.806 - - 0.707 0.863 - 0.883 0.718 0.808 0.827
28. apoc1l apoc1l 398664 4.805 - 0.764 - 0.746 - 0.952 0.770 0.829 0.744
29. fgg ENSDARG00000037281, ENSDARG00000114705 10817 4.776 - 0.707 0.843 0.763 - 0.710 - 0.854 0.899 fibrinogen gamma chain [Source:ZFIN;Acc:ZDB-GENE-040426-1998]
30. slc43a2a ENSDARG00000036848 6798 4.728 - - 0.733 0.725 - 0.888 0.763 0.820 0.799 solute carrier family 43 (amino acid system L transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-040426-964]
31. gdpd1 ENSDARG00000017261, ENSDARG00000111194 2853 4.714 - - 0.779 0.861 - 0.925 0.720 0.700 0.729 glycerophosphodiester phosphodiesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040822-22]
32. dao.1 ENSDARG00000035602 11969 4.536 - - 0.948 0.866 - - 0.922 0.885 0.915 D-amino-acid oxidase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050913-127]
33. serpina1l ENSDARG00000090850 10625 4.495 - - 0.961 0.901 - 0.913 - 0.801 0.919 serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1, like [Source:ZFIN;Acc:ZDB-GENE-040721-3]
34. dmgdh ENSDARG00000025703 6088 4.478 - - 0.921 0.903 - - 0.935 0.860 0.859 dimethylglycine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-080227-8]
35. serpina1 ENSDARG00000090286 8108 4.459 - - 0.961 - - 0.941 0.834 0.870 0.853 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1421]
36. CD68 CD68 4599 4.454 - - 0.876 0.872 - 0.950 - 0.861 0.895
37. psap ENSDARG00000013968 22919 4.45 - - 0.916 0.936 - 0.928 - 0.880 0.790 prosaposin [Source:ZFIN;Acc:ZDB-GENE-020108-1]
38. CFI 3801 4.441 - - 0.904 0.882 - 0.915 0.886 0.854 - complement factor I
39. fgb ENSDARG00000008969 11737 4.39 - - 0.904 0.806 - 0.945 - 0.826 0.909 fibrinogen beta chain [Source:ZFIN;Acc:ZDB-GENE-030131-9261]
40. creb3l3 creb3l3 1981 4.354 - - 0.827 0.877 - 0.972 - 0.832 0.846
41. f2 ENSDARG00000036041 3129 4.35 - - 0.916 - - 0.854 0.973 0.783 0.824 coagulation factor II (thrombin) [Source:ZFIN;Acc:ZDB-GENE-030131-4606]
42. vtnb ENSDARG00000053831 2364 4.25 - - 0.860 0.845 - 0.936 - 0.716 0.893 vitronectin b [Source:ZFIN;Acc:ZDB-GENE-041116-1]
43. APOB_1 APOB_1 2217 4.247 - - 0.852 0.851 - 0.906 - 0.797 0.841
44. sb:cb37 ENSDARG00000041645 2018 4.243 - - 0.943 0.882 - 0.912 - 0.798 0.708 sb:cb37 [Source:ZFIN;Acc:ZDB-GENE-030131-9800]
45. sepp1b 1004 4.235 - - 0.858 0.847 - 0.946 - 0.812 0.772 selenoprotein P, plasma, 1b
46. sid4 sid4 1358 4.183 - - 0.858 0.886 - 0.935 - 0.768 0.736
47. rgs4 ENSDARG00000070047, ENSDARG00000116319 2461 4.178 - - 0.812 0.862 - 0.912 - 0.779 0.813 regulator of G protein signaling 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9839]
48. aldob ENSDARG00000053684 30498 4.175 - 0.783 0.914 0.899 - - - 0.827 0.752 aldolase b, fructose-bisphosphate [Source:ZFIN;Acc:ZDB-GENE-030131-383]
49. plg ENSDARG00000023111 2429 4.154 - - 0.899 0.780 - 0.855 - 0.848 0.772 plasminogen [Source:ZFIN;Acc:ZDB-GENE-030131-1411]
50. fabp1b.1 ENSDARG00000059227 5670 4.136 - - 0.784 0.837 - 0.896 - 0.734 0.885 fatty acid binding protein 1b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-96]
51. hp_1 ENSDARG00000051890, ENSDARG00000095807 1049 4.122 - - 0.870 0.770 - 0.829 - 0.805 0.848 haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
52. zgc:161979 zgc:161979 196746 4.118 - 0.714 - - - 0.828 0.802 0.850 0.924
53. fabp2 ENSDARG00000006427, ENSDARG00000110230 56349 4.103 - - 0.944 - - 0.730 0.774 0.729 0.926 fatty acid binding protein 2, intestinal [Source:ZFIN;Acc:ZDB-GENE-991019-5]
54. cask cask 3384 4.068 - - 0.813 0.869 - 0.818 - 0.820 0.748
55. mtp_1 3298 4.058 - - 0.810 0.788 - 0.847 - 0.820 0.793 microsomal triglyceride transfer protein
56. apoea ENSDARG00000102004 13212 4.049 - - 0.753 0.865 - 0.901 - 0.762 0.768 apolipoprotein Ea [Source:ZFIN;Acc:ZDB-GENE-010724-18]
57. TMEM179 ENSDARG00000013292 3452 4.018 - - 0.797 0.909 - 0.823 - 0.753 0.736 transmembrane protein 179 [Source:ZFIN;Acc:ZDB-GENE-040808-25]
58. slc39a5 ENSDARG00000079525 2157 4.016 - - 0.861 0.795 - 0.926 - 0.702 0.732 solute carrier family 39 (zinc transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060608-1]
59. c5 ENSDARG00000021004 3536 3.974 - - 0.714 0.746 - - 0.819 0.829 0.866 complement component 5 [Source:ZFIN;Acc:ZDB-GENE-120510-2]
60. zgc:152830 ENSDARG00000079932 12194 3.964 - - - 0.818 - 0.925 0.714 0.754 0.753 zgc:152830 [Source:ZFIN;Acc:ZDB-GENE-090312-55]
61. serpinf2b ENSDARG00000061383 3859 3.932 - - 0.747 0.826 - - 0.715 0.807 0.837 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2b [Source:ZFIN;Acc:ZDB-GENE-061215-114]
62. aqp12 ENSDARG00000043279 1881 3.922 - - 0.903 0.724 - 0.741 0.700 0.854 - aquaporin 12 [Source:ZFIN;Acc:ZDB-GENE-040718-310]
63. SLC22A23 ENSDARG00000078856 2921 3.905 - - 0.883 0.835 - 0.709 0.713 - 0.765 solute carrier family 22, member 23 [Source:ZFIN;Acc:ZDB-GENE-030131-3564]
64. zgc:158403 ENSDARG00000062757 710 3.894 - - 0.787 0.742 - 0.819 - 0.795 0.751 zgc:158403 [Source:ZFIN;Acc:ZDB-GENE-061215-116]
65. cyp2aa8 ENSDARG00000104540 2947 3.884 - - 0.775 - - 0.809 0.855 0.724 0.721 cytochrome P450, family 2, subfamily AA, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-041010-183]
66. myl6 ENSDARG00000008494, ENSDARG00000115496 16296 3.872 - 0.704 0.781 0.866 0.795 - - 0.726 - myosin, light chain 6, alkali, smooth muscle and non-muscle [Source:ZFIN;Acc:ZDB-GENE-041010-28]
67. miox ENSDARG00000002764 588 3.841 - - 0.776 0.775 - 0.752 - 0.715 0.823 myo-inositol oxygenase [Source:ZFIN;Acc:ZDB-GENE-050913-113]
68. pvalb9 ENSDARG00000071601, ENSDARG00000113946 30137 3.603 - - 0.954 0.898 - - - 0.853 0.898 parvalbumin 9 [Source:ZFIN;Acc:ZDB-GENE-030805-4]
69. mthfd1l ENSDARG00000042221, ENSDARG00000110473 19571 3.559 - - 0.862 - - 0.970 - 0.820 0.907 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like [Source:ZFIN;Acc:ZDB-GENE-041001-133]
70. g6pca.2 ENSDARG00000013721 2034 3.553 - - - - 0.861 0.966 - 0.869 0.857 glucose-6-phosphatase a, catalytic subunit, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050309-17]
71. CNDP1 CNDP1 6456 3.517 - - 0.935 - - 0.911 0.884 0.787 -
72. ckmt1 ENSDARG00000016598, ENSDARG00000113143 15024 3.491 - - 0.858 0.934 - - - 0.805 0.894 creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
73. suclg2 ENSDARG00000044914 7950 3.482 - - 0.914 - - 0.914 - 0.819 0.835 succinate-CoA ligase, GDP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-030114-3]
74. acp5a ENSDARG00000019763, ENSDARG00000111996 7752 3.479 - - 0.910 0.856 - - 0.866 0.847 - acid phosphatase 5a, tartrate resistant [Source:ZFIN;Acc:ZDB-GENE-040426-2864]
75. fahd2a ENSDARG00000103759 9581 3.468 - 0.869 0.922 - - - - 0.850 0.827 fumarylacetoacetate hydrolase domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-040426-2499]
76. fetub ENSDARG00000053973 43520 3.462 0.945 - - - - 0.915 - 0.725 0.877 fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
77. slc25a20 ENSDARG00000040401 9258 3.419 - - - 0.867 - 0.901 - 0.835 0.816 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1869]
78. npc1 ENSDARG00000017180 3724 3.401 - - 0.864 0.725 - 0.955 0.857 - - Niemann-Pick disease, type C1 [Source:ZFIN;Acc:ZDB-GENE-030131-3161]
79. gart ENSDARG00000101089 6062 3.377 - - 0.928 0.845 - 0.875 - 0.729 - phosphoribosylglycinamide formyltransferase [Source:ZFIN;Acc:ZDB-GENE-000616-14]
80. zgc:173961 zgc:173961 1540 3.377 - - 0.869 - - - 0.911 0.765 0.832
81. apom ENSDARG00000076838 4732 3.368 - - 0.828 0.849 - 0.904 - - 0.787 apolipoprotein M [Source:ZFIN;Acc:ZDB-GENE-010605-5]
82. nr0b2a ENSDARG00000044685 2508 3.366 - 0.717 0.927 0.866 - - - - 0.856 nuclear receptor subfamily 0, group B, member 2a [Source:ZFIN;Acc:ZDB-GENE-080403-1]
83. elovl5 ENSDARG00000004979 3032 3.363 - - 0.854 0.811 - 0.923 - - 0.775 ELOVL fatty acid elongase 5 [Source:ZFIN;Acc:ZDB-GENE-040407-2]
84. ass1 8099 3.352 - - - - - 0.918 0.891 0.756 0.787 argininosuccinate synthase 1
85. renbp ENSDARG00000008931 1848 3.351 - - - 0.733 - 0.887 - 0.867 0.864 renin binding protein [Source:ZFIN;Acc:ZDB-GENE-041212-34]
86. smpd2 smpd2 1792 3.35 - - 0.782 0.928 - - - 0.811 0.829
87. mthfd1b ENSDARG00000040492 3784 3.342 - - 0.854 0.764 - 0.914 - 0.810 - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b [Source:ZFIN;Acc:ZDB-GENE-020905-4]
88. fbp1b ENSDARG00000020364, ENSDARG00000111266 10050 3.337 - - 0.888 - - 0.931 0.712 0.806 - fructose-1,6-bisphosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-021206-11]
89. si:dkey-69o16.5 ENSDARG00000070057 3628 3.337 0.715 - - 0.843 - 0.915 - - 0.864 si:dkey-69o16.5 [Source:ZFIN;Acc:ZDB-GENE-081104-432]
90. rnasel3 ENSDARG00000036171, ENSDARG00000116275 3928 3.337 - - 0.897 0.780 - 0.937 - - 0.723 ribonuclease like 3 [Source:ZFIN;Acc:ZDB-GENE-050809-5]
91. npc2 ENSDARG00000090912 21929 3.334 0.745 - 0.812 - - - - 0.855 0.922 Niemann-Pick disease, type C2 [Source:ZFIN;Acc:ZDB-GENE-021206-13]
92. C3_2 C3_2 1084 3.332 - - 0.906 - - 0.828 0.735 - 0.863
93. lgals2b ENSDARG00000038153 2196 3.32 - - 0.788 0.843 - 0.936 - - 0.753 lectin, galactoside-binding, soluble, 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1590]
94. stra6 ENSDARG00000051874, ENSDARG00000115031 1625 3.319 - - 0.771 0.910 - - - 0.779 0.859 stimulated by retinoic acid 6 [Source:ZFIN;Acc:ZDB-GENE-060616-252]
95. ENSDARG00000086641 ENSDARG00000086641 1819 3.29 - - 0.837 0.863 - - 0.765 - 0.825
96. serpinc1 ENSDARG00000042684, ENSDARG00000110644, ENSDARG00000114606 1045 3.287 - - 0.852 0.777 - 0.846 - 0.812 - serpin peptidase inhibitor, clade C (antithrombin), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-264]
97. prkacba ENSDARG00000001782 1340 3.281 - - 0.803 - - 0.881 - 0.787 0.810 protein kinase, cAMP-dependent, catalytic, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1351]
98. zgc:158374 zgc:158374 2227 3.272 - - 0.812 0.861 - 0.816 - 0.783 -
99. c9 ENSDARG00000016319 3917 3.268 - - 0.910 0.766 - - - 0.860 0.732 complement component 9 [Source:ZFIN;Acc:ZDB-GENE-050522-442]
100. cfh ENSDARG00000100442, ENSDARG00000109660 2043 3.257 - - - 0.795 - 0.719 0.937 - 0.806 complement factor H [Source:ZFIN;Acc:ZDB-GENE-050208-661]

There are 691 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA