Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Gene Name Gene ID Reads Annotation
a ENSMUSG00000027596 75 nonagouti [Source:MGI Symbol;Acc:MGI:87853]







Genes with expression patterns similar to a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. a ENSMUSG00000027596 75 6 1.000 1.000 1.000 1.000 1.000 1.000 nonagouti [Source:MGI Symbol;Acc:MGI:87853]
2. Prr16 ENSMUSG00000073565 31 0.907 - - - - - 0.907 proline rich 16 [Source:MGI Symbol;Acc:MGI:1918623]
3. BC021891 15 0.904 - - - - - 0.904 cDNA sequence BC021891, transcript variant X1
4. 1600029D21Rik 1600029D21Rik 31 0.904 - - - - - 0.904
5. Gm25395 ENSMUSG00000087968 43 0.902 - - - - - 0.902 predicted gene, 25395 [Source:MGI Symbol;Acc:MGI:5455172]
6. Gm6139 ENSMUSG00000057244 13 0.902 - - - - - 0.902 predicted gene 6139 [Source:MGI Symbol;Acc:MGI:3643279]
7. Pkhd1 ENSMUSG00000043760 14 0.899 - - - - - 0.899 polycystic kidney and hepatic disease 1 [Source:MGI Symbol;Acc:MGI:2155808]
8. Gm13398 ENSMUSG00000087364 26 0.891 - - - - - 0.891 predicted gene 13398 [Source:MGI Symbol;Acc:MGI:3652315]
9. Gm6425 ENSMUSG00000086174 3 0.887 - - - - - 0.887 predicted pseudogene 6425 [Source:MGI Symbol;Acc:MGI:3646016]
10. Six6 ENSMUSG00000021099 3 0.887 - - - - - 0.887 sine oculis-related homeobox 6 [Source:MGI Symbol;Acc:MGI:1341840]
11. Gm25132 ENSMUSG00000064586 7 0.887 - - - - - 0.887 predicted gene, 25132 [Source:MGI Symbol;Acc:MGI:5454909]
12. Gm23563 ENSMUSG00000092641 17 0.887 - - - - - 0.887 predicted gene, 23563 [Source:MGI Symbol;Acc:MGI:5453340]
13. Hmgxb3 ENSMUSG00000024622 6 0.887 - - - - - 0.887 HMG box domain containing 3 [Source:MGI Symbol;Acc:MGI:2441817]
14. Gm17219 ENSMUSG00000090855 3 0.887 - - - - - 0.887 predicted gene 17219 [Source:MGI Symbol;Acc:MGI:4938046]
15. Gm17435 ENSMUSG00000097000 13 0.887 - - - - - 0.887 predicted gene, 17435 [Source:MGI Symbol;Acc:MGI:4937069]
16. Gm12468 ENSMUSG00000083985 14 0.887 - - - - - 0.887 predicted gene 12468 [Source:MGI Symbol;Acc:MGI:3652115]
17. Ccdc169 ENSMUSG00000048655 17 0.887 - - - - - 0.887 coiled-coil domain containing 169 [Source:MGI Symbol;Acc:MGI:2444356]
18. Gm15302 ENSMUSG00000084377 8 0.887 - - - - - 0.887 predicted gene 15302 [Source:MGI Symbol;Acc:MGI:3705638]
19. Pah ENSMUSG00000020051 8 0.887 - - - - - 0.887 phenylalanine hydroxylase [Source:MGI Symbol;Acc:MGI:97473]
20. Gm9845 ENSMUSG00000050533 6 0.887 - - - - - 0.887 predicted pseudogene 9845 [Source:MGI Symbol;Acc:MGI:3704215]
21. Gm16754 ENSMUSG00000097439 8 0.884 - - - - - 0.884 predicted gene, 16754 [Source:MGI Symbol;Acc:MGI:4439678]
22. Ubl7 ENSMUSG00000055720 10 0.883 - - - - - 0.883 ubiquitin-like 7 (bone marrow stromal cell-derived) [Source:MGI Symbol;Acc:MGI:1916709]
23. Traf1 ENSMUSG00000026875 9 0.882 - - - - - 0.882 TNF receptor-associated factor 1 [Source:MGI Symbol;Acc:MGI:101836]
24. Tubb4b-ps1 ENSMUSG00000095159 12 0.881 - - - - - 0.881 tubulin, beta 4B class IVB, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3642800]
25. Gm26788 ENSMUSG00000096992 3 0.88 - - - - - 0.880 predicted gene, 26788 [Source:MGI Symbol;Acc:MGI:5477282]
26. Gm10544 ENSMUSG00000097430 3 0.877 - - - - - 0.877 predicted gene 10544 [Source:MGI Symbol;Acc:MGI:3642892]
27. Gm26826 ENSMUSG00000097635 33 0.874 - - - - - 0.874 predicted gene, 26826 [Source:MGI Symbol;Acc:MGI:5477320]
28. 2010007H06Rik ENSMUSG00000044694 25 0.874 - - - - - 0.874 RIKEN cDNA 2010007H06 gene [Source:MGI Symbol;Acc:MGI:1917099]
29. Cldn19 ENSMUSG00000066058 14 0.87 - - - - - 0.870 claudin 19 [Source:MGI Symbol;Acc:MGI:3033992]
30. Emx1 ENSMUSG00000033726 16 0.862 - - - - - 0.862 empty spiracles homeobox 1 [Source:MGI Symbol;Acc:MGI:95387]
31. Zfp112 ENSMUSG00000052675 56 0.861 - - - - - 0.861 zinc finger protein 112 [Source:MGI Symbol;Acc:MGI:1929115]
32. Gm16386 ENSMUSG00000096975 11 0.861 - - - - - 0.861 predicted gene 16386 [Source:MGI Symbol;Acc:MGI:3646848]
33. E230001N04Rik ENSMUSG00000066170 39 0.86 - - - - - 0.860 RIKEN cDNA E230001N04 gene [Source:MGI Symbol;Acc:MGI:2443549]
34. 4833422C13Rik ENSMUSG00000074782 10 0.859 - - - - - 0.859 RIKEN cDNA 4833422C13 gene [Source:MGI Symbol;Acc:MGI:3603826]
35. Gm5453 ENSMUSG00000062461 26 0.859 - - - - - 0.859 predicted gene 5453 [Source:MGI Symbol;Acc:MGI:3648523]
36. Gm24489 Gm24489 8 0.858 - - - - - 0.858
37. Mettl3 ENSMUSG00000022160 30 0.856 - - - - - 0.856 methyltransferase like 3 [Source:MGI Symbol;Acc:MGI:1927165]
38. 1700030C12Rik ENSMUSG00000086459 4 0.856 - - - - - 0.856 RIKEN cDNA 1700030C12 gene [Source:MGI Symbol;Acc:MGI:1919496]
39. Aldh3b1 ENSMUSG00000024885 10 0.856 - - - 0.856 - - aldehyde dehydrogenase 3 family, member B1 [Source:MGI Symbol;Acc:MGI:1914939]
40. Cdh23 ENSMUSG00000012819 17 0.853 - - - - - 0.853 cadherin 23 (otocadherin) [Source:MGI Symbol;Acc:MGI:1890219]
41. BC043934 ENSMUSG00000056418 25 0.848 - - - - - 0.848 cDNA sequence BC043934 [Source:MGI Symbol;Acc:MGI:2679715]
42. Sowahd ENSMUSG00000044400 11 0.845 - - - - - 0.845 sosondowah ankyrin repeat domain family member D [Source:MGI Symbol;Acc:MGI:3045274]
43. Cnksr1 ENSMUSG00000028841 45 0.843 - - - - - 0.843 connector enhancer of kinase suppressor of Ras 1 [Source:MGI Symbol;Acc:MGI:2670958]
44. 1810019J16Rik 1810019J16Rik 121 0.84 - - - - - 0.840
45. Htr3b ENSMUSG00000008590 22 0.836 - - - - - 0.836 5-hydroxytryptamine (serotonin) receptor 3B [Source:MGI Symbol;Acc:MGI:1861899]
46. Clcnka ENSMUSG00000033770 16 0.835 - - - - - 0.835 chloride channel, voltage-sensitive Ka [Source:MGI Symbol;Acc:MGI:1329026]
47. Prr15l ENSMUSG00000047040 24 0.834 - - - - - 0.834 proline rich 15-like [Source:MGI Symbol;Acc:MGI:2387599]
48. Tmem221 ENSMUSG00000043664 8 0.833 - - - - - 0.833 transmembrane protein 221 [Source:MGI Symbol;Acc:MGI:3525074]
49. Slc25a34 ENSMUSG00000040740 6 0.832 - - - - - 0.832 solute carrier family 25, member 34 [Source:MGI Symbol;Acc:MGI:2686215]
50. Fbxo15 ENSMUSG00000034391 14 0.832 - - - - - 0.832 F-box protein 15 [Source:MGI Symbol;Acc:MGI:1354755]
51. Pkdrej ENSMUSG00000052496 7 0.831 - - - - - 0.831 polycystin (PKD) family receptor for egg jelly [Source:MGI Symbol;Acc:MGI:1338786]
52. Cstad ENSMUSG00000047363 22 0.829 - - - - - 0.829 CSA-conditional, T cell activation-dependent protein [Source:MGI Symbol;Acc:MGI:1925867]
53. Hapln3 ENSMUSG00000030606 185 0.823 - - - - - 0.823 hyaluronan and proteoglycan link protein 3 [Source:MGI Symbol;Acc:MGI:1914916]
54. Ccdc109b 54 0.815 - - 0.815 - - - coiled-coil domain containing 109B, transcript variant X3
55. Add2 ENSMUSG00000030000 32 0.814 - - - - - 0.814 adducin 2 (beta) [Source:MGI Symbol;Acc:MGI:87919]
56. Anxa1 ENSMUSG00000024659 60 0.81 - - - - - 0.810 annexin A1 [Source:MGI Symbol;Acc:MGI:96819]
57. Oaz2-ps ENSMUSG00000083610 8 0.81 - - - - - 0.810 ornithine decarboxylase antizyme 2, pseudogene [Source:MGI Symbol;Acc:MGI:3644634]
58. Bspry ENSMUSG00000028392 37 0.804 - - - - - 0.804 B-box and SPRY domain containing [Source:MGI Symbol;Acc:MGI:2177191]
59. Rnase1 ENSMUSG00000035896 6 0.799 - - - - - 0.799 ribonuclease, RNase A family, 1 (pancreatic) [Source:MGI Symbol;Acc:MGI:97919]
60. Gm5616 ENSMUSG00000063543 46 0.798 - - - - - 0.798 predicted gene 5616 [Source:MGI Symbol;Acc:MGI:3646416]
61. Gm12925 ENSMUSG00000087307 14 0.798 - - - - - 0.798 predicted gene 12925 [Source:MGI Symbol;Acc:MGI:3651536]
62. Gm9796 ENSMUSG00000045075 14 0.793 - - - - - 0.793 predicted gene 9796 [Source:MGI Symbol;Acc:MGI:3648412]
63. Dfnb59 23 0.785 - - - - - 0.785 deafness, autosomal recessive 59 (human), transcript variant X1
64. Gm23639 ENSMUSG00000092819 79 0.785 - - - - - 0.785 predicted gene, 23639 [Source:MGI Symbol;Acc:MGI:5453416]
65. Stmnd1 ENSMUSG00000063529 14 0.784 - - - 0.784 - - stathmin domain containing 1 [Source:MGI Symbol;Acc:MGI:2686420]
66. Trpc6 ENSMUSG00000031997 13 0.784 - - - 0.784 - - transient receptor potential cation channel, subfamily C, member 6 [Source:MGI Symbol;Acc:MGI:109523]
67. Ccdc142 ENSMUSG00000107499 18 0.784 - - - 0.784 - - coiled-coil domain containing 142 [Source:MGI Symbol;Acc:MGI:3045292]
68. 4932435O22Rik ENSMUSG00000062391 3 0.784 - - - 0.784 - - RIKEN cDNA 4932435O22 gene [Source:MGI Symbol;Acc:MGI:2442791]
69. Adcy3 ENSMUSG00000020654 7 0.784 - - - 0.784 - - adenylate cyclase 3 [Source:MGI Symbol;Acc:MGI:99675]
70. Gpbar1 ENSMUSG00000064272 7 0.784 - - - 0.784 - - G protein-coupled bile acid receptor 1 [Source:MGI Symbol;Acc:MGI:2653863]
71. Sprr2f ENSMUSG00000050635 4 0.784 - - - 0.784 - - small proline-rich protein 2F [Source:MGI Symbol;Acc:MGI:1330349]
72. Fam110c ENSMUSG00000036136 6 0.784 - - - 0.784 - - family with sequence similarity 110, member C [Source:MGI Symbol;Acc:MGI:1918813]
73. Gm14487 ENSMUSG00000085275 2 0.784 - - - 0.784 - - predicted gene 14487 [Source:MGI Symbol;Acc:MGI:3649724]
74. 4732465J04Rik ENSMUSG00000101517 8 0.784 - - - 0.784 - - RIKEN cDNA 4732465J04 gene [Source:MGI Symbol;Acc:MGI:3041208]
75. Gm15673 Gm15673 5 0.784 - - - 0.784 - -
76. Gm24443 ENSMUSG00000087867 1 0.784 - - - 0.784 - - predicted gene, 24443 [Source:MGI Symbol;Acc:MGI:5454220]
77. A430110L20Rik ENSMUSG00000054135 9 0.784 - - - 0.784 - - RIKEN cDNA A430110L20 gene [Source:MGI Symbol;Acc:MGI:3036249]
78. Gm12010 ENSMUSG00000083292 1 0.784 - - - 0.784 - - predicted gene 12010 [Source:MGI Symbol;Acc:MGI:3651312]
79. Olfr1124 ENSMUSG00000050772 3 0.784 - - - 0.784 - - olfactory receptor 1124 [Source:MGI Symbol;Acc:MGI:3030958]
80. Hist1h4h ENSMUSG00000060981 14 0.784 - - - 0.784 - - histone cluster 1, H4h [Source:MGI Symbol;Acc:MGI:2448427]
81. Gm20899 Gm20899 26 0.784 - - - 0.784 - -
82. Mia2 ENSMUSG00000021000 2 0.784 - - - 0.784 - - melanoma inhibitory activity 2 [Source:MGI Symbol;Acc:MGI:2159614]
83. Crtam ENSMUSG00000032021 6 0.784 - - - 0.784 - - cytotoxic and regulatory T cell molecule [Source:MGI Symbol;Acc:MGI:1859822]
84. Gm21982 ENSMUSG00000094365 15 0.784 - - - 0.784 - - predicted gene 21982 [Source:MGI Symbol;Acc:MGI:5439451]
85. Vrtn ENSMUSG00000071235 3 0.784 - - - 0.784 - - vertebrae development associated [Source:MGI Symbol;Acc:MGI:3588197]
86. Gm14169 ENSMUSG00000086118 4 0.784 - - - 0.784 - - predicted gene 14169 [Source:MGI Symbol;Acc:MGI:3651156]
87. Slc13a1 ENSMUSG00000029700 7 0.784 - - - 0.784 - - solute carrier family 13 (sodium/sulfate symporters), member 1 [Source:MGI Symbol;Acc:MGI:1859937]
88. A230005M16Rik ENSMUSG00000087612 12 0.784 - - - 0.784 - - RIKEN cDNA A230005M16 gene [Source:MGI Symbol;Acc:MGI:3603401]
89. Rpl23a ENSMUSG00000058546 15 0.784 - - - 0.784 - - ribosomal protein L23A [Source:MGI Symbol;Acc:MGI:3040672]
90. Ssxb2 ENSMUSG00000023165 1 0.784 - - - 0.784 - - synovial sarcoma, X member B2 [Source:MGI Symbol;Acc:MGI:2446771]
91. Gm17067 ENSMUSG00000091594 8 0.784 - - - 0.784 - - predicted gene 17067 [Source:MGI Symbol;Acc:MGI:4937894]
92. Gm25896 ENSMUSG00000065647 9 0.784 - - - 0.784 - - predicted gene, 25896 [Source:MGI Symbol;Acc:MGI:5455673]
93. A830035A12Rik ENSMUSG00000059706 2 0.784 - - - 0.784 - - RIKEN cDNA A830035A12 gene [Source:MGI Symbol;Acc:MGI:3045382]
94. Ldhc ENSMUSG00000030851 2 0.784 - - - 0.784 - - lactate dehydrogenase C [Source:MGI Symbol;Acc:MGI:96764]
95. Bcat2 ENSMUSG00000030826 198 0.781 - 0.781 - - - - branched chain aminotransferase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:1276534]
96. Zbtb8a ENSMUSG00000028807 233 0.779 - - 0.779 - - - zinc finger and BTB domain containing 8a [Source:MGI Symbol;Acc:MGI:1920930]
97. Aqp1 ENSMUSG00000004655 53 0.778 - - - - - 0.778 aquaporin 1 [Source:MGI Symbol;Acc:MGI:103201]
98. Gm10247 ENSMUSG00000068674 23 0.777 - - 0.777 - - - predicted gene 10247 [Source:MGI Symbol;Acc:MGI:3641838]
99. Dedd ENSMUSG00000013973 6 0.775 - - - - - 0.775 death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
100. Gm4963 ENSMUSG00000063739 18 0.772 - - - - - 0.772 predicted gene 4963 [Source:MGI Symbol;Acc:MGI:3645168]

There are 35 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA