Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ZIC3

Gene Name Gene ID Reads Annotation
ZIC3 ENSGALG00000031144 863 Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]











Genes with expression patterns similar to ZIC3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ZIC3 ENSGALG00000031144 863 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
2. DRAXIN ENSGALG00000004631 3122 4.211 - - 0.723 0.886 - 0.974 - - 0.732 0.896 dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
3. ZIC1 ENSGALG00000040532 6543 3.433 - - 0.744 0.858 - 0.939 - - - 0.892 Zic family member 1 [Source:NCBI gene;Acc:374103]
4. GHOX-7 GHOX-7 2555 3.412 - - 0.783 0.759 - 0.939 - - - 0.931
5. WNT4 ENSGALG00000041708 1277 3.262 - - 0.739 0.862 - 0.953 - - 0.708 - Wnt family member 4 [Source:NCBI gene;Acc:395561]
6. TRABD2A ENSGALG00000026395 704 3.233 - - 0.765 - - 0.924 - - 0.712 0.832 TraB domain containing 2A, transcript variant X3
7. CERCAM ENSGALG00000004986 5158 3.097 - - 0.711 - 0.726 0.795 0.865 - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
8. ISM1 ENSGALG00000009042 196 2.569 - - - 0.722 0.944 0.903 - - - - isthmin 1 [Source:HGNC Symbol;Acc:HGNC:16213]
9. ENSGALG00000026584 ENSGALG00000026584 77 2.485 - - - 0.880 0.903 0.702 - - - -
10. PCDH8 ENSGALG00000036258 1945 2.411 - 0.771 - - 0.819 0.821 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
11. OLIG3 ENSGALG00000013862 51 2.395 - - - 0.789 - 0.742 - - - 0.864 oligodendrocyte transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:18003]
12. MSX2 ENSGALG00000038848 6950 2.387 - 0.773 - - 0.871 0.743 - - - - msh homeobox 2 [Source:NCBI gene;Acc:395245]
13. SRGAP3 ENSGALG00000008378 4331 2.382 - - - 0.798 0.769 0.815 - - - - SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
14. SALL1 ENSGALG00000039238 3740 2.381 - 0.737 - - - - 0.865 - 0.779 - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
15. PAX-7 PAX-7 3856 2.371 - - - - - 0.755 0.810 - - 0.806
16. BMP7 ENSGALG00000007668 6645 2.367 - 0.761 - - 0.738 0.868 - - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
17. ASTN1 ENSGALG00000004472 855 2.332 - - 0.811 - 0.737 0.784 - - - - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
18. CTGF ENSGALG00000037402 1557 2.285 - - - - 0.708 0.726 0.851 - - - connective tissue growth factor [Source:NCBI gene;Acc:374135]
19. DENND5B 4077 1.832 - - - - 0.935 0.897 - - - - DENN domain containing 5B, transcript variant X1
20. PLPPR1 ENSGALG00000015542 3179 1.796 - - - - 0.827 - 0.969 - - - phospholipid phosphatase related 1 [Source:HGNC Symbol;Acc:HGNC:25993]
21. LPXN 133 1.681 - - - - - - 0.885 0.796 - - leupaxin, transcript variant X4
22. IWS1 ENSGALG00000001803 2305 1.68 - - - - 0.800 - 0.880 - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
23. GNG10 ENSGALG00000015683 6905 1.677 - - - - 0.837 0.840 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
24. CHST1 ENSGALG00000008440 156 1.65 - - - - - 0.863 - - - 0.787 carbohydrate sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:1969]
25. PAX3 ENSGALG00000030944 2987 1.628 - - - - - 0.870 - - 0.758 - paired box 3 [Source:NCBI gene;Acc:374127]
26. NSG1 ENSGALG00000015010 5829 1.624 - - - 0.743 - 0.881 - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
27. OLFM1 ENSGALG00000002515 1841 1.621 - - - 0.893 0.728 - - - - - olfactomedin 1 [Source:NCBI gene;Acc:395535]
28. ANKFN1 ENSGALG00000003105 15 1.606 - - - - - 0.742 - - - 0.864 ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
29. ACP2 ENSGALG00000008211 77 1.574 - - - - 0.839 - - 0.735 - - acid phosphatase 2, lysosomal [Source:NCBI gene;Acc:428864]
30. JAM2 ENSGALG00000015746 514 1.566 - - - - 0.846 0.720 - - - - junctional adhesion molecule 2 [Source:NCBI gene;Acc:418476]
31. CKB ENSGALG00000011511 2100 1.53 - - - - 0.784 0.746 - - - - creatine kinase B [Source:NCBI gene;Acc:396248]
32. BOC ENSGALG00000015152 4868 1.507 - - - - 0.779 0.728 - - - - BOC cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17173]
33. C17orf75 ENSGALG00000003434 4262 1.507 - - - - - 0.773 - - - 0.734 chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
34. RTN1 ENSGALG00000012006 2438 1.496 - - - - - 0.788 - 0.708 - - reticulon 1 [Source:NCBI gene;Acc:378791]
35. DCLK1 ENSGALG00000041263 40 1.485 - - - - 0.734 - - 0.751 - - doublecortin like kinase 1 [Source:NCBI gene;Acc:418903]
36. ENSGALG00000006495 ENSGALG00000006495 4 1.478 - - - 0.736 - 0.742 - - - -
37. WNT3 ENSGALG00000001079 8 1.478 - - - 0.736 - 0.742 - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
38. CSPG5 ENSGALG00000032184 991 1.455 - - - 0.708 - 0.747 - - - - chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
39. HES5 ENSGALG00000001141 6514 1.449 - - - - - 0.701 - - 0.748 - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
40. CD4 ENSGALG00000014477 19 0.989 - - - - - - - 0.989 - - CD4 molecule [Source:NCBI gene;Acc:395362]
41. GFAP ENSGALG00000000909 21 0.987 - - - - - - - 0.987 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
42. AQP12 AQP12 11 0.986 - - - - - - - 0.986 - -
43. USP53 ENSGALG00000011990 12 0.986 - - - - - - - 0.986 - - ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
44. SDR42E2 ENSGALG00000006964 57 0.986 - - - - - - - 0.986 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
45. PLB1 PLB1 101 0.985 - - - - - - - 0.985 - -
46. FOXP4 ENSGALG00000033497 13 0.985 - - - - - - - 0.985 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
47. STAB1 21 0.985 - - - - - - - 0.985 - - stabilin 1, transcript variant X2
48. ENSGALG00000019053 ENSGALG00000019053 8 0.985 - - - - - - - 0.985 - -
49. APOAIV APOAIV 5 0.985 - - - - - - - 0.985 - -
50. GINS3 ENSGALG00000031209 32 0.985 - - - - - - - 0.985 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
51. CCDC96 9 0.985 - - - - - - - 0.985 - - coiled-coil domain containing 96
52. TMCO4 ENSGALG00000004081 31 0.983 - - - - - - - 0.983 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
53. INA ENSGALG00000028238 208 0.983 - - - - - - - 0.983 - - internexin neuronal intermediate filament protein alpha
54. KRT20 ENSGALG00000019716 11 0.982 - - - - - - - 0.982 - - keratin 20 [Source:NCBI gene;Acc:420045]
55. ICOS ENSGALG00000008656 27 0.982 - - - - - - - 0.982 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
56. MAPT ENSGALG00000000625 659 0.979 - - - - - - - 0.979 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
57. DNAI2 ENSGALG00000004495 45 0.976 - - - - - - - 0.976 - - dynein axonemal intermediate chain 2
58. ANKRD44 ENSGALG00000007996 17 0.976 - - - - - - - 0.976 - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
59. ABCA8 ENSGALG00000021399 11 0.975 - - - - - - - 0.975 - - ATP binding cassette subfamily A member 8
60. KLRD1 ENSGALG00000014722 27 0.973 - - - - - - - 0.973 - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
61. RIPK4 ENSGALG00000040189 102 0.968 - - - - - - - 0.968 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
62. IRG1 IRG1 21 0.968 - - - - - - - 0.968 - -
63. HAVCR1 ENSGALG00000017362 25 0.964 - - - - - - - 0.964 - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
64. KIAA0513 ENSGALG00000025938 46 0.963 - - - - - - - 0.963 - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
65. PAK2 ENSGALG00000006426 283 0.963 - - - - - - - 0.963 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
66. NXPH2 ENSGALG00000029083 353 0.961 - - - - - - - 0.961 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
67. EPB41L4A ENSGALG00000000234 113 0.953 - - - - - - - 0.953 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
68. ENPP3 ENSGALG00000037587 25 0.952 - - - - - - - 0.952 - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
69. LOC417973 ENSGALG00000019325 9 0.949 - - - - - - - 0.949 - - uncharacterized LOC417973, transcript variant X1
70. LMX1A ENSGALG00000003424 335 0.949 - - - - - - 0.949 - - - LIM homeobox transcription factor 1, alpha [Source:NCBI gene;Acc:777133]
71. PTPRD ENSGALG00000015058 37 0.949 - - - - - - - 0.949 - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
72. ZNFX1 ENSGALG00000004859 33 0.946 - - - - - - - 0.946 - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
73. C6H10ORF46 C6H10ORF46 1107 0.944 - - - - - - 0.944 - - -
74. MITF ENSGALG00000039583 865 0.942 - - - - - - 0.942 - - - melanogenesis associated transcription factor [Source:NCBI gene;Acc:395886]
75. ENSGALG00000019522 ENSGALG00000019522 122 0.941 - - - - - - - 0.941 - -
76. ENSGALG00000023731 ENSGALG00000023731 149 0.938 - - - - - - - 0.938 - -
77. RNASET2 ENSGALG00000011426 40 0.933 - - - - - - - 0.933 - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
78. DZANK1 ENSGALG00000008731 120 0.933 - - - - - - - 0.933 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
79. NRIP3 ENSGALG00000005903 58 0.933 - - - - - - - 0.933 - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
80. ABCC4 ENSGALG00000016896 154 0.932 - - - - - - - 0.932 - - ATP binding cassette subfamily C member 4 [Source:NCBI gene;Acc:418791]
81. SMYD1 ENSGALG00000015935 75 0.931 - - - - - - - 0.931 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
82. ENSGALG00000021882 ENSGALG00000021882 63 0.929 - - - - - - - 0.929 - -
83. WHSC1 1712 0.927 - - - - - - 0.927 - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
84. PRSS35 ENSGALG00000015847 52 0.927 - - - - - - - 0.927 - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
85. PQLC1 ENSGALG00000043150 3133 0.926 - - - - - - 0.926 - - - PQ loop repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:26188]
86. STXBP1 ENSGALG00000040003 157 0.925 - - - - - - - 0.925 - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
87. NOL12 ENSGALG00000012410 5658 0.919 - - - - - - 0.919 - - - nucleolar protein 12
88. SLAIN1 ENSGALG00000016913 461 0.919 - - - - - - 0.919 - - - SLAIN motif family member 1 [Source:HGNC Symbol;Acc:HGNC:26387]
89. SLC25A33 ENSGALG00000002519 4173 0.918 - - - - - - 0.918 - - - solute carrier family 25 member 33 [Source:HGNC Symbol;Acc:HGNC:29681]
90. LRRC4C ENSGALG00000007948 9 0.918 - - - - - 0.918 - - - - leucine rich repeat containing 4C [Source:HGNC Symbol;Acc:HGNC:29317]
91. CCDC137 ENSGALG00000004505 2205 0.917 - - - - - - 0.917 - - - coiled-coil domain containing 137 [Source:HGNC Symbol;Acc:HGNC:33451]
92. BSDC1 ENSGALG00000003405 3701 0.916 - - - - - - 0.916 - - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
93. CXCR4 ENSGALG00000012357 1320 0.916 - - - - - 0.916 - - - - C-X-C motif chemokine receptor 4 [Source:NCBI gene;Acc:395324]
94. TRAF-5 TRAF-5 102 0.914 - - - - - - - 0.914 - -
95. TP53I3 ENSGALG00000016502 178 0.912 - - - - - - - 0.912 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
96. ADCYAP1R1 ENSGALG00000005223 114 0.91 - - - - - - - 0.910 - - ADCYAP receptor type I [Source:NCBI gene;Acc:420386]
97. CCDC86 ENSGALG00000036935 5280 0.91 - - - - - - - 0.910 - - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
98. EML1 1941 0.909 - - - - - - 0.909 - - - echinoderm microtubule associated protein like 1, transcript variant X11
99. LCA5L ENSGALG00000016125 99 0.906 - - - - - - - 0.906 - - LCA5L, lebercilin like [Source:HGNC Symbol;Acc:HGNC:1255]
100. TAGLN3 ENSGALG00000015379 7865 0.906 - - - - - - 0.906 - - - transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]

There are 524 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA