Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ZIC1

Gene Name Gene ID Reads Annotation
ZIC1 ENSGALG00000040532 6543 Zic family member 1 [Source:NCBI gene;Acc:374103]











Genes with expression patterns similar to ZIC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ZIC1 ENSGALG00000040532 6543 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Zic family member 1 [Source:NCBI gene;Acc:374103]
2. DRAXIN ENSGALG00000004631 3122 4.55 - - 0.917 0.932 - 0.931 0.872 - - 0.898 dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
3. ZIC3 ENSGALG00000031144 863 3.433 - - 0.744 0.858 - 0.939 - - - 0.892 Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
4. HES5 ENSGALG00000001141 6514 3.429 - - 0.898 0.883 - 0.843 - - 0.805 - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
5. SRGAP3 ENSGALG00000008378 4331 3.367 - - 0.840 0.814 - 0.878 - - 0.835 - SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
6. CRABP-I ENSGALG00000003193 67258 3.344 - - 0.870 0.826 - 0.915 - - 0.733 - cellular retinoic acid binding protein 1 [Source:NCBI gene;Acc:374211]
7. OPTC ENSGALG00000003554 3698 3.274 - - 0.865 0.822 0.704 0.883 - - - - opticin [Source:NCBI gene;Acc:395130]
8. NSG1 ENSGALG00000015010 5829 3.176 - - - 0.768 0.701 0.932 - - 0.775 - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
9. PAX-7 PAX-7 3856 3.133 - - - 0.730 0.762 0.835 - - - 0.806
10. MARCKSL1 ENSGALG00000032335 88728 3.115 - - 0.740 0.731 - 0.828 - - 0.816 - MARCKS like 1 [Source:NCBI gene;Acc:770764]
11. WNT4 ENSGALG00000041708 1277 2.675 - - 0.838 0.878 - 0.959 - - - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
12. DENND5B 4077 2.589 - - 0.911 - - 0.923 - - - 0.755 DENN domain containing 5B, transcript variant X1
13. CERCAM ENSGALG00000004986 5158 2.576 - - 0.890 0.787 - 0.899 - - - - cerebral endothelial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:23723]
14. FZD3 ENSGALG00000042308 3356 2.572 - - 0.801 - - 0.879 - - 0.892 - frizzled class receptor 3 [Source:NCBI gene;Acc:395572]
15. PTPRZ1 ENSGALG00000040114 3410 2.538 - - 0.833 0.872 - 0.833 - - - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
16. GHOX-7 GHOX-7 2555 2.494 - - - 0.710 - 0.913 - - - 0.871
17. GNG10 ENSGALG00000015683 6905 2.484 - - 0.860 0.712 - 0.912 - - - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
18. CSPG5 ENSGALG00000032184 991 2.453 - - 0.744 0.870 - 0.839 - - - - chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
19. ENSGALG00000022967 ENSGALG00000022967 240 2.402 - - 0.856 - - 0.812 - - - 0.734
20. RTN1 ENSGALG00000012006 2438 2.357 - - 0.800 - - 0.851 - - 0.706 - reticulon 1 [Source:NCBI gene;Acc:378791]
21. RASSF2 ENSGALG00000030432 4822 2.351 - - 0.741 - - 0.859 - - 0.751 - Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
22. TAGLN3 ENSGALG00000015379 7865 2.347 - - 0.833 0.718 - - - - 0.796 - transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
23. NRCAM ENSGALG00000009514 490 2.286 - - 0.794 0.763 - 0.729 - - - - neuronal cell adhesion molecule [Source:NCBI gene;Acc:396202]
24. PKM ENSGALG00000001992 93960 2.222 - - 0.733 - 0.762 - - - 0.727 - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
25. ENSGALG00000027002 ENSGALG00000027002 7570 2.22 - - 0.792 0.713 - - - - 0.715 -
26. LFNG ENSGALG00000038515 5178 1.814 - - 0.879 - - 0.935 - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
27. NPAS3 ENSGALG00000029022 1950 1.81 - - 0.858 - - 0.952 - - - - neuronal PAS domain protein 3 [Source:HGNC Symbol;Acc:HGNC:19311]
28. TRABD2A ENSGALG00000026395 704 1.769 - - - - - 0.930 - - - 0.839 TraB domain containing 2A, transcript variant X3
29. ENSGALG00000026351 ENSGALG00000026351 49 1.753 - - - - - 0.765 - 0.988 - -
30. ENSGALG00000027373 ENSGALG00000027373 2129 1.68 - - 0.788 0.892 - - - - - -
31. LIPG ENSGALG00000043734 2490 1.664 - - 0.723 - - 0.941 - - - - lipase G, endothelial type [Source:HGNC Symbol;Acc:HGNC:6623]
32. PAX3 ENSGALG00000030944 2987 1.645 - - 0.751 - - 0.894 - - - - paired box 3 [Source:NCBI gene;Acc:374127]
33. SCRN1 ENSGALG00000011176 3783 1.64 - - - - - - 0.872 - 0.768 - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
34. DLL1 ENSGALG00000011182 1613 1.632 - - - 0.765 - 0.867 - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
35. CHL1 ENSGALG00000037856 1565 1.628 - - - 0.770 - 0.858 - - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
36. KANSL1L ENSGALG00000002866 44 1.625 - - - - - 0.718 - 0.907 - - KAT8 regulatory NSL complex subunit 1-like, transcript variant X1
37. C17orf75 ENSGALG00000003434 4262 1.617 - - - - - 0.833 - - - 0.784 chromosome 17 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:30173]
38. RGCC ENSGALG00000016954 1282 1.606 - - - 0.733 - - 0.873 - - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
39. CHST1 ENSGALG00000008440 156 1.602 - - - - - 0.792 - - - 0.810 carbohydrate sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:1969]
40. TUBB2B ENSGALG00000012821 41535 1.598 - - 0.797 - - - - - 0.801 - tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
41. LASP-2 LASP-2 4415 1.594 - - 0.761 - - 0.833 - - - -
42. ASTN1 ENSGALG00000004472 855 1.594 - - - - - 0.858 - - 0.736 - astrotactin 1 [Source:HGNC Symbol;Acc:HGNC:773]
43. PCDH8 ENSGALG00000036258 1945 1.582 - - 0.820 - - 0.762 - - - - protocadherin 8 [Source:NCBI gene;Acc:428065]
44. BTBD17 ENSGALG00000023359 87 1.573 - - - - - 0.826 - - - 0.747 BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
45. PROCA1 668 1.57 - - 0.832 - - 0.738 - - - - protein interacting with cyclin A1
46. NEFL ENSGALG00000000314 4883 1.564 - - 0.704 - - 0.860 - - - - neurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]
47. SLC35F1 ENSGALG00000029011 14728 1.562 - - - 0.756 - 0.806 - - - - solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
48. DPYSL4 ENSGALG00000010490 3431 1.557 - - - 0.770 - - - - 0.787 - dihydropyrimidinase like 4 [Source:HGNC Symbol;Acc:HGNC:3016]
49. ACVR2B ENSGALG00000006158 8692 1.54 - - - - - 0.767 - - 0.773 - activin A receptor type 2B [Source:NCBI gene;Acc:374213]
50. NCAM1 ENSGALG00000007839 19929 1.537 - - - 0.715 - - 0.822 - - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
51. PAX-6 PAX-6 2650 1.532 - - 0.734 0.798 - - - - - -
52. NHLH1 ENSGALG00000025817 1617 1.523 - - 0.742 - - - - - 0.781 - nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
53. GADD45_1 GADD45_1 1433 1.489 - - 0.759 - - 0.730 - - - -
54. SLC1A3 ENSGALG00000003582 2283 1.487 - - - 0.728 - 0.759 - - - - solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]
55. DCLK2 ENSGALG00000032386 2253 1.479 - - - - - 0.755 - - - 0.724 doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
56. CRMP1B CRMP1B 18633 1.468 - - 0.736 - - - - - 0.732 -
57. SMPD3 ENSGALG00000034950 4335 1.461 - - - 0.736 - 0.725 - - - - sphingomyelin phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:14240]
58. GDPD4 ENSGALG00000000690 824 1.43 - - - 0.709 - 0.721 - - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
59. LOC419390 ENSGALG00000001136 607 1.422 - - 0.714 - - 0.708 - - - - hairy and enhancer of split 5-like, transcript variant X1
60. HTR4 ENSGALG00000001383 2 0.99 - - - - - - - 0.990 - - 5-hydroxytryptamine receptor 4 [Source:HGNC Symbol;Acc:HGNC:5299]
61. C1orf101 C1orf101 1 0.989 - - - - - - - 0.989 - -
62. ACD ENSGALG00000044706 6 0.989 - - - - - - - 0.989 - - ACD, shelterin complex subunit and telomerase recruitment factor, transcript variant X4
63. MCMDC2 ENSGALG00000031863 3 0.989 - - - - - - - 0.989 - - minichromosome maintenance domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26368]
64. LRRK1 LRRK1 35 0.989 - - - - - - - 0.989 - -
65. ENSGALG00000008069 ENSGALG00000008069 2 0.989 - - - - - - - 0.989 - -
66. ZNF385C ENSGALG00000003403 9 0.989 - - - - - - - 0.989 - - zinc finger protein 385C [Source:HGNC Symbol;Acc:HGNC:33722]
67. KCTD15 ENSGALG00000004907 8 0.989 - - - - - - - 0.989 - - potassium channel tetramerization domain containing 15 [Source:HGNC Symbol;Acc:HGNC:23297]
68. NHLRC3 ENSGALG00000017037 6 0.989 - - - - - - - 0.989 - - NHL repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:33751]
69. ENSGALG00000016732 ENSGALG00000016732 24 0.989 - - - - - - - 0.989 - -
70. ANO9 ENSGALG00000004280 2 0.989 - - - - - - - 0.989 - - anoctamin 9 [Source:HGNC Symbol;Acc:HGNC:20679]
71. NOG ENSGALG00000003114 12 0.989 - - - - - - - 0.989 - - noggin [Source:NCBI gene;Acc:373912]
72. RANBP3L 19 0.989 - - - - - - - 0.989 - - RAN binding protein 3 like, transcript variant X2
73. NMU ENSGALG00000020151 29 0.989 - - - - - - - 0.989 - - neuromedin U [Source:NCBI gene;Acc:422748]
74. FAM81A ENSGALG00000004103 8 0.989 - - - - - - - 0.989 - - family with sequence similarity 81 member A [Source:HGNC Symbol;Acc:HGNC:28379]
75. ARL6 ENSGALG00000019215 11 0.989 - - - - - - - 0.989 - - ADP ribosylation factor like GTPase 6 [Source:NCBI gene;Acc:418433]
76. GRXCR1 ENSGALG00000023032 4 0.989 - - - - - - - 0.989 - - glutaredoxin and cysteine rich domain containing 1 [Source:HGNC Symbol;Acc:HGNC:31673]
77. ETV3 ENSGALG00000000669 7 0.989 - - - - - - - 0.989 - - ETS variant 3 [Source:HGNC Symbol;Acc:HGNC:3492]
78. SIM2 ENSGALG00000016044 5 0.989 - - - - - - - 0.989 - - SIM bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:10883]
79. PCOLCE2 ENSGALG00000002623 8 0.989 - - - - - - - 0.989 - - procollagen C-endopeptidase enhancer 2 [Source:HGNC Symbol;Acc:HGNC:8739]
80. FBXL20 ENSGALG00000001682 2 0.989 - - - - - - - 0.989 - - F-box and leucine rich repeat protein 20 [Source:HGNC Symbol;Acc:HGNC:24679]
81. MAP3K1 ENSGALG00000014718 60 0.986 - - - - - - - 0.986 - - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
82. BROX ENSGALG00000009413 15 0.986 - - - - - - - 0.986 - - BRO1 domain and CAAX motif containing [Source:HGNC Symbol;Acc:HGNC:26512]
83. HOXB4 ENSGALG00000000284 16 0.977 - - - - - - - 0.977 - - homeobox B4 [Source:NCBI gene;Acc:396230]
84. INTU ENSGALG00000010170 78 0.977 - - - - - - - 0.977 - - inturned planar cell polarity protein [Source:HGNC Symbol;Acc:HGNC:29239]
85. DYL2 ENSGALG00000007147 35 0.977 - - - - - - - 0.977 - - dynein light chain 2 cytoplasmic
86. DZIP1L 45 0.977 - - - - - - - 0.977 - - DAZ interacting zinc finger protein 1 like, transcript variant X1
87. RBPJL ENSGALG00000003952 131 0.968 - - - - - - - 0.968 - - recombination signal binding protein for immunoglobulin kappa J region like [Source:HGNC Symbol;Acc:HGNC:13761]
88. FLNB ENSGALG00000005678 68 0.957 - - - - - - - 0.957 - - filamin B [Source:NCBI gene;Acc:378913]
89. DNAJC30 150 0.939 - - - - - - - 0.939 - - DnaJ heat shock protein family (Hsp40) member C30, transcript variant X1
90. HOXB-7 HOXB-7 2066 0.926 - - - 0.926 - - - - - -
91. PHYKPL ENSGALG00000023920 6 0.91 - - - - - - - 0.910 - - 5-phosphohydroxy-L-lysine phospho-lyase [Source:HGNC Symbol;Acc:HGNC:28249]
92. DNM3 ENSGALG00000033244 6 0.909 - - - - - - - 0.909 - - dynamin 3 [Source:HGNC Symbol;Acc:HGNC:29125]
93. LRRC4C ENSGALG00000007948 9 0.906 - - - - - 0.906 - - - - leucine rich repeat containing 4C [Source:HGNC Symbol;Acc:HGNC:29317]
94. SERPINB1 ENSGALG00000019555 29 0.903 - - - - - - - 0.903 - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
95. XPA ENSGALG00000028998 8621 0.903 - - - - - - 0.903 - - - XPA, DNA damage recognition and repair factor [Source:NCBI gene;Acc:395659]
96. LARP4B ENSGALG00000006672 57 0.902 - - - - - - - 0.902 - - La ribonucleoprotein domain family member 4B [Source:HGNC Symbol;Acc:HGNC:28987]
97. CCDC58 ENSGALG00000014413 9022 0.898 - - - - - - 0.898 - - - coiled-coil domain containing 58 [Source:NCBI gene;Acc:418269]
98. ISM1 ENSGALG00000009042 196 0.894 - - - - - 0.894 - - - - isthmin 1 [Source:HGNC Symbol;Acc:HGNC:16213]
99. COL4A3BP ENSGALG00000014952 96 0.893 - - - - - - - 0.893 - - collagen type IV alpha 3 binding protein [Source:HGNC Symbol;Acc:HGNC:2205]
100. NEFM ENSGALG00000000317 6992 0.892 - - - - - 0.892 - - - - neurofilament medium [Source:NCBI gene;Acc:396206]

There are 310 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA