Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ZFR

Gene Name Gene ID Reads Annotation
ZFR ENSGALG00000003235 8466 zinc finger RNA binding protein, transcript variant X3











Genes with expression patterns similar to ZFR

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ZFR ENSGALG00000003235 8466 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc finger RNA binding protein, transcript variant X3
2. CRCP ENSGALG00000002587 8809 2.635 - - - - 0.911 - - 0.777 - 0.947 CGRP receptor component [Source:NCBI gene;Acc:396022]
3. MPRIP ENSGALG00000004798 6700 2.617 - - - - 0.888 - 0.756 - - 0.973 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
4. CCNK ENSGALG00000011138 6416 2.576 - - - - 0.874 - 0.842 - - 0.860 cyclin K [Source:NCBI gene;Acc:423446]
5. UBE2E3 ENSGALG00000020793 9517 2.426 - - - - 0.863 - 0.736 - - 0.827 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
6. PRPS1 ENSGALG00000004908 27994 2.375 - - - - 0.872 - 0.711 - - 0.792 phosphoribosyl pyrophosphate synthetase 1
7. GPS1 ENSGALG00000002827 8433 2.316 - - 0.746 - - - 0.763 - - 0.807 G protein pathway suppressor 1 [Source:NCBI gene;Acc:417382]
8. CNI CNI 18453 2.277 - - - - - - 0.757 0.791 - 0.729
9. SMC6 ENSGALG00000016467 3321 1.869 - - - - 0.909 - - - - 0.960 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
10. POLR1B ENSGALG00000032273 3845 1.846 - - - - 0.940 - - - - 0.906 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
11. TXNDC11 ENSGALG00000003154 2224 1.841 - - - - 0.892 - - - - 0.949 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
12. DAP3 ENSGALG00000019796 13278 1.84 - - - - 0.910 - - - - 0.930 death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
13. LOC770492 ENSGALG00000027778 695 1.84 - - - - 0.911 - - - - 0.929 ras-related and estrogen-regulated growth inhibitor-like
14. SUV39H2 ENSGALG00000013920 4360 1.84 - - - - - - 0.890 - - 0.950 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
15. NDUFA4 ENSGALG00000025999 53323 1.838 - - - - 0.899 - - - - 0.939 NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
16. CKAP2 ENSGALG00000017025 25020 1.836 - - - - 0.897 - - - - 0.939 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
17. FZD6 ENSGALG00000030626 3336 1.83 - - - - 0.915 - - - - 0.915 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
18. COG6 ENSGALG00000017035 2777 1.819 - - - - 0.909 - - - - 0.910 component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
19. CPSF2 ENSGALG00000010783 5236 1.81 - - - - - - 0.882 - - 0.928 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
20. CETN1 ENSGALG00000026741 7243 1.801 - - - - - - 0.861 - - 0.940 centrin 1 [Source:NCBI gene;Acc:422668]
21. PWP1 ENSGALG00000012631 10536 1.788 - - - - 0.894 - - - - 0.894 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
22. SLC35B1 ENSGALG00000035057 10683 1.785 - - - - - - - 0.832 - 0.953 solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
23. C1H21ORF33 ENSGALG00000019171 8910 1.766 - - - - 0.921 - - - - 0.845 chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
24. RNF219 ENSGALG00000016911 4458 1.757 - - - - - - 0.802 - - 0.955 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
25. ZNF318 ENSGALG00000034040 1758 1.756 - - - - 0.911 - - - - 0.845 zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
26. TMLHE ENSGALG00000007443 3619 1.75 - - - - - - - 0.803 - 0.947 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
27. LEPROT ENSGALG00000011047 7132 1.745 - - - - - - 0.877 - - 0.868 leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
28. SEC22B ENSGALG00000039704 16080 1.738 - - - - 0.875 - 0.863 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
29. PEX2 ENSGALG00000035752 4427 1.732 - - - - 0.898 - - - - 0.834 peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
30. C19orf70 ENSGALG00000026847 19315 1.73 - - - - 0.880 - - 0.850 - - chromosome 19 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33702]
31. GLRX5 ENSGALG00000011079 28943 1.729 - - - - 0.834 - 0.895 - - - glutaredoxin 5 [Source:NCBI gene;Acc:423440]
32. C1orf198 ENSGALG00000026600 5651 1.728 - - - - - - 0.781 - - 0.947 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
33. SCAMP5 ENSGALG00000014116 8877 1.722 - - - - 0.886 - - 0.836 - - secretory carrier membrane protein 5 [Source:HGNC Symbol;Acc:HGNC:30386]
34. PTP4A2 ENSGALG00000003265 24826 1.722 - - - - - - 0.827 - - 0.895 protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
35. CHMP5 ENSGALG00000013160 13347 1.717 - - - - - - 0.850 - - 0.867 charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
36. STX2 ENSGALG00000002536 10438 1.713 - - - - 0.755 - - - - 0.958 syntaxin 2 [Source:NCBI gene;Acc:378895]
37. DBI ENSGALG00000012112 6910 1.711 - - - - 0.927 - - 0.784 - - diazepam binding inhibitor, acyl-CoA binding protein [Source:NCBI gene;Acc:395263]
38. TMX4 ENSGALG00000028587 3513 1.711 - - - - 0.896 - - - - 0.815 thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
39. NARS ENSGALG00000040506 9506 1.711 - - - - - - - 0.739 - 0.972 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
40. QDPR ENSGALG00000030070 6953 1.71 - - - - - - - 0.797 - 0.913 quinoid dihydropteridine reductase [Source:NCBI gene;Acc:426335]
41. SERINC1 ENSGALG00000014868 12484 1.71 - - - - 0.844 - - - - 0.866 serine incorporator 1 [Source:NCBI gene;Acc:421722]
42. CDC73 ENSGALG00000002469 4586 1.708 - - - - - - 0.829 - - 0.879 cell division cycle 73 [Source:NCBI gene;Acc:424356]
43. EAPP ENSGALG00000010007 5080 1.693 - - - - - - - 0.875 - 0.818 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
44. CAMSAP2 ENSGALG00000002145 6109 1.685 - - - - - - 0.786 - - 0.899 calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
45. TMEM115 ENSGALG00000026965 13050 1.684 - - - - - - 0.765 - - 0.919 transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
46. gga-mir-7476 gga-mir-7476 20209 1.683 - - - - - - - 0.818 - 0.865
47. AIMP1 ENSGALG00000010553 17994 1.681 - - - - 0.911 - - - - 0.770 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 [Source:HGNC Symbol;Acc:HGNC:10648]
48. BRD1 ENSGALG00000029379 6047 1.68 - - - - - - 0.704 - - 0.976 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
49. ALDH7A1 ENSGALG00000008229 5891 1.678 - - - - - - - 0.791 - 0.887 aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
50. KIAA1524 ENSGALG00000015360 3527 1.678 - - - - 0.884 - 0.794 - - - KIAA1524 [Source:NCBI gene;Acc:418410]
51. TCEA2 ENSGALG00000005976 9143 1.675 - - - - 0.899 - - - - 0.776 transcription elongation factor A2 [Source:HGNC Symbol;Acc:HGNC:11614]
52. HNRNPLL ENSGALG00000008504 14719 1.675 - - - - - - 0.854 - - 0.821 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
53. CCDC51 ENSGALG00000006465 1845 1.674 - - 0.704 - - - - - - 0.970 coiled-coil domain containing 51, transcript variant X1
54. KLF3 ENSGALG00000041717 2787 1.674 - - - - 0.907 - - 0.767 - - Kruppel like factor 3 [Source:HGNC Symbol;Acc:HGNC:16516]
55. SDF2L1 ENSGALG00000031982 6084 1.668 - - - - - - 0.837 - - 0.831 stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
56. SNX4 ENSGALG00000012052 11634 1.667 - - - - - - 0.823 0.844 - - sorting nexin 4 [Source:HGNC Symbol;Acc:HGNC:11175]
57. ROMO1 ENSGALG00000027416 9560 1.666 - - - - 0.889 - - - - 0.777 reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
58. ARPP21 ENSGALG00000043240 2403 1.663 - - - - 0.926 - 0.737 - - - cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
59. NCBP1 ENSGALG00000002087 8907 1.659 - - - - 0.856 - - - - 0.803 nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
60. SYNGR2 ENSGALG00000027902 6953 1.659 - - - - - - 0.755 - - 0.904 Gallus gallus synaptogyrin 2 (SYNGR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318453]
61. GCSH ENSGALG00000032679 29231 1.659 - - - - - - - 0.747 - 0.912 glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
62. CYB5R2 ENSGALG00000032372 7967 1.654 - - - - 0.933 - - - - 0.721 cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
63. MAPKAPK2 ENSGALG00000000883 6174 1.654 - - - - 0.894 - - 0.760 - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
64. RRAS2 ENSGALG00000005998 6467 1.654 - - - - - - 0.799 0.855 - - RAS related 2 [Source:NCBI gene;Acc:423062]
65. HS2ST1 ENSGALG00000028423 4153 1.65 - - - - - - - 0.778 - 0.872 heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
66. BZW2 ENSGALG00000010809 29213 1.643 - - - - - - - 0.752 - 0.891 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
67. GGA.8379 GGA.8379 4419 1.642 - - - - - - 0.836 - - 0.806
68. CASP3 ENSGALG00000010638 11572 1.64 - - - - 0.844 - 0.796 - - - caspase 3 [Source:NCBI gene;Acc:395476]
69. PNRC2 ENSGALG00000004122 19228 1.636 - - - - - - 0.765 - - 0.871 proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
70. PPA2 ENSGALG00000010582 22301 1.625 - - - - 0.753 - - - - 0.872 pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
71. LYAR ENSGALG00000015000 10756 1.619 - - - - - - 0.859 0.760 - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
72. EIF2B2 ENSGALG00000010301 10772 1.618 - - - - - - - 0.786 - 0.832 eukaryotic translation initiation factor 2B subunit beta [Source:NCBI gene;Acc:423359]
73. MARK3 ENSGALG00000011505 14846 1.617 - - - - 0.808 - 0.809 - - - microtubule affinity regulating kinase 3 [Source:HGNC Symbol;Acc:HGNC:6897]
74. RNF8 ENSGALG00000023256 5495 1.614 - - 0.824 - - - - 0.790 - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
75. MED4 ENSGALG00000016995 3309 1.61 - - - - - - 0.776 0.834 - - mediator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:17903]
76. HELLS ENSGALG00000005451 7094 1.609 - - - - - - 0.761 - - 0.848 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
77. TIMM10 ENSGALG00000004845 31395 1.609 - - - - 0.874 - 0.735 - - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
78. CHCHD1 ENSGALG00000028809 9955 1.608 - - - - - - 0.720 0.888 - - coiled-coil-helix-coiled-coil-helix domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23518]
79. TCF25 ENSGALG00000000129 7587 1.606 - - - - - - - 0.773 - 0.833 transcription factor 25 [Source:HGNC Symbol;Acc:HGNC:29181]
80. ARPC1A ENSGALG00000004693 11583 1.605 - - - - - - 0.886 - - 0.719 actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
81. FANCL ENSGALG00000030022 7423 1.605 - - 0.733 - - - - - - 0.872 FA complementation group L [Source:NCBI gene;Acc:421202]
82. QTRTD1 QTRTD1 10765 1.603 - - - - - - 0.780 0.823 - -
83. SLC25A17 ENSGALG00000012013 13948 1.601 - - - - - - 0.765 0.836 - - solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]
84. PSMC2 ENSGALG00000008236 25980 1.6 - - - - - - - 0.737 - 0.863 proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
85. UFD1L 12964 1.6 - - - - - - 0.898 - - 0.702 ubiquitin fusion degradation 1 like (yeast)
86. ZZZ3 ENSGALG00000008988 3132 1.599 - - - - 0.899 - - 0.700 - - zinc finger ZZ-type containing 3, transcript variant X5
87. SUB1 ENSGALG00000003248 56412 1.598 - - - - 0.822 - - - - 0.776 SUB1 homolog, transcriptional regulator [Source:NCBI gene;Acc:427425]
88. GTPBP4 ENSGALG00000006703 16183 1.588 - - - - - - 0.834 - - 0.754 GTP binding protein 4 [Source:NCBI gene;Acc:420458]
89. C15ORF23 C15ORF23 14264 1.585 - - - - - - 0.783 0.802 - -
90. ADIPOR2 ENSGALG00000035533 6523 1.585 - - - - - - - 0.757 - 0.828 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
91. RBBP8 ENSGALG00000014982 3255 1.583 - - - - - - - 0.770 - 0.813 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
92. RCN1 RCN1 11758 1.582 - - - - - - 0.827 0.755 - -
93. CCNB2 ENSGALG00000004161 50324 1.576 - - - - 0.858 - - - - 0.718 cyclin B2 [Source:NCBI gene;Acc:415400]
94. HIF1A ENSGALG00000011870 9768 1.572 - - - - - - 0.755 0.817 - - hypoxia inducible factor 1 subunit alpha [Source:NCBI gene;Acc:374177]
95. PTCH1 ENSGALG00000012620 4840 1.564 - - - - - - - 0.792 - 0.772 patched 1 [Source:NCBI gene;Acc:395806]
96. PPP2R5A ENSGALG00000009828 10309 1.562 - - - - - - 0.773 0.789 - - protein phosphatase 2 regulatory subunit B'alpha [Source:HGNC Symbol;Acc:HGNC:9309]
97. ARF6 ENSGALG00000026944 22014 1.562 - - - - 0.825 - 0.737 - - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
98. ENSGALG00000028938 ENSGALG00000028938 18616 1.558 - - - - - - - 0.740 - 0.818
99. CACYBP ENSGALG00000004554 7320 1.555 - - - 0.710 - - 0.845 - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
100. KIDINS220 ENSGALG00000016409 854 1.551 - - 0.703 - - - - - - 0.848 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]

There are 1011 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA