Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ZFHX3

Gene Name Gene ID Reads Annotation
ZFHX3 ENSGALG00000000713 2340 zinc finger homeobox 3 [Source:NCBI gene;Acc:395682]











Genes with expression patterns similar to ZFHX3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ZFHX3 ENSGALG00000000713 2340 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc finger homeobox 3 [Source:NCBI gene;Acc:395682]
2. C15H12ORF49 C15H12ORF49 13250 1.697 - - - - 0.834 - - - - 0.863
3. LIMK1 ENSGALG00000001076 1931 1.665 - - - - - - 0.773 - - 0.892 LIM domain kinase 1 [Source:NCBI gene;Acc:373922]
4. CREPT CREPT 17142 1.659 - - - - 0.787 - - - - 0.872
5. WHSC1L1 4065 1.621 - - - - 0.837 - 0.784 - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
6. RAB21 ENSGALG00000010183 7718 1.605 - - - - 0.824 - 0.781 - - - RAB21, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18263]
7. VPS8 ENSGALG00000006704 5419 1.544 - - - - 0.833 - 0.711 - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
8. ELL2 ENSGALG00000014678 1111 1.524 - - 0.713 - - - - - - 0.811 elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
9. ATF7IP ENSGALG00000011814 1571 1.42 - - - - - - 0.701 - - 0.719 activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
10. ZNF639 ENSGALG00000005944 6387 0.994 - - - - 0.994 - - - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
11. NGFR ENSGALG00000035950 13452 0.974 - - - - 0.974 - - - - - nerve growth factor receptor [Source:NCBI gene;Acc:425805]
12. UBE2I ENSGALG00000006428 18421 0.974 - - - - 0.974 - - - - - ubiquitin conjugating enzyme E2 I [Source:NCBI gene;Acc:374123]
13. RAB7A ENSGALG00000005902 28565 0.971 - - - - 0.971 - - - - - RAB7A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9788]
14. DUT ENSGALG00000038032 34659 0.961 - - - - 0.961 - - - - - deoxyuridine triphosphatase [Source:NCBI gene;Acc:769338]
15. DCTN3 ENSGALG00000021365 22839 0.955 - - - - 0.955 - - - - - dynactin subunit 3 [Source:NCBI gene;Acc:427404]
16. PSMC6 ENSGALG00000012408 52068 0.938 - - - - 0.938 - - - - - proteasome 26S subunit, ATPase 6 [Source:NCBI gene;Acc:423586]
17. CLTA ENSGALG00000015326 26867 0.917 - - - - 0.917 - - - - - clathrin light chain A [Source:NCBI gene;Acc:427284]
18. TAX1BP3 ENSGALG00000004618 35172 0.882 - - - - 0.882 - - - - - Tax1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30684]
19. GADD45 GADD45 8780 0.877 - - - - - - - - - 0.877
20. LRP11 ENSGALG00000019987 3341 0.872 - - - - - - - - - 0.872 LDL receptor related protein 11 [Source:HGNC Symbol;Acc:HGNC:16936]
21. SYNCRIP ENSGALG00000015830 30555 0.867 - - - - 0.867 - - - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
22. PKM ENSGALG00000001992 93960 0.862 - - - - 0.862 - - - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
23. ENSGALG00000024104 ENSGALG00000024104 1051 0.86 - - - - - - - - - 0.860
24. IFNAR2 ENSGALG00000041867 1596 0.854 - - - - - - - - - 0.854 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
25. AP3B2 2331 0.851 - - - - - - - - - 0.851 adaptor related protein complex 3 beta 2 subunit, transcript variant X7
26. LSM5 ENSGALG00000041625 22307 0.851 - - - - 0.851 - - - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
27. STAT5 STAT5 1796 0.849 - - - - - - - - - 0.849
28. FAM96B 14435 0.847 - - - - - - - - - 0.847 family with sequence similarity 96 member B
29. HTRA3 ENSGALG00000034673 512 0.844 - - - - 0.844 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
30. CEP57 ENSGALG00000017201 524 0.842 - - - - - - - - - 0.842 centrosomal protein 57 [Source:HGNC Symbol;Acc:HGNC:30794]
31. TRAPPC2L ENSGALG00000006250 21772 0.841 - - - - 0.841 - - - - - trafficking protein particle complex 2 like [Source:HGNC Symbol;Acc:HGNC:30887]
32. ALKBH1 ENSGALG00000010485 1828 0.841 - - - - - - - - - 0.841 alkB homolog 1, histone H2A dioxygenase [Source:NCBI gene;Acc:428898]
33. NDST2 ENSGALG00000005107 4224 0.841 - - - - 0.841 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
34. gga-mir-6584 ENSGALG00000028834 1481 0.841 - - - - 0.841 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
35. PPAPDC1B PPAPDC1B 6698 0.84 - - - - 0.840 - - - - -
36. TNPO3 ENSGALG00000039420 5178 0.84 - - - - 0.840 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
37. ZNF142 ENSGALG00000011393 2078 0.839 - - - - - - - - - 0.839 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
38. PHKA1 ENSGALG00000004801 2510 0.838 - - - - 0.838 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
39. ABCC1 ENSGALG00000006646 2596 0.838 - - - - 0.838 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
40. MAP1B ENSGALG00000014999 6288 0.838 - - - - 0.838 - - - - - microtubule associated protein 1B
41. RNF113A ENSGALG00000000538 3985 0.838 - - - - 0.838 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
42. CHD7 ENSGALG00000041080 10201 0.837 - - - - - - - - - 0.837 chromodomain helicase DNA binding protein 7 [Source:NCBI gene;Acc:421140]
43. MYEOV2 MYEOV2 5155 0.837 - - - - 0.837 - - - - -
44. SEC61A2 ENSGALG00000036300 4235 0.837 - - - - 0.837 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
45. MRPL46 ENSGALG00000006782 5033 0.837 - - - - 0.837 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
46. HYOU1 ENSGALG00000007659 3555 0.837 - - - - 0.837 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
47. OBFC1 OBFC1 1071 0.837 - - - - - - - - - 0.837
48. MRPL22 ENSGALG00000003919 2760 0.837 - - - - 0.837 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
49. OPTC ENSGALG00000003554 3698 0.837 - - - - 0.837 - - - - - opticin [Source:NCBI gene;Acc:395130]
50. MLLT11 ENSGALG00000044125 1470 0.836 - - - - - - - - - 0.836 MLLT11, transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]
51. TMEM39B ENSGALG00000003287 4125 0.836 - - - - 0.836 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
52. RAE1 ENSGALG00000007653 8930 0.835 - - - - 0.835 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
53. IBA57 ENSGALG00000005328 4362 0.835 - - - - 0.835 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
54. TBC1D7 ENSGALG00000012731 4891 0.834 - - - - 0.834 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
55. MED1 ENSGALG00000001708 9556 0.834 - - - - 0.834 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
56. PKDCCB ENSGALG00000011166 74 0.834 - - - - - - - - - 0.834 protein kinase domain containing, cytoplasmic b
57. EPB41L1 ENSGALG00000034171 3616 0.834 - - - - 0.834 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
58. BCL9 ENSGALG00000037655 4620 0.834 - - - - 0.834 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
59. AGPAT3 ENSGALG00000031932 6903 0.833 - - - - 0.833 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
60. CAPN15 ENSGALG00000002018 3353 0.833 - - - - - - - - - 0.833 calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
61. MYL2_1 ENSGALG00000004582 2367 0.833 - - - - - - - - - 0.833 myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
62. NOL6 ENSGALG00000030730 7191 0.833 - - - - 0.833 - - - - - nucleolar protein 6
63. NSG1 ENSGALG00000015010 5829 0.832 - - - - 0.832 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
64. KCTD9 ENSGALG00000000275 3455 0.83 - - - - 0.830 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
65. TPGS2 ENSGALG00000026547 1967 0.83 - - - - - - - - - 0.830 tubulin polyglutamylase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24561]
66. RILPL2 ENSGALG00000003321 5632 0.828 - - - - 0.828 - - - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
67. CCDC59 ENSGALG00000028648 9272 0.828 - - - - 0.828 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
68. TBRG4 ENSGALG00000038102 9269 0.826 - - - - 0.826 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
69. USP1 ENSGALG00000010957 8297 0.826 - - - - 0.826 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
70. SUPV3L1 ENSGALG00000004197 4141 0.825 - - - - - - - - - 0.825 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
71. CTCF 10811 0.825 - - - - - - - - - 0.825 CCCTC-binding factor, transcript variant X2
72. THBS1 ENSGALG00000009626 3521 0.825 - - - - 0.825 - - - - - thrombospondin 1 [Source:NCBI gene;Acc:373987]
73. PCMTD2 ENSGALG00000005901 1833 0.824 - - - - - - - - - 0.824 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
74. FTSJ3 ENSGALG00000032993 8929 0.824 - - - - - - - - - 0.824 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
75. HMGB3 ENSGALG00000009071 12011 0.824 - - - - 0.824 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
76. SPG21 ENSGALG00000007262 8050 0.824 - - - - 0.824 - - - - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
77. TM2D2 ENSGALG00000003356 7088 0.823 - - - - 0.823 - - - - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
78. TTC3 ENSGALG00000016050 4115 0.822 - - - - - - - - - 0.822 tetratricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12393]
79. ESRP2 ENSGALG00000003374 4436 0.822 - - - - 0.822 - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
80. TRIM33 ENSGALG00000001976 7404 0.822 - - - - 0.822 - - - - - tripartite motif containing 33 [Source:HGNC Symbol;Acc:HGNC:16290]
81. C4orf27 C4orf27 16724 0.822 - - - - 0.822 - - - - -
82. RGP1 ENSGALG00000002394 5937 0.822 - - - - - - - - - 0.822 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
83. CENPJ ENSGALG00000017148 1415 0.822 - - - - - - - - - 0.822 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
84. HOXB3 ENSGALG00000043219 5198 0.822 - - - - 0.822 - - - - - homeobox B3 [Source:NCBI gene;Acc:395502]
85. DNAJC2 ENSGALG00000008249 28064 0.821 - - - - 0.821 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
86. RP9 ENSGALG00000035453 1186 0.821 - - - - - - - - - 0.821 retinitis pigmentosa 9 (autosomal dominant)
87. SHPK ENSGALG00000004637 2386 0.821 - - - - - - - - - 0.821 sedoheptulokinase, transcript variant X1
88. CENPE ENSGALG00000013208 12337 0.82 - - - - 0.820 - - - - - centromere protein E, transcript variant X4
89. PGAM5 ENSGALG00000002137 7700 0.82 - - - - 0.820 - - - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
90. GABRA3 ENSGALG00000007269 985 0.82 - - - - - - - - - 0.820 gamma-aminobutyric acid type A receptor alpha3 subunit [Source:HGNC Symbol;Acc:HGNC:4077]
91. M6PR ENSGALG00000031681 9442 0.82 - - - - 0.820 - - - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
92. ZFPM2 ENSGALG00000040079 942 0.82 - - - - - - - - - 0.820 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
93. KIF1A ENSGALG00000006221 1989 0.82 - - - - - - - - - 0.820 kinesin family member 1A [Source:HGNC Symbol;Acc:HGNC:888]
94. MRPS11 ENSGALG00000006777 16009 0.819 - - - - 0.819 - - - - - mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:415498]
95. UQCRC2 ENSGALG00000002490 23477 0.819 - - - - 0.819 - - - - - ubiquinol-cytochrome c reductase core protein 2 [Source:HGNC Symbol;Acc:HGNC:12586]
96. OAF ENSGALG00000006715 12518 0.818 - - - - 0.818 - - - - - out at first homolog [Source:NCBI gene;Acc:395161]
97. ANKRA2 ENSGALG00000013511 3460 0.818 - - - - - - - - - 0.818 ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
98. NFKBIE ENSGALG00000044525 633 0.818 - - - - - - - - - 0.818 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
99. COL12A1 ENSGALG00000015908 1300 0.817 - - - - - - - - - 0.817 collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
100. IMPA2 ENSGALG00000013814 4202 0.816 - - - - - - - - - 0.816 inositol monophosphatase 2 [Source:HGNC Symbol;Acc:HGNC:6051]

There are 379 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA