Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ZFHX3

Gene Name Gene ID Reads Annotation
ZFHX3 ENSDARG00000103057 7759 zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]










Genes with expression patterns similar to ZFHX3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ZFHX3 ENSDARG00000103057 7759 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
2. nova2 ENSDARG00000017673 7685 4.319 0.856 - - 0.764 0.831 0.927 0.941 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
3. si:ch73-21g5.7 ENSDARG00000093156 9412 4.192 0.791 - 0.820 0.753 - 0.879 0.949 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
4. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 4.151 - - 0.757 0.860 - 0.944 0.890 0.700 - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
5. hmgb1b ENSDARG00000030479 10398 4.142 0.718 - 0.813 - 0.790 0.887 0.934 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
6. SPOCK1 ENSDARG00000074644 794 4.088 0.741 - 0.774 - - 0.861 0.929 0.783 - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
7. cspg5a ENSDARG00000069981 1699 4.084 0.848 - 0.776 0.800 - 0.747 0.913 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
8. CABZ01111990.1 CABZ01111990.1 4374 4.077 0.829 - 0.744 - - 0.827 0.941 0.736 -
9. UBE2QL1 ENSDARG00000079276 3474 4.056 0.880 - - 0.702 - 0.853 0.869 0.752 - ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
10. atp1b4 ENSDARG00000053262 1337 3.975 0.707 - 0.773 0.756 - 0.897 0.842 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
11. ctnnd2b ENSDARG00000003779 964 3.89 0.741 - 0.717 - 0.803 0.704 0.925 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
12. AGO1 ENSDARG00000092644 4521 3.619 0.904 - 0.873 - - 0.904 0.938 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
13. slc1a2b ENSDARG00000102453 3136 3.554 0.861 - - - 0.876 0.888 0.929 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
14. gap43 ENSDARG00000099744 4114 3.538 0.868 - - - - 0.952 0.933 0.785 - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
15. scrt2 ENSDARG00000056175 4331 3.534 0.869 - - - 0.878 0.889 0.898 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
16. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 3.502 0.744 - - - - 0.919 0.859 - 0.980 cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
17. plp1a ENSDARG00000103732 3544 3.502 0.839 - - 0.858 - 0.883 0.922 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
18. dpysl3 ENSDARG00000002587 4381 3.501 0.844 - - - 0.794 0.925 0.938 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
19. pcdh1gc5 ENSDARG00000104826 10052 3.484 0.897 - 0.731 - - 0.934 0.922 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
20. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.457 0.855 - 0.837 - - 0.838 0.927 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
21. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 3.445 0.855 - 0.741 - - 0.901 0.948 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
22. msi1 ENSDARG00000010710 2634 3.443 0.801 - 0.778 - - 0.930 0.934 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
23. elavl3 ENSDARG00000014420 8644 3.421 - - - 0.818 - 0.823 0.947 0.833 - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
24. epha4b ENSDARG00000011600 3110 3.419 0.859 - - - - 0.930 0.897 0.733 - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
25. dpysl5a ENSDARG00000011141 1827 3.405 0.795 - 0.816 - - 0.857 0.937 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
26. hpca ENSDARG00000018397, ENSDARG00000110115 3866 3.395 0.891 - - - 0.775 0.798 0.931 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
27. CHL1 CHL1 1553 3.371 0.838 - 0.756 - - 0.904 0.873 - -
28. C7H4orf48 C7H4orf48 1455 3.366 0.819 - - - - 0.893 0.864 0.790 -
29. hnrnpub ENSDARG00000004735 16496 3.366 0.812 - - 0.805 - 0.854 0.895 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
30. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 3.362 0.835 - 0.821 - 0.914 0.792 - - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
31. gnao1a ENSDARG00000016676 8184 3.344 0.871 - 0.721 - 0.796 - 0.956 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
32. amph ENSDARG00000007663 599 3.325 0.859 - - - - 0.823 0.917 0.726 - amphiphysin [Source:ZFIN;Acc:ZDB-GENE-040426-1711]
33. rusc1 ENSDARG00000078125 617 3.323 0.807 - - - - 0.874 0.906 0.736 - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
34. mdkb ENSDARG00000020708 5393 3.308 0.814 - - 0.811 - 0.852 0.831 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
35. tmpob ENSDARG00000022978 8121 3.299 0.842 - 0.807 - - 0.777 0.873 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
36. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 3.292 - - 0.773 - - 0.857 0.936 0.726 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
37. add2 ENSDARG00000074581 1402 3.29 0.717 - - - - 0.926 0.881 0.766 - adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
38. nbeaa ENSDARG00000070080 862 3.286 0.748 - - - - 0.879 0.934 0.725 - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
39. TNRC6C_2 TNRC6C_2 2444 3.274 - 0.766 0.759 - - 0.945 0.804 - -
40. si:ch211-11c15.3 si:ch211-11c15.3 1279 3.269 0.704 - - - - 0.906 0.914 0.745 -
41. C8H1orf106 C8H1orf106 2690 3.269 0.850 - - 0.721 - 0.815 0.883 - -
42. fzd3a ENSDARG00000021664 1958 3.26 0.832 - 0.815 - - 0.704 0.909 - - frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
43. pnoca ENSDARG00000025024 467 3.257 0.800 0.823 - - - 0.789 0.845 - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
44. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 3.256 0.830 - - 0.733 - 0.829 0.864 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
45. lhx5 ENSDARG00000057936 785 3.254 0.815 - - - - 0.827 0.881 0.731 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
46. rtn1b ENSDARG00000021143 1682 3.251 0.769 - - - - 0.876 0.861 0.745 - reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
47. npas3b npas3b 1446 3.248 0.703 - 0.866 - - 0.756 0.923 - -
48. zic1 ENSDARG00000015567 2520 3.24 0.805 - 0.761 - - 0.834 0.840 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
49. adcyap1b ENSDARG00000027740 1539 3.238 0.839 - - - - 0.887 0.804 0.708 - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
50. TUBB8P7_2 TUBB8P7_2 565 3.236 0.726 0.920 - - - 0.703 0.887 - -
51. slc6a1b ENSDARG00000039647 1301 3.227 0.710 0.919 - - - 0.755 0.843 - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
52. cnrip1a ENSDARG00000091683 1491 3.226 0.721 - - - - 0.762 0.942 0.801 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
53. mex3b ENSDARG00000058369 1867 3.225 - - 0.731 0.789 - 0.796 0.909 - - mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
54. Sep-03 Sep-03 1124 3.221 0.728 - 0.781 - - 0.902 0.810 - -
55. gipc1 ENSDARG00000104483 2913 3.213 - - 0.808 0.792 - 0.822 0.791 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
56. fez1 ENSDARG00000023174 701 3.21 0.811 - - - - 0.814 0.851 0.734 - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
57. her4.1 ENSDARG00000056732 1264 3.206 - - 0.717 - - 0.904 0.849 0.736 - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
58. ENDOD1_5 ENDOD1_5 8723 3.203 0.863 - 0.756 0.812 - 0.772 - - -
59. fam60al 2846 3.197 0.770 - 0.770 - - 0.883 0.774 - - family with sequence similarity 60, member A, like
60. appb ENSDARG00000055543, ENSDARG00000109552 4461 3.191 0.702 - - 0.720 - 0.874 0.895 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
61. negr1 ENSDARG00000021607 1051 3.19 0.805 - 0.709 - - 0.836 0.840 - - neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
62. marcksa ENSDARG00000004049 2518 3.19 - - - 0.813 - 0.749 0.815 0.813 - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
63. elavl4 ENSDARG00000045639 998 3.184 0.756 - 0.729 - - 0.788 0.911 - - ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
64. relnl relnl 863 3.168 0.751 - - - - 0.934 0.773 0.710 -
65. lppr3a lppr3a 1294 3.167 - - - 0.759 - 0.879 0.813 0.716 -
66. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 3.162 0.796 - - - - 0.775 0.811 0.780 - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
67. her4.3 ENSDARG00000070770 613 3.16 0.708 - - - 0.810 0.756 0.886 - - hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
68. arnt2 ENSDARG00000103697 5731 3.158 - - 0.760 - - 0.848 0.810 0.740 - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
69. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 3.149 0.815 - - - - 0.726 0.849 0.759 - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
70. scrt1a ENSDARG00000100821 2687 3.142 0.729 - 0.864 - - 0.828 - 0.721 - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
71. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 3.141 - - 0.757 0.815 - - 0.795 0.774 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
72. plagx ENSDARG00000036855 3768 3.139 0.770 - 0.805 0.800 - - 0.764 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
73. dync1i1 ENSDARG00000060948 554 3.13 0.720 - 0.783 - - 0.793 0.834 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
74. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 3.099 - - 0.716 0.792 - 0.760 0.831 - - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
75. isl1 ENSDARG00000004023 981 3.097 0.748 - - - - 0.909 0.722 0.718 - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
76. mta2 ENSDARG00000013031 2932 3.091 - - 0.741 0.742 - - 0.821 0.787 - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
77. rrm1 ENSDARG00000014017 7296 3.044 0.818 - - 0.751 0.755 - 0.720 - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
78. npm1b ENSDARG00000037675 5448 3.043 0.774 - - - 0.723 0.840 - 0.706 - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
79. gas1b ENSDARG00000067984 1748 3.03 0.767 - 0.712 - - 0.760 0.791 - - growth arrest-specific 1b [Source:ZFIN;Acc:ZDB-GENE-050302-79]
80. odz4 odz4 822 3.001 - - 0.835 0.714 - 0.739 0.713 - -
81. ANKRD11 ENSDARG00000051886 10024 2.942 0.719 - 0.777 - - 0.729 0.717 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
82. BSN BSN 463 2.877 0.726 - - - - 0.737 0.706 0.708 -
83. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.76 0.908 - - - - 0.911 0.941 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
84. tuba1c ENSDARG00000055216 8384 2.751 0.868 - - - - 0.944 0.939 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
85. slc1a3a ENSDARG00000104431 9888 2.741 0.891 - - - - 0.933 0.917 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
86. stx1b ENSDARG00000000503 2724 2.728 0.883 - - - - 0.914 0.931 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
87. dla ENSDARG00000010791 9281 2.704 0.841 - - - 0.915 - 0.948 - - deltaA [Source:ZFIN;Acc:ZDB-GENE-980526-29]
88. vgf ENSDARG00000105529 247 2.697 0.841 - - - - 0.931 0.925 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
89. GJD2_1 GJD2_1 3045 2.691 - - - - - 0.811 0.900 - 0.980
90. gfap ENSDARG00000025301 5584 2.685 0.799 - - - - 0.944 0.942 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
91. sh3gl2 sh3gl2 1305 2.682 0.878 - - - - 0.895 0.909 - -
92. ptprna ENSDARG00000058646 1327 2.668 - - 0.851 - - 0.905 0.912 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
93. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.666 - - 0.872 - - 0.921 0.873 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
94. scn8aa ENSDARG00000005775 792 2.661 0.816 - - - - 0.928 0.917 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
95. stmn2a ENSDARG00000033234 2272 2.66 0.850 - - - - 0.875 0.935 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
96. snap25a ENSDARG00000020609 4537 2.656 0.878 - - - - 0.881 0.897 - - synaptosomal-associated protein, 25a [Source:ZFIN;Acc:ZDB-GENE-980526-468]
97. stmn1b ENSDARG00000033655 9491 2.648 0.880 - - - - 0.815 0.953 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
98. tmeff1b ENSDARG00000056740 11253 2.644 - - - 0.787 - 0.925 0.932 - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
99. mir10d-1 mir10d-1 860 2.641 0.770 - - - - 0.932 0.939 - -
100. cdk5r1b ENSDARG00000045087 2075 2.636 0.829 - - - - 0.926 0.881 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]

There are 2658 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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