Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ZC3H4

Gene Name Gene ID Reads Annotation
ZC3H4 ENSDARG00000078355 1888 zinc finger CCCH-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-100330-1]










Genes with expression patterns similar to ZC3H4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ZC3H4 ENSDARG00000078355 1888 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc finger CCCH-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-100330-1]
2. mycla ENSDARG00000006003 1866 2.548 - 0.778 - - - 0.773 - - 0.997 MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
3. mllt10 ENSDARG00000045401 7557 2.44 - - - - - 0.759 0.748 - 0.933 MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:ZFIN;Acc:ZDB-GENE-041114-176]
4. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.367 - 0.756 - - - 0.810 0.801 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
5. cbx1b ENSDARG00000054442 1206 2.337 - - - 0.747 - 0.839 0.751 - - chromobox homolog 1b (HP1 beta homolog Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040625-68]
6. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.265 - - - 0.774 - 0.714 0.777 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
7. smad7 ENSDARG00000016858 1660 1.804 - - - - - 0.864 - - 0.940 SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
8. foxp4 ENSDARG00000076120 9458 1.787 - 0.836 - - - - - - 0.951 forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
9. TTF1_5 TTF1_5 705 1.786 - - - 0.788 - - - - 0.998
10. dcaf6 ENSDARG00000078311 1118 1.765 0.767 - - - - - - - 0.998 ddb1 and cul4 associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-090206-2]
11. cnn3b ENSDARG00000029856 4807 1.762 - - - - - 0.789 - - 0.973 calponin 3, acidic b [Source:ZFIN;Acc:ZDB-GENE-050522-263]
12. smo ENSDARG00000002952 6411 1.754 - - - 0.858 - 0.896 - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
13. gatad2ab ENSDARG00000006192 2461 1.723 - - - 0.922 - - 0.801 - - GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
14. zfr ENSDARG00000027109, ENSDARG00000116459 4171 1.716 - 0.721 - - - - - - 0.995 zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
15. hcfc1b ENSDARG00000012519 3633 1.707 - - - - - 0.720 - - 0.987 host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
16. ZNF337_25 ZNF337_25 1713 1.707 - - - - - 0.709 - - 0.998
17. UBE2QL1 ENSDARG00000079276 3474 1.7 - - - 0.726 - - - - 0.974 ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
18. tlk1b ENSDARG00000100715 1153 1.697 - 0.700 - - - - - - 0.997 tousled-like kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4933]
19. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.687 - - - - - - 0.707 - 0.980 zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
20. meis2b ENSDARG00000077840 5166 1.672 - - - 0.781 - - - - 0.891 Meis homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-000210-23]
21. cand1 ENSDARG00000017841 8164 1.637 - - - - - 0.704 - - 0.933 cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
22. zgc:174863 ENSDARG00000099476, ENSDARG00000116416 411 1.623 0.780 0.843 - - - - - - - zgc:174863 [Source:ZFIN;Acc:ZDB-GENE-080204-87]
23. rnf220a ENSDARG00000060929 693 1.613 - - - 0.815 - - 0.798 - - ring finger protein 220a [Source:ZFIN;Acc:ZDB-GENE-060929-1006]
24. anp32b ENSDARG00000023330 25013 1.61 - - - - - - 0.741 - 0.869 acidic (leucine-rich) nuclear phosphoprotein 32 family, member B [Source:ZFIN;Acc:ZDB-GENE-030131-719]
25. si:dkey-67c22.2 ENSDARG00000055389 6410 1.607 - - - - - 0.900 0.707 - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
26. srrm2 ENSDARG00000037965 1967 1.601 - - - 0.783 - 0.818 - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
27. Mar-05 Mar-05 2391 1.589 - 0.767 - - - 0.822 - - -
28. inip ENSDARG00000028523 1925 1.588 - - - 0.732 - 0.856 - - - ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
29. bahcc1 bahcc1 1934 1.584 - 0.764 - 0.820 - - - - -
30. dcp1a ENSDARG00000100136 714 1.577 - - - 0.792 - 0.785 - - - decapping mRNA 1A [Source:ZFIN;Acc:ZDB-GENE-030723-5]
31. cwc25 ENSDARG00000003382 2134 1.576 - - - 0.778 - 0.798 - - - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
32. gipc1 ENSDARG00000104483 2913 1.574 - - - 0.812 - - 0.762 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
33. tardbp ENSDARG00000040031, ENSDARG00000115667 13815 1.572 - - - 0.807 - - 0.765 - - TAR DNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-3777]
34. gpm6bb ENSDARG00000001676 2005 1.571 - - - 0.839 - 0.732 - - - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
35. cog7 ENSDARG00000061372 789 1.567 - - - - - 0.829 0.738 - - component of oligomeric golgi complex 7 [Source:ZFIN;Acc:ZDB-GENE-061013-463]
36. marcksa ENSDARG00000004049 2518 1.567 - - - 0.836 - - 0.731 - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
37. polr2a ENSDARG00000099966 5706 1.557 - - - - - 0.841 - 0.716 - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
38. hey1 ENSDARG00000070538 986 1.556 - 0.822 - - - - - 0.734 - hes-related family bHLH transcription factor with YRPW motif 1 [Source:ZFIN;Acc:ZDB-GENE-000607-70]
39. plagx ENSDARG00000036855 3768 1.547 - - - 0.833 - - 0.714 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
40. sumo3a ENSDARG00000028119 13447 1.544 - - - - - 0.744 0.800 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
41. fam50a ENSDARG00000024895 3020 1.542 - 0.767 - - - - 0.775 - - family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
42. hoxd3a ENSDARG00000059280 1919 1.537 - 0.750 - - - 0.787 - - - homeobox D3a [Source:ZFIN;Acc:ZDB-GENE-990415-120]
43. slc16a9b ENSDARG00000104687 826 1.537 - 0.778 - - - 0.759 - - - solute carrier family 16, member 9b [Source:ZFIN;Acc:ZDB-GENE-040801-69]
44. prkcbp1l ENSDARG00000011932 2714 1.537 - - - 0.834 - - - 0.703 - protein kinase C binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2199]
45. BX085195.1 BX085195.1 995 1.536 - 0.741 - - - 0.795 - - -
46. gse1 ENSDARG00000062020 2337 1.534 - 0.817 - - - - 0.717 - - Gse1 coiled-coil protein [Source:ZFIN;Acc:ZDB-GENE-030131-9569]
47. elf2b ENSDARG00000079626, ENSDARG00000117064 3057 1.53 - 0.758 - - - 0.772 - - - E74-like factor 2b (ets domain transcription factor) [Source:ZFIN;Acc:ZDB-GENE-031215-1]
48. usp49 ENSDARG00000000229 706 1.528 - 0.706 - 0.822 - - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
49. phf10 ENSDARG00000070084 1210 1.517 - - - 0.783 - 0.734 - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
50. hoxd4a ENSDARG00000059276 1516 1.514 - - - - - 0.756 0.758 - - homeobox D4a [Source:ZFIN;Acc:ZDB-GENE-980526-214]
51. ssbp3b ENSDARG00000030155 7163 1.51 - - - - - 0.742 0.768 - - single stranded DNA binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2801]
52. slc29a2 ENSDARG00000001767, ENSDARG00000115816 439 1.509 - 0.807 - 0.702 - - - - - solute carrier family 29 (equilibrative nucleoside transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-050220-15]
53. qki2 ENSDARG00000010018 2230 1.509 - - - - - 0.775 0.734 - - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
54. ttc14 ENSDARG00000013845 1192 1.503 - - - 0.800 - - 0.703 - - tetratricopeptide repeat domain 14 [Source:ZFIN;Acc:ZDB-GENE-050327-26]
55. nckap5l ENSDARG00000079148 4227 1.499 - 0.737 - - - 0.762 - - - NCK-associated protein 5-like [Source:ZFIN;Acc:ZDB-GENE-090313-304]
56. slc5a3b ENSDARG00000077812 153 1.499 - 0.752 - 0.747 - - - - - solute carrier family 5 (sodium/myo-inositol cotransporter), member 3b [Source:ZFIN;Acc:ZDB-GENE-070912-43]
57. wdhd1 ENSDARG00000015998 775 1.494 - - - 0.768 - - 0.726 - - WD repeat and HMG-box DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1665]
58. PACS1 PACS1 2061 1.494 - 0.738 - - - 0.756 - - -
59. AKAP13_1 ENSDARG00000079994 444 1.491 - 0.726 - 0.765 - - - - - A-kinase anchoring protein 13 [Source:HGNC Symbol;Acc:HGNC:371]
60. bub1bb ENSDARG00000074927 1667 1.49 0.726 - - 0.764 - - - - - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
61. actr1 ENSDARG00000011611 3879 1.489 - 0.755 - - - - 0.734 - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
62. tead1a ENSDARG00000028159 3574 1.486 - 0.761 - - - - 0.725 - - TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
63. nfil3-2 658 1.483 - 0.703 - 0.780 - - - - - nuclear factor, interleukin 3 regulated, member 2, transcript variant X1
64. ZNF281 ZNF281 1946 1.481 - - - 0.707 - - 0.774 - -
65. msl2a ENSDARG00000038909 1357 1.478 - - - - - 0.771 0.707 - - male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
66. CABZ01051991.1 CABZ01051991.1 346 1.478 - - - 0.775 - - 0.703 - -
67. LDLRAD4 LDLRAD4 1237 1.474 - - - 0.759 - - 0.715 - -
68. cnot8 ENSDARG00000020043 866 1.473 - - - 0.722 - - - 0.751 - CCR4-NOT transcription complex, subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2845]
69. CABZ01115322.1 CABZ01115322.1 1283 1.472 - 0.726 - 0.746 - - - - -
70. WDR89 ENSDARG00000077265 322 1.472 - 0.733 - 0.739 - - - - - WD repeat domain 89 [Source:ZFIN;Acc:ZDB-GENE-090319-3]
71. tdg tdg 3269 1.471 - - - 0.715 - 0.756 - - -
72. dgcr2 ENSDARG00000042962, ENSDARG00000109230 2339 1.47 - - - 0.709 - 0.761 - - - DiGeorge syndrome critical region gene 2 [Source:ZFIN;Acc:ZDB-GENE-040718-404]
73. syt3 ENSDARG00000075830 430 1.46 - - - 0.756 - - 0.704 - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
74. ipo9 ENSDARG00000016753, ENSDARG00000113327 936 1.458 - 0.717 - - - - 0.741 - - importin 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2953]
75. ctbp2 ctbp2 3255 1.458 - - - - - 0.730 0.728 - -
76. peli1b ENSDARG00000044083, ENSDARG00000112797 3801 1.454 - - - 0.718 - - 0.736 - - pellino E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-061027-372]
77. CR293507.1 ENSDARG00000112572 3198 1.448 - - - 0.708 - 0.740 - - -
78. suv39h1b ENSDARG00000055753 1540 1.442 - - - 0.738 - 0.704 - - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
79. SERBP1 SERBP1 9276 1.441 - - - - - 0.719 0.722 - -
80. NIPBL NIPBL 871 1.44 0.712 - - 0.728 - - - - -
81. fam118b ENSDARG00000078983 1822 1.431 - 0.719 - - - - 0.712 - - family with sequence similarity 118, member B [Source:ZFIN;Acc:ZDB-GENE-060810-6]
82. BX511086.1 BX511086.1 8308 1.43 - - 0.721 - - 0.709 - - -
83. TAF2 ENSDARG00000102307 1401 1.423 - - - 0.706 - 0.717 - - - TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
84. tmeff1b ENSDARG00000056740 11253 1.421 - - - 0.704 - - 0.717 - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
85. TMEM185A TMEM185A 5505 1.417 - - - 0.702 - 0.715 - - -
86. atf7ip ENSDARG00000069619 5495 1.417 - - - - - 0.715 0.702 - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
87. mier1a ENSDARG00000041072 1690 1.411 - 0.706 - 0.705 - - - - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
88. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 1.409 - - - 0.709 - - - 0.700 - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
89. GTF3C1 GTF3C1 836 0.998 - - - - - - - - 0.998
90. tmbim4 ENSDARG00000014361 2549 0.998 - - - - - - - - 0.998 transmembrane BAX inhibitor motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2152]
91. ppargc1b ENSDARG00000101569 3452 0.998 - - - - - - - - 0.998 peroxisome proliferator-activated receptor gamma, coactivator 1 beta [Source:ZFIN;Acc:ZDB-GENE-030616-43]
92. rcbtb2 ENSDARG00000090687 1658 0.998 - - - - - - - - 0.998 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 [Source:ZFIN;Acc:ZDB-GENE-071016-3]
93. tarbp2 ENSDARG00000070471 1946 0.998 - - - - - - - - 0.998 TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
94. nbr1 nbr1 1161 0.998 - - - - - - - - 0.998
95. cap1 ENSDARG00000016350 891 0.998 - - - - - - - - 0.998 CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
96. rgs19 ENSDARG00000077385 783 0.998 - - - - - - - - 0.998 regulator of G protein signaling 19 [Source:ZFIN;Acc:ZDB-GENE-080723-72]
97. rfx5 ENSDARG00000063258 806 0.998 - - - - - - - - 0.998 regulatory factor X, 5 [Source:ZFIN;Acc:ZDB-GENE-070717-3]
98. BCL6B ENSDARG00000069335 602 0.998 - - - - - - - - 0.998 B-cell CLL/lymphoma 6, member B [Source:ZFIN;Acc:ZDB-GENE-120907-1]
99. WIZ WIZ 1188 0.998 - - - - - - - - 0.998
100. PRKAR2B ENSDARG00000036446 812 0.998 - - - - - - - - 0.998 protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]

There are 1201 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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