Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ZC3H3

Gene Name Gene ID Reads Annotation
ZC3H3 ENSGALG00000043265 1638 zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]











Genes with expression patterns similar to ZC3H3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ZC3H3 ENSGALG00000043265 1638 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
2. SMIM12 ENSGALG00000030261 5860 1.73 - - - - - - 0.768 0.962 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
3. MED28 ENSGALG00000007138 7686 1.581 - - - - - - 0.775 0.806 - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
4. TFEB ENSGALG00000039878 881 0.989 - - - - - - - 0.989 - - transcription factor EB [Source:NCBI gene;Acc:419922]
5. SMARCC1 ENSGALG00000032642 4842 0.988 - - - - - - - 0.988 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
6. ABCA3 ENSGALG00000037837 1606 0.987 - - - - - - - 0.987 - - ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
7. APOOL ENSGALG00000006978 1953 0.987 - - - - - - - 0.987 - - apolipoprotein O like [Source:NCBI gene;Acc:422271]
8. ADIPOR1 ENSGALG00000000094 1862 0.987 - - - - - - - 0.987 - - adiponectin receptor 1 [Source:NCBI gene;Acc:421148]
9. GTDC1 ENSGALG00000012424 1446 0.986 - - - - - - - 0.986 - - glycosyltransferase like domain containing 1 [Source:NCBI gene;Acc:424304]
10. INOS INOS 313 0.986 - - - - - - - 0.986 - -
11. REXO1 ENSGALG00000001043 3179 0.985 - - - - - - - 0.985 - - RNA exonuclease 1 homolog [Source:HGNC Symbol;Acc:HGNC:24616]
12. TMEM59 ENSGALG00000010746 4669 0.985 - - - - - - - 0.985 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
13. MYH15 ENSGALG00000015358 6304 0.985 - - - - - - - 0.985 - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
14. NEMF ENSGALG00000012263 2250 0.985 - - - - - - - 0.985 - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
15. FIGN ENSGALG00000011069 311 0.984 - - - - - - - 0.984 - - fidgetin, microtubule severing factor [Source:HGNC Symbol;Acc:HGNC:13285]
16. C7orf25 ENSGALG00000040161 694 0.984 - - - - - - - 0.984 - - chromosome 7 open reading frame 25 [Source:HGNC Symbol;Acc:HGNC:21703]
17. NGEF ENSGALG00000036327 1048 0.984 - - - - - - - 0.984 - - neuronal guanine nucleotide exchange factor [Source:NCBI gene;Acc:424744]
18. ATP8B4 ENSGALG00000002326 456 0.984 - - - - - - - 0.984 - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
19. RGS17 ENSGALG00000026034 707 0.984 - - - - - - - 0.984 - - regulator of G protein signaling 17 [Source:NCBI gene;Acc:395645]
20. gga-mir-1772 ENSGALG00000025300 2892 0.984 - - - - - - - 0.984 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
21. PKP4 ENSGALG00000012561 3087 0.984 - - - - - - - 0.984 - - plakophilin 4 [Source:NCBI gene;Acc:424328]
22. REV3L ENSGALG00000015033 1917 0.984 - - - - - - - 0.984 - - REV3 like, DNA directed polymerase zeta catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9968]
23. TRPC6 ENSGALG00000029416 281 0.983 - - - - - - - 0.983 - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
24. RP9 ENSGALG00000035453 1186 0.983 - - - - - - - 0.983 - - retinitis pigmentosa 9 (autosomal dominant)
25. ALG9 ENSGALG00000021174 745 0.983 - - - - - - - 0.983 - - ALG9, alpha-1,2-mannosyltransferase, transcript variant X5
26. H3-I H3-I 1498 0.983 - - - - - - - 0.983 - -
27. ARRDC4 ENSGALG00000007012 1039 0.983 - - - - - - - 0.983 - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
28. HDGFL2 ENSGALG00000027068 1300 0.983 - - - - - - - 0.983 - - HDGF like 2 [Source:NCBI gene;Acc:772302]
29. NSRP1 ENSGALG00000004186 1683 0.983 - - - - - - - 0.983 - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
30. ITGA9 ENSGALG00000029378 415 0.983 - - - - - - - 0.983 - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
31. C5orf24 ENSGALG00000006371 1573 0.983 - - - - - - - 0.983 - - chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
32. PNISR ENSGALG00000015483 7711 0.982 - - - - - - - 0.982 - - PNN interacting serine and arginine rich protein [Source:NCBI gene;Acc:421796]
33. EDEM1 ENSGALG00000008320 3117 0.982 - - - - - - - 0.982 - - ER degradation enhancing alpha-mannosidase like protein 1 [Source:NCBI gene;Acc:416110]
34. CC2D2A ENSGALG00000014514 1180 0.982 - - - - - - - 0.982 - - coiled-coil and C2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29253]
35. CARS2 ENSGALG00000016847 3814 0.982 - - - - - - - 0.982 - - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
36. PHLPP1 ENSGALG00000012888 398 0.982 - - - - - - - 0.982 - - PH domain and leucine rich repeat protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:20610]
37. FGF18 ENSGALG00000002203 551 0.982 - - - - - - - 0.982 - - fibroblast growth factor 18 [Source:NCBI gene;Acc:395453]
38. ARHGEF4 ENSGALG00000002193 558 0.982 - - - - - - - 0.982 - - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
39. TRMT44 ENSGALG00000015594 1490 0.982 - - - - - - - 0.982 - - tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
40. RGS9 ENSGALG00000029610 112 0.982 - - - - - - - 0.982 - - regulator of G protein signaling 9 [Source:HGNC Symbol;Acc:HGNC:10004]
41. STX18 ENSGALG00000015012 1489 0.981 - - - - - - - 0.981 - - syntaxin 18 [Source:NCBI gene;Acc:422848]
42. DNAJA1 ENSGALG00000023066 3820 0.981 - - - - - - - 0.981 - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
43. CHAF1A ENSGALG00000001126 6506 0.98 - - - - - - - 0.980 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
44. IRX1 ENSGALG00000030991 1474 0.98 - - - - - - - 0.980 - - iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
45. NR2F2 ENSGALG00000007000 4911 0.98 - - - - - - - 0.980 - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
46. DCTN5 ENSGALG00000006088 3113 0.98 - - - - - - - 0.980 - - dynactin subunit 5 [Source:NCBI gene;Acc:416574]
47. GOLGB1 ENSGALG00000041494 2376 0.98 - - - - - - - 0.980 - - golgin B1 [Source:HGNC Symbol;Acc:HGNC:4429]
48. NET1 ENSGALG00000008437 9850 0.98 - - - - - - - 0.980 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
49. DEPDC7 ENSGALG00000011681 1181 0.979 - - - - - - - 0.979 - - DEP domain containing 7 [Source:NCBI gene;Acc:421593]
50. TMEM57 ENSGALG00000001067 3367 0.979 - - - - - - - 0.979 - - transmembrane protein 57 [Source:NCBI gene;Acc:419590]
51. AMMECR1L ENSGALG00000026728 2134 0.977 - - - - - - - 0.977 - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
52. PYCR1 ENSGALG00000007300 7987 0.977 - - - - - - - 0.977 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
53. BRCC3 ENSGALG00000005383 4844 0.977 - - - - - - - 0.977 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
54. BTG1L ENSGALG00000004676 2293 0.976 - - - - - - - 0.976 - - protein BTG1-like
55. METTL22 ENSGALG00000033603 696 0.976 - - - - - - - 0.976 - - methyltransferase like 22 [Source:NCBI gene;Acc:425865]
56. MTMR9 ENSGALG00000016649 2055 0.976 - - - - - - - 0.976 - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
57. UCK2 ENSGALG00000003510 2512 0.976 - - - - - - - 0.976 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
58. SRP72 ENSGALG00000011403 13666 0.974 - - - - - - - 0.974 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
59. TXNDC5 ENSGALG00000012784 4678 0.972 - - - - - - - 0.972 - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
60. RNF214 ENSGALG00000036993 3729 0.972 - - - - - - - 0.972 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
61. SLC25A1 ENSGALG00000041760 4744 0.972 - - - - - - - 0.972 - - solute carrier family 25 member 1, transcript variant X2
62. TUBAL3 ENSGALG00000008444 2979 0.971 - - - - - - - 0.971 - - tubulin alpha like 3 [Source:NCBI gene;Acc:416694]
63. PEO1 PEO1 6747 0.971 - - - - - - - 0.971 - -
64. CCDC61 ENSGALG00000006714 8066 0.97 - - - - - - - 0.970 - - coiled-coil domain containing 61 [Source:NCBI gene;Acc:424880]
65. TRIM24 ENSGALG00000012823 2725 0.97 - - - - - - - 0.970 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
66. GLG1 ENSGALG00000039818 6221 0.968 - - - - - - - 0.968 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
67. DUSP14 ENSGALG00000027641 3662 0.968 - - - - - - - 0.968 - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
68. gga-mir-1306 ENSGALG00000025271 1231 0.968 - - - - - - - 0.968 - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
69. ENSGALG00000014190 ENSGALG00000014190 5735 0.968 - - - - - - - 0.968 - -
70. KDM4A ENSGALG00000010074 7219 0.967 - - - - - - - 0.967 - - lysine demethylase 4A
71. ACSL1 ENSGALG00000010628 2560 0.966 - - - - - - - 0.966 - - acyl-CoA synthetase long chain family member 1 [Source:NCBI gene;Acc:422547]
72. UBAC2 ENSGALG00000016880 1343 0.965 - - - - - - - 0.965 - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
73. MAST2 ENSGALG00000010313 2975 0.962 - - - - - - - 0.962 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
74. KHDRBS1 ENSGALG00000003272 4249 0.962 - - - - - - - 0.962 - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
75. USP32 ENSGALG00000005350 1686 0.962 - - - - - - - 0.962 - - ubiquitin specific peptidase 32, transcript variant X2
76. TCEA1 ENSGALG00000015274 2706 0.962 - - - - - - - 0.962 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
77. DMB2 ENSGALG00000038393 1257 0.961 - - - - - - - 0.961 - - major histocompatibility complex, class II, DM beta 2 [Source:NCBI gene;Acc:417051]
78. ARFRP1 ENSGALG00000006101 3743 0.96 - - - - - - - 0.960 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
79. NUP210L 370 0.959 - - - - - - - 0.959 - - nucleoporin 210 like
80. SMC6 ENSGALG00000016467 3321 0.959 - - - - - - - 0.959 - - Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
81. LIG3 ENSGALG00000002288 7198 0.958 - - - - - - - 0.958 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
82. EFHD1 ENSGALG00000001428 2831 0.958 - - - - - - - 0.958 - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
83. WASH1 WASH1 3240 0.957 - - - - - - - 0.957 - -
84. MTERFD1 MTERFD1 3640 0.956 - - - - - - - 0.956 - -
85. PPCS ENSGALG00000004882 5759 0.955 - - - - - - - 0.955 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
86. LATS2 4776 0.954 - - - - - - - 0.954 - - large tumor suppressor kinase 2
87. BAZ1B ENSGALG00000029408 5921 0.954 - - - - - - - 0.954 - - bromodomain adjacent to zinc finger domain 1B [Source:HGNC Symbol;Acc:HGNC:961]
88. VGLL4 ENSGALG00000004937 3762 0.953 - - - - - - - 0.953 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
89. FGFR1OP ENSGALG00000011423 2418 0.953 - - - - - - - 0.953 - - FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]
90. CHMP6 ENSGALG00000026428 18026 0.952 - - - - - - - 0.952 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
91. ATG4C ENSGALG00000010985 6102 0.949 - - - - - - - 0.949 - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
92. FBXO33 ENSGALG00000010192 2917 0.945 - - - - - - - 0.945 - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
93. CEP170 ENSGALG00000010733 4177 0.944 - - - - - - - 0.944 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
94. SNAP29 ENSGALG00000040128 3581 0.944 - - - - - - - 0.944 - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
95. BCLAF1 ENSGALG00000013935 7596 0.943 - - - - - - - 0.943 - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
96. PIGK ENSGALG00000009015 7942 0.942 - - - - - - - 0.942 - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
97. CENPH ENSGALG00000014788 10601 0.94 - - - - - - - 0.940 - - centromere protein H [Source:NCBI gene;Acc:395316]
98. RNF144A ENSGALG00000028709 2855 0.936 - - - - - - - 0.936 - - ring finger protein 144A, transcript variant X1
99. KCNB1 ENSGALG00000004758 620 0.935 - - - - - - - 0.935 - - potassium voltage-gated channel subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:6231]
100. ENSGALG00000003150 ENSGALG00000003150 10001 0.934 - - - - - - - 0.934 - -

There are 259 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA