Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ZC3H18

Gene Name Gene ID Reads Annotation
ZC3H18 2569 zinc finger CCCH-type containing 18, transcript variant X3











Genes with expression patterns similar to ZC3H18

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ZC3H18 2569 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc finger CCCH-type containing 18, transcript variant X3
2. GBE1 ENSGALG00000042771 2323 1.649 - - 0.906 - - - 0.743 - - - 1,4-alpha-glucan branching enzyme 1 [Source:HGNC Symbol;Acc:HGNC:4180]
3. RAB34 ENSGALG00000026315 1193 1.592 - - 0.882 - - - - - - 0.710 RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
4. MKRN1 ENSGALG00000012852 6907 1.54 - - 0.701 - - - - 0.839 - - makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
5. PRKACB ENSGALG00000028530 12506 1.538 - - 0.782 - - - - 0.756 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
6. PHF14 ENSGALG00000038041 13687 1.458 - - - - - - - 0.710 - 0.748 PHD finger protein 14 [Source:NCBI gene;Acc:420583]
7. TRIM24 ENSGALG00000012823 2725 1.444 - - - - - - 0.726 - - 0.718 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
8. SPEN ENSGALG00000036932 9688 1.444 - - - - - - 0.722 - - 0.722 spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
9. HEATR6 ENSGALG00000005516 3347 1.437 - - - - - - 0.736 - - 0.701 HEAT repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:24076]
10. QTRTD1 QTRTD1 10765 1.428 - - 0.720 - - - - 0.708 - -
11. IFRD1 ENSGALG00000009448 8865 1.419 - - - - - - 0.717 0.702 - - interferon related developmental regulator 1 [Source:NCBI gene;Acc:395226]
12. FAM171B ENSGALG00000002646 837 0.944 - - 0.944 - - - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
13. SOAT1 ENSGALG00000004205 2394 0.938 - - 0.938 - - - - - - - sterol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:11177]
14. ANXA8 ENSGALG00000005956 479 0.93 - - 0.930 - - - - - - - annexin A8, transcript variant X1
15. SLC9A3R2 ENSGALG00000005608 4220 0.925 - - 0.925 - - - - - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
16. CYP27A1 ENSGALG00000002470 321 0.923 - - 0.923 - - - - - - - cytochrome P450 family 27 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2605]
17. RAB10 ENSGALG00000016535 5272 0.922 - - 0.922 - - - - - - - RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
18. YWHAQ ENSGALG00000016433 3450 0.92 - - 0.920 - - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta [Source:NCBI gene;Acc:421932]
19. FAM188B 2097 0.915 - - 0.915 - - - - - - - family with sequence similarity 188 member B
20. GTF2IRD1 ENSGALG00000001263 14716 0.906 - - 0.906 - - - - - - - GTF2I repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:4661]
21. ENSGALG00000028164 ENSGALG00000028164 3325 0.9 - - 0.900 - - - - - - -
22. BRCC3 ENSGALG00000005383 4844 0.899 - - 0.899 - - - - - - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
23. FAT1 ENSGALG00000013579 6030 0.891 - - 0.891 - - - - - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
24. CRCP ENSGALG00000002587 8809 0.891 - - 0.891 - - - - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
25. MAN2B2 ENSGALG00000015537 2267 0.886 - - 0.886 - - - - - - - mannosidase alpha class 2B member 2 [Source:HGNC Symbol;Acc:HGNC:29623]
26. EMILIN2 ENSGALG00000032997 2460 0.884 - - 0.884 - - - - - - - elastin microfibril interfacer 2 [Source:HGNC Symbol;Acc:HGNC:19881]
27. MYO5A ENSGALG00000031987 2469 0.882 - - 0.882 - - - - - - - myosin VA [Source:NCBI gene;Acc:396237]
28. ZCCHC10 ENSGALG00000036666 5148 0.871 - - 0.871 - - - - - - - zinc finger CCHC-type containing 10 [Source:HGNC Symbol;Acc:HGNC:25954]
29. RAD51AP1 ENSGALG00000017290 3807 0.871 - - 0.871 - - - - - - - RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]
30. MRPS34 ENSGALG00000001792 14262 0.868 - - 0.868 - - - - - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
31. GTF2A1 ENSGALG00000010576 4570 0.868 - - 0.868 - - - - - - - general transcription factor IIA subunit 1 [Source:NCBI gene;Acc:423389]
32. NXT2 ENSGALG00000008092 2477 0.866 - - 0.866 - - - - - - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
33. SLC25A4 ENSGALG00000010614 9970 0.863 - - 0.863 - - - - - - - solute carrier family 25 member 4 [Source:NCBI gene;Acc:422546]
34. THOC2 ENSGALG00000008507 9501 0.858 - - 0.858 - - - - - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
35. ACBD6 ACBD6 4293 0.856 - - 0.856 - - - - - - -
36. PPT1 ENSGALG00000003936 2540 0.855 - - 0.855 - - - - - - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
37. MAP4K3 ENSGALG00000039720 5124 0.854 - - 0.854 - - - - - - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
38. ADIPOR2 ENSGALG00000035533 6523 0.854 - - 0.854 - - - - - - - adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
39. SDAD1 ENSGALG00000011543 5191 0.854 - - 0.854 - - - - - - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
40. KPNA2 ENSGALG00000003584 76058 0.852 - - 0.852 - - - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
41. TMEM41B ENSGALG00000005815 2049 0.845 - - 0.845 - - - - - - - transmembrane protein 41B [Source:NCBI gene;Acc:423047]
42. CKB ENSGALG00000011511 2100 0.836 - - 0.836 - - - - - - - creatine kinase B [Source:NCBI gene;Acc:396248]
43. ENSGALG00000012158 ENSGALG00000012158 11937 0.832 - - 0.832 - - - - - - -
44. ST5 6869 0.825 - - 0.825 - - - - - - - suppression of tumorigenicity 5, transcript variant X1
45. WTAP ENSGALG00000011660 10811 0.824 - - 0.824 - - - - - - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
46. CTSA ENSGALG00000006876 5380 0.823 - - 0.823 - - - - - - - cathepsin A [Source:NCBI gene;Acc:428163]
47. ENSGALG00000001861 ENSGALG00000001861 10150 0.823 - - 0.823 - - - - - - -
48. GHITM ENSGALG00000021262 7159 0.822 - - 0.822 - - - - - - - growth hormone inducible transmembrane protein [Source:NCBI gene;Acc:423621]
49. IDH1 ENSGALG00000008818 17613 0.821 - - 0.821 - - - - - - - isocitrate dehydrogenase (NADP(+)) 1, cytosolic [Source:HGNC Symbol;Acc:HGNC:5382]
50. SETD1B ENSGALG00000004324 2897 0.82 - - 0.820 - - - - - - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
51. MRPS35 ENSGALG00000036730 6327 0.82 - - 0.820 - - - - - - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
52. GCAT ENSGALG00000012312 7906 0.818 - - - - - - - 0.818 - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
53. DHFR ENSGALG00000026757 18478 0.815 - - 0.815 - - - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
54. CREB3L2 ENSGALG00000012877 2515 0.813 - - 0.813 - - - - - - - cAMP responsive element binding protein 3 like 2 [Source:HGNC Symbol;Acc:HGNC:23720]
55. MAP1B ENSGALG00000014999 6288 0.81 - - 0.810 - - - - - - - microtubule associated protein 1B
56. SENP6 ENSGALG00000015901 8013 0.809 - - 0.809 - - - - - - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
57. ENSGALG00000004032 ENSGALG00000004032 2010 0.807 - - 0.807 - - - - - - -
58. OTUD6B ENSGALG00000041337 15657 0.803 - - 0.803 - - - - - - - OTU domain containing 6B [Source:NCBI gene;Acc:420222]
59. YBX1 ENSGALG00000004848 20992 0.803 - - 0.803 - - - - - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
60. HDHD2 ENSGALG00000034801 6373 0.802 - - 0.802 - - - - - - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
61. CTBPL ENSGALG00000007642 14238 0.802 - - 0.802 - - - - - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
62. VMA21 ENSGALG00000009065 6432 0.802 - - 0.802 - - - - - - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
63. UQCRC1 ENSGALG00000005789 23201 0.802 - - 0.802 - - - - - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
64. CAT ENSGALG00000030187 7534 0.801 - - 0.801 - - - - - - - catalase [Source:NCBI gene;Acc:423600]
65. NFI1 NFI1 6210 0.801 - - 0.801 - - - - - - -
66. CDC34 ENSGALG00000024332 4562 0.801 - - - - - - 0.801 - - - cell division cycle 34 [Source:HGNC Symbol;Acc:HGNC:1734]
67. CTBP1 ENSGALG00000039942 9383 0.8 - - 0.800 - - - - - - - C-terminal binding protein 1 [Source:NCBI gene;Acc:422904]
68. RAD18 ENSGALG00000008368 7214 0.798 - - 0.798 - - - - - - - RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
69. MRPS36 ENSGALG00000014789 7584 0.794 - - 0.794 - - - - - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
70. NAIF1 ENSGALG00000027734 1551 0.794 - - - - - - 0.794 - - - nuclear apoptosis inducing factor 1 [Source:NCBI gene;Acc:417229]
71. GNPAT ENSGALG00000011163 4286 0.791 - - - - - - - - - 0.791 glyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]
72. FN3KRP ENSGALG00000028979 4160 0.791 - - - - - - - 0.791 - - fructosamine 3 kinase related protein [Source:NCBI gene;Acc:417336]
73. REST 2394 0.79 - - 0.790 - - - - - - - RE1 silencing transcription factor
74. MAEA ENSGALG00000013310 13230 0.79 - - 0.790 - - - - - - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
75. STRN3 ENSGALG00000040464 9045 0.789 - - 0.789 - - - - - - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
76. RANBP3 ENSGALG00000000577 8856 0.789 - - 0.789 - - - - - - - RAN binding protein 3 [Source:HGNC Symbol;Acc:HGNC:9850]
77. ERLIN2 ENSGALG00000003092 18251 0.788 - - - - - - - 0.788 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
78. EIF4G3 ENSGALG00000010084 5881 0.787 - - 0.787 - - - - - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
79. BRMS1L ENSGALG00000010093 4964 0.787 - - - - - - 0.787 - - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
80. CTCF 10811 0.786 - - - - - - - - - 0.786 CCCTC-binding factor, transcript variant X2
81. NHP2L1 NHP2L1 12124 0.786 - - 0.786 - - - - - - -
82. CDT1 ENSGALG00000013784 6801 0.784 - - 0.784 - - - - - - - chromatin licensing and DNA replication factor 1 [Source:HGNC Symbol;Acc:HGNC:24576]
83. COBRA1 COBRA1 4600 0.784 - - - - - - - 0.784 - -
84. CACNA2D2 ENSGALG00000038242 2078 0.783 - - - - - - - - - 0.783 calcium voltage-gated channel auxiliary subunit alpha2delta 2 [Source:HGNC Symbol;Acc:HGNC:1400]
85. SMC4 ENSGALG00000009553 15715 0.781 - - 0.781 - - - - - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
86. STK3 ENSGALG00000032850 6339 0.781 - - 0.781 - - - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
87. PDDC1 5179 0.781 - - - - - - 0.781 - - - Parkinson disease 7 domain containing 1, transcript variant X6
88. RNF220 ENSGALG00000010109 3114 0.779 - - - - - - - - - 0.779 ring finger protein 220 [Source:NCBI gene;Acc:424580]
89. BMS1 ENSGALG00000002624 8339 0.778 - - 0.778 - - - - - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
90. DCAF12 ENSGALG00000005800 6419 0.776 - - 0.776 - - - - - - - DDB1 and CUL4 associated factor 12 [Source:NCBI gene;Acc:427396]
91. GALM ENSGALG00000013828 1546 0.775 - - - - - - - 0.775 - - galactose mutarotase [Source:HGNC Symbol;Acc:HGNC:24063]
92. HIC1 ENSGALG00000042077 5827 0.774 - - - - - - - - - 0.774 HIC ZBTB transcriptional repressor 1 [Source:NCBI gene;Acc:396164]
93. KDM6A ENSGALG00000016217 2302 0.774 - - - - - - - - - 0.774 lysine demethylase 6A, transcript variant X14
94. C1D ENSGALG00000008765 14779 0.774 - - 0.774 - - - - - - - C1D nuclear receptor corepressor [Source:NCBI gene;Acc:421267]
95. ARHGAP19 ENSGALG00000007609 3655 0.773 - - - - - - - - - 0.773 Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
96. RIT1 ENSGALG00000014647 7174 0.773 - - - - - - - 0.773 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
97. ANKRA2 ENSGALG00000013511 3460 0.772 - - - - - - - - - 0.772 ankyrin repeat family A member 2 [Source:NCBI gene;Acc:426153]
98. MRPS18A ENSGALG00000010296 11039 0.771 - - 0.771 - - - - - - - mitochondrial ribosomal protein S18A [Source:NCBI gene;Acc:421445]
99. TCN2 3959 0.771 - - - - - - - - - 0.771 transcobalamin 2
100. UTRN ENSGALG00000012256 9980 0.77 - - 0.770 - - - - - - - utrophin [Source:HGNC Symbol;Acc:HGNC:12635]

There are 343 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA