Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ZC3H13

Gene Name Gene ID Reads Annotation
ZC3H13 ENSGALG00000016984 21043 zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:HGNC:20368]











Genes with expression patterns similar to ZC3H13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ZC3H13 ENSGALG00000016984 21043 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:HGNC:20368]
2. UBE2V1 ENSGALG00000008015 17947 2.293 - - 0.801 - - - 0.751 0.741 - - ubiquitin conjugating enzyme E2 V1 [Source:NCBI gene;Acc:100538349]
3. CUL4B ENSGALG00000008559 16864 1.587 - - - - - - 0.868 0.719 - - cullin 4B [Source:HGNC Symbol;Acc:HGNC:2555]
4. PCNP ENSGALG00000015330 15750 1.586 - - - - - - 0.802 0.784 - - PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
5. TXNDC12 ENSGALG00000010569 13822 1.572 - - 0.830 - - - 0.742 - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
6. STRN3 ENSGALG00000040464 9045 1.559 - - 0.840 - - - 0.719 - - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
7. NDUFAF2 ENSGALG00000027564 7302 1.519 - - 0.741 - - - 0.778 - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
8. PHF21A ENSGALG00000008403 3090 1.516 - - 0.751 - - - 0.765 - - - PHD finger protein 21A [Source:NCBI gene;Acc:423199]
9. API5 ENSGALG00000037968 18265 1.508 - - 0.749 - - - 0.759 - - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
10. HOXA9 ENSGALG00000028983 9298 1.504 - - - - - - 0.796 0.708 - - homeobox A9 [Source:NCBI gene;Acc:396096]
11. MRPL46 ENSGALG00000006782 5033 1.494 - - 0.770 - - - 0.724 - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
12. C1orf174 ENSGALG00000000975 4947 1.47 - - 0.739 - - - 0.731 - - - chromosome 1 open reading frame 174 [Source:HGNC Symbol;Acc:HGNC:27915]
13. KIAA0196 KIAA0196 4011 1.47 - - 0.758 - - - 0.712 - - -
14. KDELR2 ENSGALG00000040793 29669 1.47 - - - - - - 0.712 0.758 - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
15. ANKRD11 ENSGALG00000006222 12327 1.437 - - 0.734 - - - 0.703 - - - ankyrin repeat domain 11, transcript variant X2
16. PTPN11 ENSGALG00000004821 2658 1.433 - - 0.719 - - - 0.714 - - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
17. RRP1B ENSGALG00000035696 12309 1.432 - - 0.724 - - - 0.708 - - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
18. CEP78 ENSGALG00000015179 5227 1.421 - - - - - - 0.706 0.715 - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
19. PDCD4 ENSGALG00000008700 574 0.935 - - 0.935 - - - - - - - programmed cell death 4 [Source:NCBI gene;Acc:374191]
20. ENTPD5 ENSGALG00000010202 69 0.921 - - 0.921 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
21. PTPN5 ENSGALG00000006368 440 0.921 - - 0.921 - - - - - - - protein tyrosine phosphatase, non-receptor type 5 [Source:HGNC Symbol;Acc:HGNC:9657]
22. DLX5 ENSGALG00000009129 1395 0.921 - - 0.921 - - - - - - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
23. C8H1ORF52 C8H1ORF52 118 0.918 - - 0.918 - - - - - - -
24. WBSCR17 581 0.918 - - 0.918 - - - - - - - Williams-Beuren syndrome chromosome region 17, transcript variant X1
25. TRANK1 ENSGALG00000037629 2268 0.917 - - 0.917 - - - - - - - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
26. PCMTD2 ENSGALG00000005901 1833 0.916 - - 0.916 - - - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
27. NLGN1 ENSGALG00000040938 651 0.914 - - 0.914 - - - - - - - neuroligin 1 [Source:NCBI gene;Acc:424980]
28. C-MET C-MET 1650 0.914 - - 0.914 - - - - - - -
29. SNX2 ENSGALG00000005337 590 0.913 - - 0.913 - - - - - - - sorting nexin 2 [Source:NCBI gene;Acc:426797]
30. TMEM200C ENSGALG00000030210 1434 0.912 - - 0.912 - - - - - - - transmembrane protein 200C [Source:HGNC Symbol;Acc:HGNC:37208]
31. PVALB1 PVALB1 267 0.911 - - 0.911 - - - - - - -
32. BARX2B BARX2B 1983 0.909 - - 0.909 - - - - - - -
33. TRIM45 ENSGALG00000014818 1258 0.908 - - 0.908 - - - - - - - tripartite motif containing 45 [Source:HGNC Symbol;Acc:HGNC:19018]
34. ATP2B4 ENSGALG00000003601 3746 0.906 - - 0.906 - - - - - - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
35. ENSGALG00000023180 ENSGALG00000023180 83 0.905 - - 0.905 - - - - - - -
36. RHOC ENSGALG00000001569 53 0.905 - - 0.905 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
37. MGMT ENSGALG00000042949 53 0.905 - - 0.905 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
38. POMC ENSGALG00000016600 99 0.905 - - 0.905 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
39. ADAMTS2 ENSGALG00000032974 141 0.904 - - 0.904 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
40. C19H17ORF85 C19H17ORF85 2538 0.904 - - 0.904 - - - - - - -
41. PLEKHG5 ENSGALG00000027476 42 0.904 - - 0.904 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
42. KIAA0195 KIAA0195 48 0.903 - - 0.903 - - - - - - -
43. GRIK3 ENSGALG00000002098 111 0.902 - - 0.902 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
44. SYNCRIP ENSGALG00000015830 30555 0.901 - - 0.901 - - - - - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
45. GOLGA2 ENSGALG00000004881 677 0.901 - - 0.901 - - - - - - - golgin A2, transcript variant X7
46. AURKAIP1 ENSGALG00000001555 14715 0.901 - - - - - - - 0.901 - - aurora kinase A interacting protein 1 [Source:NCBI gene;Acc:419415]
47. MT1 MT1 218 0.9 - - 0.900 - - - - - - -
48. TMEM38B ENSGALG00000027472 2465 0.899 - - 0.899 - - - - - - - transmembrane protein 38B [Source:HGNC Symbol;Acc:HGNC:25535]
49. ETV4 ENSGALG00000036678 2424 0.897 - - 0.897 - - - - - - - ETS variant 4 [Source:HGNC Symbol;Acc:HGNC:3493]
50. SCPEP1 ENSGALG00000003185 2322 0.897 - - 0.897 - - - - - - - serine carboxypeptidase 1 [Source:NCBI gene;Acc:417403]
51. DAPK3 ENSGALG00000037733 6215 0.896 - - 0.896 - - - - - - - death-associated protein kinase 3, transcript variant X2
52. FBXO34 ENSGALG00000032563 656 0.895 - - 0.895 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
53. WDR60 1631 0.894 - - 0.894 - - - - - - - WD repeat domain 60, transcript variant X4
54. LGALS3 ENSGALG00000012173 3306 0.893 - - 0.893 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
55. ZNF423 ENSGALG00000003891 103 0.892 - - 0.892 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
56. ZEB2 ENSGALG00000040465 315 0.891 - - 0.891 - - - - - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
57. Sep-02 Sep-02 206 0.891 - - 0.891 - - - - - - -
58. CASP9 ENSGALG00000001366 1356 0.891 - - 0.891 - - - - - - - caspase 9 [Source:HGNC Symbol;Acc:HGNC:1511]
59. AP3M1 ENSGALG00000005070 712 0.891 - - 0.891 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
60. TMEM97 ENSGALG00000005702 2037 0.889 - - 0.889 - - - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
61. KIF20A ENSGALG00000035030 10249 0.887 - - - - - - - 0.887 - - kinesin family member 20A [Source:NCBI gene;Acc:416220]
62. YLPM1 671 0.886 - - 0.886 - - - - - - - YLP motif containing 1
63. ATP2B2 ENSGALG00000030908 584 0.886 - - 0.886 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
64. SDCBP ENSGALG00000015436 1228 0.885 - - 0.885 - - - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
65. LHFP 167 0.885 - - 0.885 - - - - - - - lipoma HMGIC fusion partner
66. DDX18 ENSGALG00000012147 12463 0.884 - - 0.884 - - - - - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
67. IP6K1 ENSGALG00000002510 827 0.884 - - 0.884 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
68. TSEN2 ENSGALG00000004981 1929 0.884 - - 0.884 - - - - - - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
69. LYPD6B ENSGALG00000028759 831 0.883 - - 0.883 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
70. PKP4 ENSGALG00000012561 3087 0.883 - - 0.883 - - - - - - - plakophilin 4 [Source:NCBI gene;Acc:424328]
71. ACOT9 ENSGALG00000016351 330 0.883 - - 0.883 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
72. NCAPD3 ENSGALG00000001491 221 0.882 - - 0.882 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3
73. METTL6 ENSGALG00000040665 4467 0.881 - - 0.881 - - - - - - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
74. FAM178A FAM178A 2738 0.88 - - 0.880 - - - - - - -
75. VRTN ENSGALG00000010232 692 0.879 - - 0.879 - - - - - - - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
76. ENSGALG00000006463 ENSGALG00000006463 45151 0.879 - - - - - - 0.879 - - -
77. NAT9 ENSGALG00000007723 2098 0.879 - - 0.879 - - - - - - - N-acetyltransferase 9 (putative), transcript variant X7
78. ZOV3 ZOV3 3267 0.878 - - 0.878 - - - - - - -
79. CXorf30 CXorf30 172 0.878 - - 0.878 - - - - - - -
80. AGPAT9 AGPAT9 1823 0.878 - - 0.878 - - - - - - -
81. GBGT1 ENSGALG00000003340 399 0.877 - - 0.877 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [Source:NCBI gene;Acc:417163]
82. SULT2B1L1 ENSGALG00000023472 569 0.877 - - 0.877 - - - - - - - sulfotransferase family cytosolic 2B member 1-like 1
83. BMP2 ENSGALG00000029301 379 0.877 - - 0.877 - - - - - - - bone morphogenetic protein 2 [Source:NCBI gene;Acc:378779]
84. C5H14ORF166 C5H14ORF166 24176 0.876 - - 0.876 - - - - - - -
85. RASSF8 ENSGALG00000014041 850 0.876 - - 0.876 - - - - - - - Ras association domain family member 8 [Source:HGNC Symbol;Acc:HGNC:13232]
86. EYA3 ENSGALG00000000777 922 0.876 - - 0.876 - - - - - - - EYA transcriptional coactivator and phosphatase 3 [Source:NCBI gene;Acc:395717]
87. SLC4A4 ENSGALG00000031105 534 0.876 - - 0.876 - - - - - - - solute carrier family 4 member 4 [Source:HGNC Symbol;Acc:HGNC:11030]
88. CCDC25 ENSGALG00000016586 351 0.874 - - 0.874 - - - - - - - coiled-coil domain containing 25 [Source:HGNC Symbol;Acc:HGNC:25591]
89. SORCS1 ENSGALG00000008465 468 0.874 - - 0.874 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
90. PPIH ENSGALG00000004874 25558 0.874 - - - - - - 0.874 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
91. MAK16 ENSGALG00000001663 7455 0.873 - - 0.873 - - - - - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
92. RPUSD1 ENSGALG00000005315 651 0.873 - - 0.873 - - - - - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
93. INVS ENSGALG00000013441 1123 0.872 - - 0.872 - - - - - - - inversin [Source:NCBI gene;Acc:395234]
94. CEP70 ENSGALG00000012087 7992 0.872 - - 0.872 - - - - - - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
95. NUTF2 ENSGALG00000001602 32832 0.872 - - - - - - 0.872 - - - nuclear transport factor 2 [Source:NCBI gene;Acc:415655]
96. PIH1D3 ENSGALG00000004870 1365 0.871 - - 0.871 - - - - - - - PIH1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28570]
97. RIPPLY3 1380 0.871 - - 0.871 - - - - - - - ripply transcriptional repressor 3
98. CASP1 ENSGALG00000001049 1067 0.871 - - 0.871 - - - - - - - caspase 1, transcript variant X2
99. S100A11 ENSGALG00000036711 23454 0.87 - - 0.870 - - - - - - - S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
100. LRP2 ENSGALG00000010858 363 0.87 - - 0.870 - - - - - - - LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]

There are 692 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA