Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ZBED4

Gene Name Gene ID Reads Annotation
ZBED4 ENSGALG00000032659 5313 zinc finger BED-type containing 4 [Source:NCBI gene;Acc:417734]











Genes with expression patterns similar to ZBED4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. ZBED4 ENSGALG00000032659 5313 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 zinc finger BED-type containing 4 [Source:NCBI gene;Acc:417734]
2. DNAJC3 ENSGALG00000016894 9048 2.356 - - - - - - 0.769 0.855 - 0.732 DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
3. COG5 ENSGALG00000042764 4205 1.803 - - - - - - - 0.879 - 0.924 component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
4. ESRRG ENSGALG00000009645 2783 1.777 - - - - - - - 0.889 - 0.888 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
5. OSBPL1A ENSGALG00000015086 2702 1.757 - - - - - - - 0.879 - 0.878 oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
6. VWF ENSGALG00000017272 1012 1.744 - - - - - - - 0.858 - 0.886 Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
7. C10ORF58 C10ORF58 5045 1.698 - - - - - - - 0.893 - 0.805
8. MPP5 ENSGALG00000009581 724 1.693 - - - - - - - 0.816 - 0.877 membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
9. GOLPH3 ENSGALG00000028267 9692 1.679 - - - - - - - 0.915 - 0.764 golgi phosphoprotein 3, transcript variant X1
10. DNA2 ENSGALG00000004037 5426 1.675 - - - - - - - 0.933 - 0.742 DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
11. TMA16 ENSGALG00000009501 6651 1.674 - - - - - - - 0.919 - 0.755 translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]
12. PRRG1 ENSGALG00000016266 3473 1.671 - - - - - - - 0.867 - 0.804 proline rich and Gla domain 1 [Source:NCBI gene;Acc:418582]
13. SERINC1 ENSGALG00000014868 12484 1.664 - - - - - - - 0.936 - 0.728 serine incorporator 1 [Source:NCBI gene;Acc:421722]
14. FASTKD3 ENSGALG00000033521 1186 1.64 - - - - - - 0.738 - - 0.902 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
15. MADH2 MADH2 13017 1.637 - - - - - - 0.731 0.906 - -
16. MRPL39 ENSGALG00000015742 7025 1.635 - - - - - - 0.732 0.903 - - mitochondrial ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:14027]
17. ZNF598 ENSGALG00000005598 8270 1.63 - - - - - - 0.718 0.912 - - zinc finger protein 598 [Source:HGNC Symbol;Acc:HGNC:28079]
18. GXYLT1 ENSGALG00000009532 5682 1.624 - - - - - - 0.746 - - 0.878 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
19. gga-mir-7476 gga-mir-7476 20209 1.62 - - - - - - 0.741 - - 0.879
20. SEC14L1 ENSGALG00000001684 2776 1.615 - - - - - - 0.724 - - 0.891 SEC14 like lipid binding 1 [Source:HGNC Symbol;Acc:HGNC:10698]
21. ECI2 ENSGALG00000012809 3692 1.61 - - - - - - 0.772 - - 0.838 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
22. MTMR8 ENSGALG00000007590 6022 1.595 - - - - - - 0.792 - - 0.803 myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
23. SMC4 ENSGALG00000009553 15715 1.584 - - - - - - 0.713 - - 0.871 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
24. LACTB2 ENSGALG00000038745 3460 1.583 - - - - - - - 0.807 - 0.776 lactamase beta 2 [Source:NCBI gene;Acc:420178]
25. FNBP1L ENSGALG00000005850 9219 1.581 - - - - - - 0.801 - - 0.780 formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
26. GRTP1 ENSGALG00000016828 3145 1.576 - - - - - - 0.702 - - 0.874 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
27. TMED7 ENSGALG00000028484 21008 1.576 - - - - - - 0.807 - - 0.769 Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
28. CHTF8 ENSGALG00000000632 7230 1.563 - - - - - - 0.718 0.845 - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
29. SP3 ENSGALG00000031796 8997 1.56 - - - - - - 0.826 - - 0.734 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
30. JUP ENSGALG00000017414 6920 1.556 - - - - - - - 0.766 - 0.790 junction plakoglobin [Source:NCBI gene;Acc:429710]
31. KIF11 ENSGALG00000030597 5528 1.554 - - - - - - 0.705 - - 0.849 kinesin family member 11 [Source:NCBI gene;Acc:423809]
32. FBXO5 ENSGALG00000013607 6156 1.552 - - - - - - 0.723 - - 0.829 F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
33. UBL3 ENSGALG00000017084 7417 1.546 - - - - - - 0.723 - - 0.823 ubiquitin like 3 [Source:NCBI gene;Acc:418921]
34. UCHL3 ENSGALG00000016921 16208 1.538 - - - - - - 0.702 - - 0.836 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
35. TMX3 ENSGALG00000013757 6387 1.538 - - - - - - 0.703 - - 0.835 Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
36. HOXA5 ENSGALG00000025929 6231 1.53 - - - - - - 0.828 - - 0.702 homeobox A5 [Source:NCBI gene;Acc:100858404]
37. ODF2 ENSGALG00000004767 3972 1.518 - - - - - - 0.712 - - 0.806 outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
38. SPATA20 ENSGALG00000006857 3506 1.516 - - - - - - 0.758 - - 0.758 spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
39. DTWD2 ENSGALG00000002250 1604 1.514 - - - - - - 0.727 - - 0.787 DTW domain containing 2 [Source:NCBI gene;Acc:427386]
40. DGCR2 ENSGALG00000005891 8405 1.513 - - - - - - 0.716 - - 0.797 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
41. FECH ENSGALG00000038461 3491 1.512 - - - - - - 0.708 - - 0.804 ferrochelatase [Source:NCBI gene;Acc:374020]
42. UPF2 ENSGALG00000033772 9548 1.51 - - - - - - 0.796 - - 0.714 UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
43. UBE2E3 ENSGALG00000020793 9517 1.493 - - - - - - 0.715 - - 0.778 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
44. MYO5A ENSGALG00000031987 2469 1.483 - - - - - - 0.774 - - 0.709 myosin VA [Source:NCBI gene;Acc:396237]
45. HSPA4 ENSGALG00000040882 20966 1.473 - - - - - - 0.734 - - 0.739 heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
46. SMDT1 ENSGALG00000011897 9360 1.465 - - - - - - 0.733 - - 0.732 single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
47. LDB2 ENSGALG00000014485 22490 1.445 - - - - - - 0.709 - - 0.736 LIM domain binding 2 [Source:NCBI gene;Acc:395631]
48. CABLES1 ENSGALG00000014998 1636 0.954 - - - - - - - - - 0.954 Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
49. PPFIA1 ENSGALG00000035774 5258 0.936 - - - - - - - - - 0.936 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
50. TST ENSGALG00000012488 5314 0.934 - - - - - - - 0.934 - - thiosulfate sulfurtransferase [Source:NCBI gene;Acc:418049]
51. KDR ENSGALG00000013907 869 0.931 - - - - - - - - - 0.931 kinase insert domain receptor [Source:NCBI gene;Acc:395323]
52. POLR1C ENSGALG00000010349 7059 0.928 - - - - - - - 0.928 - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
53. SUN1 ENSGALG00000003781 3442 0.927 - - - - - - - 0.927 - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
54. ENSGALG00000017324 ENSGALG00000017324 8235 0.923 - - - - - - - 0.923 - -
55. PLA2G12A ENSGALG00000012185 5261 0.922 - - - - - - - 0.922 - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
56. CHCHD6 ENSGALG00000006056 6121 0.921 - - - - - - - 0.921 - - coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:HGNC Symbol;Acc:HGNC:28184]
57. ERCC6 ENSGALG00000006254 3452 0.92 - - - - - - - - - 0.920 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
58. PDGF-A PDGF-A 5166 0.919 - - - - - - - 0.919 - -
59. ATAD2 ENSGALG00000034348 4440 0.918 - - - - - - - 0.918 - - ATPase family, AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]
60. CNEP1R1 ENSGALG00000029793 6536 0.917 - - - - - - - 0.917 - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:NCBI gene;Acc:415736]
61. FOCAD ENSGALG00000015071 3677 0.915 - - - - - - - - - 0.915 focadhesin [Source:NCBI gene;Acc:427233]
62. KLHL7 ENSGALG00000010938 528 0.915 - - - - - - - - - 0.915 kelch like family member 7 [Source:NCBI gene;Acc:420612]
63. TMEM33 ENSGALG00000014248 6069 0.914 - - - - - - - 0.914 - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
64. FAM206A ENSGALG00000019524 7170 0.913 - - - - - - - 0.913 - - family with sequence similarity 206 member A [Source:NCBI gene;Acc:420983]
65. MAP3K4 ENSGALG00000020003 6378 0.913 - - - - - - - 0.913 - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
66. TBC1D19 ENSGALG00000029673 1868 0.912 - - - - - - - - - 0.912 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
67. gga-mir-1737 ENSGALG00000025206 3910 0.911 - - - - - - - 0.911 - - gga-mir-1737 [Source:miRBase;Acc:MI0007476]
68. PPM1B ENSGALG00000030691 4513 0.91 - - - - - - - 0.910 - - protein phosphatase, Mg2+/Mn2+ dependent 1B [Source:NCBI gene;Acc:421404]
69. ENSGALG00000014375 ENSGALG00000014375 4741 0.91 - - - - - - - 0.910 - -
70. PTX3 ENSGALG00000028284 2984 0.91 - - - - - - - - - 0.910 pentraxin 3 [Source:NCBI gene;Acc:548626]
71. TMEM185A ENSGALG00000009139 4424 0.908 - - - - - - - 0.908 - - transmembrane protein 185A [Source:HGNC Symbol;Acc:HGNC:17125]
72. ACADL ENSGALG00000002891 8058 0.907 - - - - - - - - - 0.907 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
73. CLUH ENSGALG00000005854 2100 0.906 - - - - - - - - - 0.906 clustered mitochondria homolog [Source:HGNC Symbol;Acc:HGNC:29094]
74. USP12P1 USP12P1 4193 0.906 - - - - - - - 0.906 - -
75. STX16 ENSGALG00000007541 6458 0.905 - - - - - - - 0.905 - - syntaxin 16 [Source:NCBI gene;Acc:419315]
76. MED24 ENSGALG00000013506 5403 0.905 - - - - - - - - - 0.905 mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
77. GORASP1 ENSGALG00000006033 4033 0.905 - - - - - - - - - 0.905 golgi reassembly stacking protein 1 [Source:NCBI gene;Acc:420426]
78. C26H6ORF89 C26H6ORF89 1826 0.904 - - - - - - - - - 0.904
79. FBXO38 ENSGALG00000038627 2658 0.903 - - - - - - - - - 0.903 F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
80. RGN ENSGALG00000016724 3184 0.903 - - - - - - - 0.903 - - regucalcin [Source:NCBI gene;Acc:395480]
81. N4BP2 ENSGALG00000014281 3144 0.902 - - - - - - - - - 0.902 NEDD4 binding protein 2, transcript variant X6
82. AGGF1 ENSGALG00000004311 3011 0.902 - - - - - - - - - 0.902 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
83. OSR1 ENSGALG00000016473 1202 0.901 - - - - - - - 0.901 - - odd-skipped related transciption factor 1 [Source:HGNC Symbol;Acc:HGNC:8111]
84. BDP1 BDP1 3073 0.901 - - - - - - - - - 0.901
85. CDKN2AIP ENSGALG00000010661 1218 0.901 - - - - - - - - - 0.901 CDKN2A interacting protein [Source:HGNC Symbol;Acc:HGNC:24325]
86. CPT2 ENSGALG00000010681 3211 0.9 - - - - - - - - - 0.900 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
87. CLUAP1 ENSGALG00000030877 4269 0.9 - - - - - - - 0.900 - - clusterin associated protein 1 [Source:NCBI gene;Acc:426077]
88. ARPC1B ENSGALG00000032588 2407 0.9 - - - - - - - - - 0.900 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
89. MTSS1 ENSGALG00000041969 1312 0.9 - - - - - - - - - 0.900 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
90. GTF2H4 GTF2H4 5227 0.9 - - - - - - - 0.900 - -
91. SLC2A3 SLC2A3 527 0.9 - - - - - - - - - 0.900
92. RPS6KA RPS6KA 6745 0.899 - - - - - - - 0.899 - -
93. DIAPH3 ENSGALG00000016937 1069 0.899 - - - - - - - - - 0.899 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
94. SEMA6D ENSGALG00000030542 3780 0.898 - - - - - - - 0.898 - - semaphorin 6D [Source:HGNC Symbol;Acc:HGNC:16770]
95. SPDL1 ENSGALG00000001942 4403 0.898 - - - - - - - - - 0.898 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
96. XRCC3 ENSGALG00000011533 3768 0.897 - - - - - - - 0.897 - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
97. C1orf50 ENSGALG00000004800 4894 0.897 - - - - - - - 0.897 - - chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:28795]
98. SOX6 ENSGALG00000006074 102 0.896 - - - - - - - - - 0.896 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
99. GTF3C1 ENSGALG00000007387 5788 0.896 - - - - - - - - - 0.896 general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
100. ATXN2 ENSGALG00000004625 6306 0.896 - - - - - - - 0.896 - - ataxin 2 [Source:HGNC Symbol;Acc:HGNC:10555]

There are 687 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA