Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Y_RNA

Gene Name Gene ID Reads Annotation
Y_RNA Y_RNA 0










Genes with expression patterns similar to Y_RNA

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. asap3 ENSDARG00000021896 19 1 - - - - - - - 1.000 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39]
2. zymnd12 17 1 - - - - - - - 1.000 - zinc finger, MYND-type containing 12, transcript variant X1
3. bckdhb ENSDARG00000014676 17 1 - - - - - - - 1.000 - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
4. BX682234.1 ENSDARG00000074732 5 1 - - - - - - - 1.000 - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
5. ttc25 ENSDARG00000058140 2 1 - - - - - - - 1.000 - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
6. CABZ01078515.1 CABZ01078515.1 25 1 - - - - - - - 1.000 -
7. adck1 ENSDARG00000062561 22 1 - - - - - - - 1.000 - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
8. si:ch73-334e23.1 si:ch73-334e23.1 0 1 - - - - - - - 1.000 -
9. LDLR_1 LDLR_1 0 1 - - - - - - - 1.000 -
10. si:ch73-27j14.2 si:ch73-27j14.2 32 1 - - - - - - - 1.000 -
11. p2rx4a ENSDARG00000044752, ENSDARG00000115637 9 1 - - - - - - - 1.000 - purinergic receptor P2X, ligand-gated ion channel, 4a [Source:ZFIN;Acc:ZDB-GENE-020806-2]
12. CABZ01071530.1 CABZ01071530.1 1 1 - - - - - - - 1.000 -
13. CABZ01070007.1 CABZ01070007.1 5 1 - - - - - - - 1.000 -
14. si:dkey-15h8.3 si:dkey-15h8.3 0 1 - - - - - - - 1.000 -
15. ccdc79 2 1 - - - - - - - 1.000 - coiled-coil domain containing 79
16. si:ch211-57f7.7 ENSDARG00000093131 8 1 - - - - - - - 1.000 - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
17. Y_RNA Y_RNA 0 1 - - - - - - - 1.000 -
18. si:ch211-51n3.1 si:ch211-51n3.1 26 1 - - - - - - - 1.000 -
19. ftr56 ENSDARG00000030954 23 1 - - - - - - - 1.000 - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
20. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - - - 1.000 - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
21. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - - - 1.000 -
22. si:dkey-233h12.4 si:dkey-233h12.4 2 1 - - - - - - - 1.000 -
23. UIMC1 200 1 - - - - - - - 1.000 - ubiquitin interaction motif containing 1
24. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - - - - - - 1.000 -
25. ptx4 ENSDARG00000038072 2 1 - - - - - - - 1.000 - pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
26. tirap ENSDARG00000074371 10 1 - - - - - - - 1.000 - toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
27. si:dkey-270b7.2 si:dkey-270b7.2 0 1 - - - - - - - 1.000 -
28. si:dkey-54g2.5 si:dkey-54g2.5 2 1 - - - - - - - 1.000 -
29. rom1b ENSDARG00000026926 4 1 - - - - - - - 1.000 - retinal outer segment membrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1073]
30. psmb11 psmb11 5 1 - - - - - - - 1.000 -
31. si:dkey-179o14.4 si:dkey-179o14.4 2 1 - - - - - - - 1.000 -
32. MTSS1L MTSS1L 7 1 - - - - - - - 1.000 -
33. zbtb32 ENSDARG00000073726 1 1 - - - - - - - 1.000 - zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
34. shank3a ENSDARG00000063332 5 1 - - - - - - - 1.000 - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
35. CABZ01087025.1 ENSDARG00000117232 10 1 - - - - - - - 1.000 -
36. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - - - 1.000 - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
37. si:ch211-137i24.12 ENSDARG00000094537 35 1 - - - - - - - 1.000 - si:ch211-137i24.12 [Source:ZFIN;Acc:ZDB-GENE-060526-36]
38. CABZ01031627.2 CABZ01031627.2 1 1 - - - - - - - 1.000 -
39. gzma ENSDARG00000090380, ENSDARG00000112472 0 1 - - - - - - - 1.000 - granzyme A [Source:ZFIN;Acc:ZDB-GENE-091204-156]
40. si:dkey-261j4.3 ENSDARG00000035151 156 1 - - - - - - - 1.000 - si:dkey-261j4.3 [Source:ZFIN;Acc:ZDB-GENE-060531-124]
41. si:ch73-340m8.2 ENSDARG00000040258 2 1 - - - - - - - 1.000 - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]
42. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - - - - - - 1.000 -
43. siglec15l ENSDARG00000076132 2 1 - - - - - - - 1.000 - sialic acid binding Ig-like lectin 15, like [Source:ZFIN;Acc:ZDB-GENE-100922-281]
44. si:busm1-228j01.5 si:busm1-228j01.5 9 1 - - - - - - - 1.000 -
45. BX004816.2 ENSDARG00000087012 3 1 - - - - - - - 1.000 -
46. rock2b_1 ENSDARG00000004877, ENSDARG00000096433 0 1 - - - - - - - 1.000 - rho-associated, coiled-coil containing protein kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060125-2]
47. si:dkey-238m4.4 ENSDARG00000093248 3 1 - - - - - - - 1.000 - si:dkey-238m4.4 [Source:ZFIN;Acc:ZDB-GENE-100922-215]
48. CU928854.1 CU928854.1 3 1 - - - - - - - 1.000 -
49. slc1a9 ENSDARG00000098269 12 1 - - - - - - - 1.000 - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
50. cep89 ENSDARG00000005092 4 1 - - - - - - - 1.000 - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
51. pip5k1cb ENSDARG00000100313 3 1 - - - - - - - 1.000 - phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]
52. si:ch211-250k18.8_1 2 1 - - - - - - - 1.000 - si:ch211-250k18.8
53. CABZ01079979.1 CABZ01079979.1 1 1 - - - - - - - 1.000 -
54. clec3ba ENSDARG00000076541 3 1 - - - - - - - 1.000 - C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
55. zgc:171704 ENSDARG00000018048 14 0.944 - - - - - - - 0.944 - zgc:171704 [Source:ZFIN;Acc:ZDB-GENE-070820-16]
56. STX3 ENSDARG00000051981 23 0.918 - - - - - - - 0.918 - syntaxin 3 [Source:HGNC Symbol;Acc:HGNC:11438]
57. zgc:153441 ENSDARG00000054797 9 0.842 - - - - - - - 0.842 - zgc:153441 [Source:ZFIN;Acc:ZDB-GENE-060825-39]
58. si:dkey-184j23.1 1 0.822 - - - - - - - 0.822 - si:dkey-184j23.1
59. MAP3K13 ENSDARG00000009493 8 0.822 - - - - - - - 0.822 - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
60. si:ch211-271g18.2 si:ch211-271g18.2 34 0.822 - - - - - - - 0.822 -
61. ptprda 1 0.817 - - - - - - - 0.817 - protein tyrosine phosphatase, receptor type, D, a
62. hsp70l_1 ENSDARG00000055723 72 0.782 - - - - - - - 0.782 - heat shock cognate 70-kd protein, like [Source:ZFIN;Acc:ZDB-GENE-050321-1]
63. FAM131A ENSDARG00000077022 3 0.75 - - - - - - - 0.750 - family with sequence similarity 131, member A [Source:ZFIN;Acc:ZDB-GENE-080204-112]
64. zglp1 ENSDARG00000067669 6 0.744 - - - - - - - 0.744 - zinc finger, GATA-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-359]
65. tmem167b ENSDARG00000059400 9 0.725 - - - - - - - 0.725 - transmembrane protein 167B [Source:ZFIN;Acc:ZDB-GENE-040808-17]
66. CABZ01063402.1 CABZ01063402.1 64 0.725 - - - - - - - 0.725 -
67. si:dkey-46g23.3 si:dkey-46g23.3 16 0.725 - - - - - - - 0.725 -
68. RNF207 RNF207 9 0.702 - - - - - - - 0.702 -
69. si:ch211-218c6.9 si:ch211-218c6.9 40 0.702 - - - - - - - 0.702 -
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA