Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for YTHDF2

Gene Name Gene ID Reads Annotation
YTHDF2 ENSGALG00000034831 15118 YTH N6-methyladenosine RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:31675]











Genes with expression patterns similar to YTHDF2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. YTHDF2 ENSGALG00000034831 15118 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 YTH N6-methyladenosine RNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:31675]
2. SIAH1 ENSGALG00000003916 6682 0.998 - - - - - - 0.998 - - - siah E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:10857]
3. PUM2 ENSGALG00000016481 23625 0.935 - - - - - - 0.935 - - - pumilio RNA binding family member 2 [Source:NCBI gene;Acc:421961]
4. PALB2 ENSGALG00000006078 1549 0.888 - - - - - - - 0.888 - - partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]
5. TP73 ENSGALG00000001006 335 0.887 - - - - - - - 0.887 - - tumor protein p73 [Source:HGNC Symbol;Acc:HGNC:12003]
6. DACT1 ENSGALG00000012023 1008 0.887 - - - - - - - 0.887 - - dishevelled binding antagonist of beta catenin 1 [Source:NCBI gene;Acc:723789]
7. IQCK ENSGALG00000028197 596 0.886 - - - - - - - 0.886 - - IQ motif containing K [Source:HGNC Symbol;Acc:HGNC:28556]
8. KIF21A ENSGALG00000007098 5919 0.886 - - - - - - - 0.886 - - kinesin family member 21A [Source:HGNC Symbol;Acc:HGNC:19349]
9. NHLRC1 ENSGALG00000012688 1476 0.885 - - - - - - - 0.885 - - NHL repeat containing E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21576]
10. CREG1 ENSGALG00000040426 1188 0.885 - - - - - - - 0.885 - - cellular repressor of E1A stimulated genes 1 [Source:NCBI gene;Acc:768680]
11. RFWD2 1215 0.885 - - - - - - - 0.885 - - ring finger and WD repeat domain 2, transcript variant X6
12. FOCAD ENSGALG00000015071 3677 0.884 - - - - - - - 0.884 - - focadhesin [Source:NCBI gene;Acc:427233]
13. MAN2C1 ENSGALG00000001615 2362 0.884 - - - - - - - 0.884 - - mannosidase alpha class 2C member 1 [Source:NCBI gene;Acc:415306]
14. PIGQ ENSGALG00000001985 1584 0.883 - - - - - - - 0.883 - - phosphatidylinositol glycan anchor biosynthesis class Q [Source:HGNC Symbol;Acc:HGNC:14135]
15. DDX54 ENSGALG00000007490 8729 0.883 - - - - - - - 0.883 - - DEAD-box helicase 54 [Source:HGNC Symbol;Acc:HGNC:20084]
16. RPS15A ENSGALG00000006771 287037 0.883 - - - - - - 0.883 - - - ribosomal protein S15a [Source:HGNC Symbol;Acc:HGNC:10389]
17. HGS ENSGALG00000007224 3487 0.882 - - - - - - - 0.882 - - hepatocyte growth factor-regulated tyrosine kinase substrate [Source:HGNC Symbol;Acc:HGNC:4897]
18. COMMD8 ENSGALG00000026279 13509 0.882 - - - - - - - 0.882 - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
19. ADAT1 ENSGALG00000000908 1484 0.881 - - - - - - - 0.881 - - adenosine deaminase, tRNA specific 1 [Source:NCBI gene;Acc:415886]
20. DCAF4 ENSGALG00000009345 2604 0.88 - - - - - - - 0.880 - - DDB1 and CUL4 associated factor 4
21. ASAH1 ENSGALG00000026364 2783 0.88 - - - - - - - 0.880 - - N-acylsphingosine amidohydrolase (acid ceramidase) 1 [Source:NCBI gene;Acc:422727]
22. PI4K2B ENSGALG00000031538 2607 0.88 - - - - - - - 0.880 - - phosphatidylinositol 4-kinase type 2 beta [Source:NCBI gene;Acc:422807]
23. KIF18B ENSGALG00000031553 3192 0.878 - - - - - - - 0.878 - - kinesin family member 18B [Source:NCBI gene;Acc:419968]
24. MRPL22 ENSGALG00000003919 2760 0.877 - - - - - - - 0.877 - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
25. PSMC3IP ENSGALG00000019741 5428 0.877 - - - - - - - 0.877 - - PSMC3 interacting protein [Source:HGNC Symbol;Acc:HGNC:17928]
26. EXOC8 ENSGALG00000043280 3596 0.877 - - - - - - - 0.877 - - exocyst complex component 8 [Source:NCBI gene;Acc:421531]
27. ERP44 ENSGALG00000013452 5352 0.877 - - - - - - - 0.877 - - endoplasmic reticulum protein 44 [Source:HGNC Symbol;Acc:HGNC:18311]
28. ZDHHC14 ENSGALG00000013695 2648 0.873 - - - - - - - 0.873 - - zinc finger DHHC-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20341]
29. AIF1L ENSGALG00000029834 13866 0.869 - - - - - - - 0.869 - - allograft inflammatory factor 1 like [Source:HGNC Symbol;Acc:HGNC:28904]
30. COMT ENSGALG00000002024 2483 0.868 - - - - - - - 0.868 - - catechol-O-methyltransferase [Source:HGNC Symbol;Acc:HGNC:2228]
31. SS18 ENSGALG00000015119 4687 0.868 - - - - - - - 0.868 - - SS18, nBAF chromatin remodeling complex subunit [Source:NCBI gene;Acc:421085]
32. NUMA1 ENSGALG00000001258 8406 0.866 - - - - - - - 0.866 - - nuclear mitotic apparatus protein 1 [Source:NCBI gene;Acc:768717]
33. RERE ENSGALG00000002232 8724 0.865 - - - - - - - 0.865 - - arginine-glutamic acid dipeptide repeats [Source:HGNC Symbol;Acc:HGNC:9965]
34. COMMD10 ENSGALG00000002308 7442 0.865 - - - - - - - 0.865 - - COMM domain containing 10 [Source:NCBI gene;Acc:427388]
35. C14orf1 C14orf1 14289 0.862 - - - - - - - 0.862 - -
36. NDUFA9 ENSGALG00000017282 14358 0.861 - - - - - - - 0.861 - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
37. GTF3A ENSGALG00000017098 9264 0.859 - - - - - - - 0.859 - - general transcription factor IIIA [Source:NCBI gene;Acc:418931]
38. KRR1 ENSGALG00000010227 11783 0.858 - - - - - - - 0.858 - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
39. DRG1 ENSGALG00000006921 10791 0.855 - - - - - - - 0.855 - - developmentally regulated GTP binding protein 1 [Source:NCBI gene;Acc:416962]
40. ISY1 ENSGALG00000005012 7477 0.85 - - - - - - - 0.850 - - ISY1 splicing factor homolog
41. LIX1 ENSGALG00000015290 7589 0.833 - - - - - - - 0.833 - - limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
42. HSPD1 ENSGALG00000008094 40870 0.828 - - - - - - - 0.828 - - heat shock protein family D (Hsp60) member 1 [Source:NCBI gene;Acc:424059]
43. BCAR1 ENSGALG00000042895 8222 0.827 - - - - - - - 0.827 - - BCAR1, Cas family scaffold protein [Source:HGNC Symbol;Acc:HGNC:971]
44. PIK3C2B ENSGALG00000037043 4522 0.818 - - - - - - 0.818 - - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
45. TUSC3 ENSGALG00000013674 2848 0.818 - - - - - - 0.818 - - - tumor suppressor candidate 3 [Source:HGNC Symbol;Acc:HGNC:30242]
46. GBX-1 GBX-1 1430 0.818 - - - - - - 0.818 - - -
47. UTP14A ENSGALG00000024039 8532 0.818 - - - - - - 0.818 - - - UTP14A small subunit processome component
48. ECE-1 ECE-1 3057 0.818 - - - - - - 0.818 - - -
49. PRRC2B 1997 0.818 - - - - - - 0.818 - - - proline rich coiled-coil 2B, transcript variant X12
50. WDYHV1 ENSGALG00000030059 2961 0.818 - - - - - - 0.818 - - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
51. THBS4 ENSGALG00000014804 4228 0.817 - - - - - - 0.817 - - - Gallus gallus thrombospondin 4 (THBS4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321549]
52. RAP1GDS1 ENSGALG00000012222 10078 0.817 - - - - - - 0.817 - - - rap1 GTPase-GDP dissociation stimulator 1 [Source:NCBI gene;Acc:422701]
53. KIAA0922 4430 0.817 - - - - - - 0.817 - - - KIAA0922, transcript variant X4
54. C1H21ORF33 ENSGALG00000019171 8910 0.816 - - - - - - 0.816 - - - chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
55. PRRX1 ENSGALG00000003324 4859 0.816 - - - - - - 0.816 - - - paired related homeobox 1 [Source:NCBI gene;Acc:373941]
56. HSPA14 ENSGALG00000035201 7372 0.816 - - - - - - 0.816 - - - heat shock protein family A (Hsp70) member 14
57. MAPKAPK2 ENSGALG00000000883 6174 0.816 - - - - - - 0.816 - - - mitogen-activated protein kinase-activated protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:6887]
58. ARCN1 ENSGALG00000007430 21499 0.815 - - - - - - 0.815 - - - archain 1 [Source:NCBI gene;Acc:770561]
59. NAP1L4 ENSGALG00000006446 10868 0.815 - - - - - - 0.815 - - - nucleosome assembly protein 1 like 4 [Source:NCBI gene;Acc:423087]
60. MRPS27 ENSGALG00000015002 6541 0.815 - - - - - - 0.815 - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
61. TDP2 ENSGALG00000013637 6595 0.815 - - - - - - 0.815 - - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
62. ENSGALG00000001861 ENSGALG00000001861 10150 0.814 - - - - - - 0.814 - - -
63. DSTN ENSGALG00000008667 82955 0.814 - - - - - - 0.814 - - - destrin, actin depolymerizing factor [Source:NCBI gene;Acc:396539]
64. AP2M1 ENSGALG00000008432 16249 0.813 - - - - - - 0.813 - - - adaptor related protein complex 2 mu 1 subunit [Source:NCBI gene;Acc:770246]
65. RIOK3 ENSGALG00000015004 4249 0.813 - - - - - - - 0.813 - - RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]
66. DNMT3B ENSGALG00000041461 12959 0.813 - - - - - - 0.813 - - - DNA methyltransferase 3 beta [Source:NCBI gene;Acc:419287]
67. DHX36 ENSGALG00000043082 17619 0.811 - - - - - - 0.811 - - - DEAH-box helicase 36 [Source:HGNC Symbol;Acc:HGNC:14410]
68. RABIF ENSGALG00000000436 6449 0.81 - - - - - - - 0.810 - - RAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]
69. EEF1E1 ENSGALG00000012781 22615 0.807 - - - - - - 0.807 - - - eukaryotic translation elongation factor 1 epsilon 1
70. CHMP4B ENSGALG00000002095 17422 0.807 - - - - - - 0.807 - - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
71. AURKAIP1 ENSGALG00000001555 14715 0.806 - - - - - - 0.806 - - - aurora kinase A interacting protein 1 [Source:NCBI gene;Acc:419415]
72. ENSGALG00000021694 ENSGALG00000021694 26011 0.805 - - - - - - 0.805 - - -
73. KIF2A ENSGALG00000014737 16391 0.804 - - - - - - 0.804 - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
74. EI24 ENSGALG00000038097 24081 0.804 - - - - - - - 0.804 - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
75. BRT-1 BRT-1 26083 0.803 - - - - - - 0.803 - - -
76. SGSM3 ENSGALG00000012033 1839 0.802 - - - - - - - 0.802 - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
77. PRELP ENSGALG00000034456 4354 0.801 - - - - - - - 0.801 - - proline and arginine rich end leucine rich repeat protein [Source:HGNC Symbol;Acc:HGNC:9357]
78. gga-mir-762 ENSGALG00000025437 24823 0.799 - - - - - - 0.799 - - - gga-mir-762 [Source:miRBase;Acc:MI0008209]
79. CWC15 ENSGALG00000017207 30922 0.793 - - - - - - 0.793 - - - CWC15 spliceosome associated protein homolog [Source:NCBI gene;Acc:418996]
80. UBE2C ENSGALG00000026380 27639 0.793 - - - - - - 0.793 - - - ubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]
81. MTX2 ENSGALG00000009264 17304 0.791 - - - - - - 0.791 - - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
82. RPL39 ENSGALG00000008620 63315 0.79 - - - - - - 0.790 - - - ribosomal protein L39 [Source:NCBI gene;Acc:374132]
83. ATG3 ENSGALG00000015204 11277 0.79 - - - - - - - 0.790 - - autophagy related 3 [Source:NCBI gene;Acc:418369]
84. HRAS1 HRAS1 7988 0.788 - - - - - - - 0.788 - -
85. GREB1 ENSGALG00000016455 12794 0.787 - - - - - - - 0.787 - - growth regulating estrogen receptor binding 1 [Source:HGNC Symbol;Acc:HGNC:24885]
86. DYNLRB1 ENSGALG00000034509 28361 0.785 - - - - - - 0.785 - - - dynein light chain roadblock-type 1
87. ATF4 ENSGALG00000012135 53361 0.784 - - - - - - 0.784 - - - activating transcription factor 4 [Source:NCBI gene;Acc:395693]
88. PSMA7 ENSGALG00000030411 42436 0.783 - - - - - - 0.783 - - - proteasome subunit alpha 7 [Source:NCBI gene;Acc:395318]
89. TUBB6 ENSGALG00000031275 17690 0.782 - - - - - - - 0.782 - - tubulin beta 6 class V [Source:NCBI gene;Acc:421037]
90. TRA2B ENSGALG00000006531 40566 0.776 - - - - - - 0.776 - - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
91. HBE 329974 0.771 - - - - - - - 0.771 - - hemoglobin subunit epsilon
92. CBX3 ENSGALG00000011038 40977 0.771 - - - - - - 0.771 - - - chromobox 3 [Source:NCBI gene;Acc:395355]
93. ATP6V1C1 ENSGALG00000034099 9898 0.771 - - - - - - - 0.771 - - ATPase H+ transporting V1 subunit C1 [Source:HGNC Symbol;Acc:HGNC:856]
94. IP6K2 ENSGALG00000005701 12539 0.765 - - - - - - - 0.765 - - inositol hexakisphosphate kinase 2 [Source:NCBI gene;Acc:416010]
95. FYTTD1 ENSGALG00000007581 9341 0.765 - - - - - - - 0.765 - - forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
96. BTBD1 ENSGALG00000006020 14157 0.762 - - - - - - - 0.762 - - BTB domain containing 1 [Source:NCBI gene;Acc:415461]
97. FAF2 ENSGALG00000003331 4776 0.762 - - - - - - - 0.762 - - Fas associated factor family member 2 [Source:HGNC Symbol;Acc:HGNC:24666]
98. MBNL1 ENSGALG00000029190 3953 0.761 - - - - - - - 0.761 - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
99. CUL3 ENSGALG00000005108 9571 0.76 - - - - - - - 0.760 - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
100. ERP29 ENSGALG00000023510 47100 0.759 - - - - - - - 0.759 - - endoplasmic reticulum protein 29 [Source:NCBI gene;Acc:416882]

There are 24 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA