Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for YTHDF1

Gene Name Gene ID Reads Annotation
YTHDF1 ENSGALG00000005745 135 YTH N6-methyladenosine RNA binding protein 1 [Source:NCBI gene;Acc:419238]











Genes with expression patterns similar to YTHDF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. YTHDF1 ENSGALG00000005745 135 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 YTH N6-methyladenosine RNA binding protein 1 [Source:NCBI gene;Acc:419238]
2. PITPNM2 ENSGALG00000003645 17 1.677 - - - - - - - 0.700 - 0.977 phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
3. SLC9A9 ENSGALG00000002374 179 1.621 - - - - - 0.794 - - - 0.827 solute carrier family 9 member A9 [Source:NCBI gene;Acc:424772]
4. ASB13 ENSGALG00000008401 181 1.509 - - - - - 0.783 - - - 0.726 ankyrin repeat and SOCS box containing 13 [Source:NCBI gene;Acc:416691]
5. RAP2C ENSGALG00000006061 11 0.977 - - - - - - - - - 0.977 RAP2C, member of RAS oncogene family [Source:NCBI gene;Acc:422232]
6. ENSGALG00000000188 ENSGALG00000000188 11 0.977 - - - - - - - - - 0.977
7. SLC39A8 ENSGALG00000012298 9 0.977 - - - - - - - - - 0.977 solute carrier family 39 member 8 [Source:HGNC Symbol;Acc:HGNC:20862]
8. RANBP3L 19 0.976 - - - - - - - - - 0.976 RAN binding protein 3 like, transcript variant X2
9. PDCL ENSGALG00000001275 24 0.973 - - - - - - - 0.973 - - phosducin like [Source:HGNC Symbol;Acc:HGNC:8770]
10. CPN2 ENSGALG00000045776 18 0.972 - - - - - - - - - 0.972 carboxypeptidase N subunit 2
11. KIAA1045 KIAA1045 23 0.972 - - - - - - - - - 0.972
12. LOC421584 ENSGALG00000011579 8 0.97 - - - - - - - - - 0.970 solute carrier family 22 member 2-like
13. NUDT15 ENSGALG00000016994 210 0.965 - - - - - - - - - 0.965 nudix hydrolase 15 [Source:HGNC Symbol;Acc:HGNC:23063]
14. TTC28 ENSGALG00000005676 36 0.963 - - - - - - - - - 0.963 tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
15. FAM105A ENSGALG00000012965 6 0.963 - - - - - - - - - 0.963 family with sequence similarity 105 member A [Source:NCBI gene;Acc:769855]
16. LRRC2 ENSGALG00000013634 69 0.959 - - - - - - - - - 0.959 leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:14676]
17. PLCXD1 ENSGALG00000016721 289 0.957 - - - - - - - - - 0.957 phosphatidylinositol specific phospholipase C X domain containing 1 [Source:NCBI gene;Acc:418673]
18. SLC6A13 ENSGALG00000012985 194 0.955 - - - - - - - - - 0.955 solute carrier family 6 member 13 [Source:HGNC Symbol;Acc:HGNC:11046]
19. CENPA ENSGALG00000037735 171 0.955 - - - - - - - - - 0.955 centromere protein A [Source:NCBI gene;Acc:100113359]
20. RXFP1 ENSGALG00000009429 10 0.952 - - - - - - - - - 0.952 relaxin family peptide receptor 1 [Source:HGNC Symbol;Acc:HGNC:19718]
21. OIT3 ENSGALG00000004345 4886 0.944 - - - - - - - - - 0.944 oncoprotein induced transcript 3 [Source:HGNC Symbol;Acc:HGNC:29953]
22. PPP1R15B ENSGALG00000000611 412 0.938 - - - - - - - - - 0.938 protein phosphatase 1 regulatory subunit 15B [Source:HGNC Symbol;Acc:HGNC:14951]
23. ENSGALG00000000789 ENSGALG00000000789 24 0.935 - - - - - - - - - 0.935
24. SHCBP1 ENSGALG00000004444 59 0.935 - - - - - - - - - 0.935 SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]
25. URAH ENSGALG00000000549 484 0.934 - - - - - - - - - 0.934 5-hydroxyisourate hydrolase [Source:NCBI gene;Acc:415859]
26. ZNF814 ZNF814 13 0.933 - - - - - - - - - 0.933
27. PCNXL4 PCNXL4 58 0.931 - - - - - - - - - 0.931
28. ANKRD28 ENSGALG00000011226 160 0.928 - - - - - - - - - 0.928 ankyrin repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29024]
29. CYP3A4 ENSGALG00000004436 75 0.928 - - - - - - - - - 0.928 Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
30. TRPC6 ENSGALG00000029416 281 0.927 - - - - - - - - - 0.927 transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
31. PHF10 ENSGALG00000011192 361 0.921 - - - - - - - - - 0.921 PHD finger protein 10 [Source:HGNC Symbol;Acc:HGNC:18250]
32. LPHN3 LPHN3 41 0.915 - - - - - - - - - 0.915
33. U2_1 U2_1 13 0.912 - - - - - - - - - 0.912
34. SLC37A2 ENSGALG00000035842 1183 0.909 - - - - - - - - - 0.909 solute carrier family 37 member 2 [Source:HGNC Symbol;Acc:HGNC:20644]
35. SPTY2D1 ENSGALG00000006355 994 0.908 - - - - - - - - - 0.908 SPT2 chromatin protein domain containing 1 [Source:NCBI gene;Acc:423083]
36. LY86 ENSGALG00000012801 865 0.907 - - - - - - - - - 0.907 lymphocyte antigen 86 [Source:NCBI gene;Acc:420872]
37. MKNK1 ENSGALG00000010440 196 0.906 - - - - - - - - - 0.906 MAP kinase interacting serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:7110]
38. GYPC ENSGALG00000011566 99 0.906 - - - - - 0.906 - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
39. CABP2 ENSGALG00000037497 329 0.903 - - - - - - - - - 0.903 calcium binding protein 2 [Source:NCBI gene;Acc:429967]
40. FHOD1 ENSGALG00000002198 426 0.9 - - - - - - - - - 0.900 formin homology 2 domain containing 1 [Source:NCBI gene;Acc:415672]
41. PIM3 ENSGALG00000023576 30 0.9 - - - - - - - - - 0.900 Pim-3 proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:19310]
42. CORO7 ENSGALG00000038325 580 0.899 - - - - - - - - - 0.899 coronin 7 [Source:NCBI gene;Acc:416670]
43. PRKAA1 ENSGALG00000014832 547 0.892 - - - - - - - - - 0.892 protein kinase AMP-activated catalytic subunit alpha 1 [Source:NCBI gene;Acc:427185]
44. CELF1 ENSGALG00000008097 4717 0.891 - - - - - 0.891 - - - - CUGBP Elav-like family member 1 [Source:NCBI gene;Acc:373923]
45. CLASP1 ENSGALG00000011645 1378 0.889 - - - - - 0.889 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
46. VWA1 ENSGALG00000001527 79 0.888 - - - - - - - - - 0.888 von Willebrand factor A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30910]
47. DSEL ENSGALG00000042505 92 0.887 - - - - - 0.887 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
48. KCTD20 ENSGALG00000000511 298 0.887 - - - - - - - - - 0.887 potassium channel tetramerization domain containing 20 [Source:HGNC Symbol;Acc:HGNC:21052]
49. RHOBTB1 ENSGALG00000003073 56 0.886 - - - - - - - - - 0.886 Rho related BTB domain containing 1 [Source:NCBI gene;Acc:423664]
50. LOC416530 ENSGALG00000005291 207 0.883 - - - - - - - - - 0.883 uncharacterized LOC416530, transcript variant X1
51. CARD8 ENSGALG00000007698 45 0.883 - - - - - - - - - 0.883 caspase recruitment domain family, member 8
52. SRGAP2 ENSGALG00000000816 97 0.882 - - - - - - - - - 0.882 SLIT-ROBO Rho GTPase activating protein 2, transcript variant X11
53. CHIC1 ENSGALG00000040956 1177 0.882 - - - - - - - - - 0.882 cysteine rich hydrophobic domain 1 [Source:NCBI gene;Acc:422318]
54. UNC93B1 ENSGALG00000039347 342 0.88 - - - - - - - 0.880 - - unc-93 homolog B1 (C. elegans), transcript variant X6
55. GOLGA1 ENSGALG00000001025 334 0.879 - - - - - 0.879 - - - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
56. ENSGALG00000006951 ENSGALG00000006951 48 0.877 - - - - - - - - - 0.877
57. DDX59 ENSGALG00000002164 3314 0.877 - - - - - 0.877 - - - - DEAD-box helicase 59 [Source:HGNC Symbol;Acc:HGNC:25360]
58. SYNC ENSGALG00000003529 389 0.877 - - - - - - - - - 0.877 syncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:HGNC:28897]
59. OLFML1 ENSGALG00000027184 19 0.876 - - - - - 0.876 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
60. KIF7 ENSGALG00000006611 33 0.875 - - - - - 0.875 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
61. NIPAL4 ENSGALG00000039687 29 0.875 - - - - - 0.875 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
62. RAC3 ENSGALG00000040606 355 0.875 - - - - - 0.875 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
63. SH2D1B ENSGALG00000028448 17 0.874 - - - - - 0.874 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
64. EIF4G1 ENSGALG00000008520 1241 0.874 - - - - - - - - - 0.874 eukaryotic translation initiation factor 4 gamma 1 [Source:HGNC Symbol;Acc:HGNC:3296]
65. GPD1L2 ENSGALG00000012061 31 0.874 - - - - - 0.874 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
66. HJURP ENSGALG00000015363 54 0.872 - - - - - 0.872 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
67. ADNP2 ENSGALG00000035669 318 0.872 - - - - - 0.872 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
68. ACN9 ACN9 269 0.871 - - - - - 0.871 - - - -
69. SELM SELM 6366 0.871 - - - - - - - - - 0.871
70. RNF214 ENSGALG00000036993 3729 0.87 - - - - - 0.870 - - - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
71. ELMSAN1 ENSGALG00000009282 79 0.868 - - - - - 0.868 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
72. KCNMB2 ENSGALG00000031929 97 0.868 - - - - - - - - - 0.868 potassium calcium-activated channel subfamily M regulatory beta subunit 2, transcript variant X4
73. PACSIN2 ENSGALG00000014159 601 0.868 - - - - - 0.868 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
74. LOC419851 ENSGALG00000023953 80 0.867 - - - - - 0.867 - - - - complement component 4 binding protein, alpha chain
75. TBC1D24 ENSGALG00000009217 43 0.867 - - - - - - - - - 0.867 TBC1 domain family member 24 [Source:NCBI gene;Acc:100859828]
76. LOC420160 ENSGALG00000004252 188 0.866 - - - - - - - - - 0.866 cathepsin L1-like, transcript variant X3
77. DRD4 ENSGALG00000040761 79 0.865 - - - - - 0.865 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
78. FGD4 ENSGALG00000012932 50 0.864 - - - - - 0.864 - - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
79. LRRC1 ENSGALG00000016304 21 0.864 - - - - - - - - - 0.864 leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]
80. COBL ENSGALG00000013102 84 0.864 - - - - - 0.864 - - - - cordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]
81. BLVRA ENSGALG00000031786 23 0.862 - - - - - 0.862 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
82. C1orf168 C1orf168 98 0.861 - - - - - 0.861 - - - -
83. RELT 1138 0.86 - - - - - - - - - 0.860 RELT tumor necrosis factor receptor, transcript variant X4
84. DBT ENSGALG00000005280 2893 0.86 - - - - - 0.860 - - - - dihydrolipoamide branched chain transacylase E2 [Source:NCBI gene;Acc:395374]
85. AQP1 ENSGALG00000005209 111 0.858 - - - - - 0.858 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
86. ENSGALG00000002946 ENSGALG00000002946 56 0.858 - - - - - 0.858 - - - -
87. ST6GALNAC4 ENSGALG00000005063 1056 0.858 - - - - - - - - - 0.858 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 [Source:NCBI gene;Acc:395182]
88. PLCB4 ENSGALG00000008907 623 0.857 - - - - - - - - - 0.857 phospholipase C beta 4 [Source:NCBI gene;Acc:416730]
89. POLB ENSGALG00000040828 7462 0.856 - - - - - 0.856 - - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
90. PPM1K ENSGALG00000011266 111 0.853 - - - - - - - - - 0.853 protein phosphatase, Mg2+/Mn2+ dependent 1K [Source:HGNC Symbol;Acc:HGNC:25415]
91. MCC ENSGALG00000000208 61 0.853 - - - - - 0.853 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
92. DIAPH3 ENSGALG00000016937 1069 0.853 - - - - - 0.853 - - - - diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
93. GRB2 ENSGALG00000008016 216 0.853 - - - - - 0.853 - - - - growth factor receptor bound protein 2 [Source:NCBI gene;Acc:386572]
94. GTF3C4 ENSGALG00000031016 1221 0.853 - - - - - 0.853 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
95. SCAF8 ENSGALG00000013635 421 0.852 - - - - - 0.852 - - - - SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]
96. LTC4SL ENSGALG00000011450 645 0.851 - - - - - 0.851 - - - - leukotriene C4 synthase-like, transcript variant X3
97. PRUNE PRUNE 452 0.851 - - - - - 0.851 - - - -
98. TPCN3 ENSGALG00000008198 124 0.85 - - - - - 0.850 - - - - two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
99. SERPINB5 ENSGALG00000012873 24 0.85 - - - - - - - - - 0.850 serpin family B member 5 [Source:HGNC Symbol;Acc:HGNC:8949]
100. PRKDC ENSGALG00000042469 449 0.85 - - - - - 0.850 - - - - protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]

There are 286 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA