Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for YRDC

Gene Name Gene ID Reads Annotation
YRDC ENSGALG00000029001 6529 yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]











Genes with expression patterns similar to YRDC

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. YRDC ENSGALG00000029001 6529 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
2. DAD1 ENSGALG00000035626 32604 1.676 - - - - - - 0.842 0.834 - - defender against cell death 1 [Source:NCBI gene;Acc:395343]
3. CCNH ENSGALG00000015641 8051 1.581 - - - - - - 0.821 0.760 - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
4. TRAPPC6B ENSGALG00000010157 7567 1.579 - - - - - - 0.795 0.784 - - trafficking protein particle complex 6B [Source:NCBI gene;Acc:423337]
5. TRAPPC2L ENSGALG00000006250 21772 1.577 - - - - - - 0.795 0.782 - - trafficking protein particle complex 2 like [Source:HGNC Symbol;Acc:HGNC:30887]
6. KLHL21 ENSGALG00000035211 6145 1.563 - - - - - - 0.753 0.810 - - kelch like family member 21 [Source:HGNC Symbol;Acc:HGNC:29041]
7. NUP85 ENSGALG00000007974 21249 1.56 - - - - - - 0.772 0.788 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
8. HOXA5 ENSGALG00000025929 6231 1.553 - - - - - - 0.781 0.772 - - homeobox A5 [Source:NCBI gene;Acc:100858404]
9. RRP1B ENSGALG00000035696 12309 1.546 - - - - - - 0.812 0.734 - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
10. HARS ENSGALG00000035080 11602 1.545 - - - - - - 0.769 0.776 - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
11. DCPS ENSGALG00000031143 10191 1.541 - - - - - - 0.739 0.802 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
12. BPNT1 ENSGALG00000009576 7445 1.538 - - - - - - 0.712 0.826 - - 3'(2'), 5'-bisphosphate nucleotidase 1 [Source:NCBI gene;Acc:421347]
13. NAA20 ENSGALG00000012587 11349 1.531 - - - - - - 0.719 0.812 - - N(alpha)-acetyltransferase 20, NatB catalytic subunit [Source:HGNC Symbol;Acc:HGNC:15908]
14. RIOK2 ENSGALG00000015288 6280 1.529 - - - - - - 0.719 0.810 - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
15. C11H16ORF80 C11H16ORF80 18673 1.525 - - - - - - 0.719 0.806 - -
16. R3HDM1 ENSGALG00000012246 6580 1.522 - - - - - - 0.778 0.744 - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
17. WDR3 ENSGALG00000014791 5856 1.516 - - - - - - 0.811 0.705 - - WD repeat domain 3 [Source:NCBI gene;Acc:427952]
18. GABPB1 ENSGALG00000023440 5676 1.513 - - - - - - 0.716 0.797 - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
19. CTSL2 CTSL2 7966 1.51 - - - - - - 0.742 0.768 - -
20. C2H6orf52 ENSGALG00000012721 3631 1.509 - - - - - - 0.807 0.702 - - chromosome 2 C6orf52 homolog [Source:NCBI gene;Acc:420849]
21. RPA3 ENSGALG00000010700 6212 1.509 - - - - - - 0.728 0.781 - - replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]
22. MRPL47 ENSGALG00000013759 9044 1.505 - - - - - - 0.753 0.752 - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
23. LLPH ENSGALG00000019358 20976 1.504 - - - - - - 0.784 0.720 - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
24. TIPRL ENSGALG00000015246 7875 1.5 - - - - - - 0.702 0.798 - - TOR signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:30231]
25. NDUFA12 ENSGALG00000011325 19807 1.497 - - - - - - 0.740 0.757 - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
26. MRPL2 ENSGALG00000008597 16500 1.495 - - - - - - 0.726 0.769 - - mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]
27. COBRA1 COBRA1 4600 1.494 - - - - - - 0.730 0.764 - -
28. SETD3 ENSGALG00000034802 4125 1.483 - - - - - - 0.742 0.741 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
29. ADRM1 ENSGALG00000005200 5417 1.483 - - - - - - 0.758 0.725 - - adhesion regulating molecule 1 [Source:NCBI gene;Acc:395365]
30. DSCR3 3583 1.481 - - - - - - 0.759 0.722 - - DSCR3 arrestin fold containing, transcript variant X1
31. NOP16 ENSGALG00000003355 10692 1.48 - - - - - - 0.739 0.741 - - NOP16 nucleolar protein
32. FANCL ENSGALG00000030022 7423 1.474 - - - - - - 0.756 0.718 - - FA complementation group L [Source:NCBI gene;Acc:421202]
33. TIMM8A ENSGALG00000004963 14263 1.468 - - - - - - 0.703 0.765 - - translocase of inner mitochondrial membrane 8A [Source:NCBI gene;Acc:422190]
34. DNM1L ENSGALG00000012929 6174 1.465 - - - - - - 0.716 0.749 - - dynamin 1 like [Source:NCBI gene;Acc:418132]
35. RFC1 ENSGALG00000014298 6516 1.461 - - - - - - 0.710 0.751 - - replication factor C subunit 1 [Source:NCBI gene;Acc:422788]
36. HYPK ENSGALG00000013916 4900 1.45 - - - - - - 0.725 0.725 - - huntingtin interacting protein K [Source:NCBI gene;Acc:770307]
37. AGO3 ENSGALG00000043711 5086 1.449 - - - - - - 0.722 0.727 - - argonaute 3, RISC catalytic component [Source:NCBI gene;Acc:419628]
38. ABHD12 ENSGALG00000008525 5763 1.447 - - - - - - 0.735 0.712 - - abhydrolase domain containing 12 [Source:NCBI gene;Acc:421249]
39. EXOSC10 ENSGALG00000003086 3223 1.442 - - - - - - 0.709 0.733 - - exosome component 10 [Source:NCBI gene;Acc:419454]
40. KDM3B ENSGALG00000007663 7189 1.441 - - - - - - 0.712 0.729 - - lysine demethylase 3B [Source:HGNC Symbol;Acc:HGNC:1337]
41. OXNAD1 ENSGALG00000011239 2521 1.414 - - - - - - 0.709 0.705 - - oxidoreductase NAD binding domain containing 1 [Source:NCBI gene;Acc:420644]
42. URM1 ENSGALG00000004971 17880 0.886 - - - - - - - 0.886 - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
43. PSMB3 ENSGALG00000001597 22588 0.884 - - - - - - - 0.884 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
44. CHTF8 ENSGALG00000000632 7230 0.878 - - - - - - 0.878 - - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
45. MRPL39 ENSGALG00000015742 7025 0.869 - - - - - - 0.869 - - - mitochondrial ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:14027]
46. TBP ENSGALG00000011171 5759 0.866 - - - - - - - 0.866 - - TATA-box binding protein [Source:NCBI gene;Acc:395995]
47. TNRC6A ENSGALG00000006068 9166 0.862 - - - - - - 0.862 - - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
48. KRR1 ENSGALG00000010227 11783 0.856 - - - - - - 0.856 - - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
49. CNOT8 ENSGALG00000003950 8271 0.855 - - - - - - 0.855 - - - CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:416255]
50. PGAM5 ENSGALG00000002137 7700 0.855 - - - - - - 0.855 - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
51. ACP1 ENSGALG00000016363 10636 0.854 - - - - - - - 0.854 - - acid phosphatase 1 [Source:NCBI gene;Acc:421909]
52. TM9SF2L ENSGALG00000006487 5566 0.851 - - - - - - 0.851 - - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
53. XPO4 ENSGALG00000017132 2538 0.85 - - - - - - - 0.850 - - exportin 4 [Source:NCBI gene;Acc:428081]
54. NUP93 ENSGALG00000003010 16504 0.85 - - - - - - - 0.850 - - nucleoporin 93 [Source:NCBI gene;Acc:415693]
55. BLMH ENSGALG00000004259 36907 0.845 - - - - - - - 0.845 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
56. HSCB ENSGALG00000005706 12953 0.844 - - - - - - - 0.844 - - HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
57. ARID2 ENSGALG00000033074 3461 0.844 - - - - - - 0.844 - - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
58. PSMD10 ENSGALG00000008287 11380 0.843 - - - - - - - 0.843 - - proteasome 26S subunit, non-ATPase 10 [Source:NCBI gene;Acc:422351]
59. PTPMT1 ENSGALG00000008091 6160 0.842 - - - - - - - 0.842 - - protein tyrosine phosphatase, mitochondrial 1 [Source:NCBI gene;Acc:423181]
60. MICALL1 ENSGALG00000012265 3753 0.841 - - - - - - 0.841 - - - MICAL like 1 [Source:NCBI gene;Acc:418032]
61. CENPW ENSGALG00000027454 7517 0.841 - - - - - - 0.841 - - - centromere protein W [Source:NCBI gene;Acc:421716]
62. NR2C1 ENSGALG00000011327 5109 0.841 - - - - - - 0.841 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
63. NDUFB3 ENSGALG00000008239 15511 0.839 - - - - - - 0.839 - - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
64. METTL23 ENSGALG00000001790 7906 0.837 - - - - - - 0.837 - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
65. PWP1 ENSGALG00000012631 10536 0.831 - - - - - - - 0.831 - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
66. KIAA0020 KIAA0020 14353 0.831 - - - - - - 0.831 - - -
67. TMEM258 ENSGALG00000038292 31116 0.83 - - - - - - - 0.830 - - transmembrane protein 258 [Source:NCBI gene;Acc:422964]
68. WHSC2 WHSC2 3673 0.829 - - - - - - 0.829 - - -
69. AZIN1 ENSGALG00000029295 11085 0.827 - - - - - - - 0.827 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
70. LAPTM4A ENSGALG00000016479 15973 0.827 - - - - - - 0.827 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
71. ARFIP1 ENSGALG00000041361 7351 0.826 - - - - - - - 0.826 - - ADP ribosylation factor interacting protein 1 [Source:NCBI gene;Acc:770884]
72. GALNT1 ENSGALG00000013135 13583 0.825 - - - - - - 0.825 - - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
73. B4GAL-T7 B4GAL-T7 12356 0.825 - - - - - - - 0.825 - -
74. TDP2 ENSGALG00000013637 6595 0.823 - - - - - - - 0.823 - - tyrosyl-DNA phosphodiesterase 2 [Source:NCBI gene;Acc:421007]
75. WBSCR22 6082 0.822 - - - - - - 0.822 - - - Williams-Beuren syndrome chromosome region 22
76. EGLN1 ENSGALG00000041422 11032 0.821 - - - - - - 0.821 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
77. FAM207A ENSGALG00000007513 8748 0.821 - - - - - - - 0.821 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
78. C1H11ORF73 C1H11ORF73 10071 0.82 - - - - - - - 0.820 - -
79. ARHGEF7 ENSGALG00000031009 10090 0.82 - - - - - - 0.820 - - - Rho guanine nucleotide exchange factor 7 [Source:HGNC Symbol;Acc:HGNC:15607]
80. EIF5B ENSGALG00000016764 30681 0.82 - - - - - - - 0.820 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
81. NKRF ENSGALG00000008645 3531 0.817 - - - - - - 0.817 - - - NFKB repressing factor [Source:NCBI gene;Acc:422370]
82. KIF18A ENSGALG00000012160 2612 0.817 - - - - - - 0.817 - - - kinesin family member 18A [Source:NCBI gene;Acc:421607]
83. STRADA ENSGALG00000000550 6912 0.817 - - - - - - - 0.817 - - STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
84. RCN2 ENSGALG00000039284 17848 0.817 - - - - - - - 0.817 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
85. SDHD ENSGALG00000007878 25129 0.816 - - - - - - 0.816 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
86. TFDP1 ENSGALG00000016823 17019 0.816 - - - - - - 0.816 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
87. ZNF598 ENSGALG00000005598 8270 0.814 - - - - - - 0.814 - - - zinc finger protein 598 [Source:HGNC Symbol;Acc:HGNC:28079]
88. GFM1 ENSGALG00000009634 7213 0.814 - - - - - - - 0.814 - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
89. MTA3 ENSGALG00000009925 1914 0.813 - - - - - - - 0.813 - - metastasis associated 1 family member 3 [Source:HGNC Symbol;Acc:HGNC:23784]
90. KTN1 ENSGALG00000012137 4058 0.813 - - - - - - - 0.813 - - kinectin 1 [Source:NCBI gene;Acc:396335]
91. TMEM14A ENSGALG00000019894 5279 0.811 - - - - - - - 0.811 - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
92. NOP58 ENSGALG00000008454 34630 0.809 - - - - - - 0.809 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
93. SUV39H2 ENSGALG00000013920 4360 0.809 - - - - - - - 0.809 - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
94. ERLIN2 ENSGALG00000003092 18251 0.809 - - - - - - - 0.809 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
95. HOXB-7 HOXB-7 2066 0.809 - - - - - - 0.809 - - -
96. CEP76 ENSGALG00000013858 1809 0.808 - - - - - - 0.808 - - - centrosomal protein 76
97. DMD ENSGALG00000016281 5657 0.807 - - - - - - 0.807 - - - dystrophin [Source:NCBI gene;Acc:396236]
98. FAM125B FAM125B 2953 0.807 - - - - - - 0.807 - - -
99. CHMP4B ENSGALG00000002095 17422 0.806 - - - - - - - 0.806 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
100. NDUFC2 ENSGALG00000029172 26136 0.804 - - - - - - 0.804 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]

There are 593 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA