Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for YRDC

Gene Name Gene ID Reads Annotation
YRDC ENSDARG00000041428 221 yrdC N(6)-threonylcarbamoyltransferase domain containing [Source:ZFIN;Acc:ZDB-GENE-070410-65]










Genes with expression patterns similar to YRDC

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. YRDC ENSDARG00000041428 221 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 yrdC N(6)-threonylcarbamoyltransferase domain containing [Source:ZFIN;Acc:ZDB-GENE-070410-65]
2. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.715 - 0.846 - - - - 0.869 - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
3. six1b ENSDARG00000026473 1908 1.688 - 0.860 - - - - 0.828 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
4. stac3 ENSDARG00000098883 1765 1.666 - 0.825 - - - - 0.841 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
5. mlf1 ENSDARG00000077301 789 1.652 - 0.838 - - - - 0.814 - - myeloid leukemia factor 1 [Source:ZFIN;Acc:ZDB-GENE-080917-7]
6. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 1.638 - 0.792 - - - - 0.846 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
7. tnw 16679 1.63 - 0.828 - - - - 0.802 - - tenascin W, transcript variant X2
8. alpk3a ENSDARG00000078989 1992 1.627 - 0.741 - - - - 0.886 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
9. myoz2a ENSDARG00000012311 1373 1.623 - 0.838 - - - - 0.785 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
10. zgc:158296 ENSDARG00000070923 3935 1.615 - 0.797 - - - - 0.818 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
11. BX294434.1 ENSDARG00000061272 6493 1.6 - 0.767 - - - - 0.833 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
12. lrrc20 ENSDARG00000105018 1970 1.597 - 0.797 - - - - 0.800 - - leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
13. CU638714.1 ENSDARG00000100303 2132 1.596 - 0.762 - - - - 0.834 - -
14. cacng1 cacng1 3118 1.585 - 0.817 - - - - 0.768 - -
15. DNAJA4 ENSDARG00000051762 5657 1.584 - 0.759 - - - - 0.825 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
16. sh3bgr ENSDARG00000021633 3498 1.584 - 0.756 - - - - 0.828 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
17. myf6 ENSDARG00000029830 1911 1.578 - 0.744 - - - - 0.834 - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
18. srl ENSDARG00000104587 11126 1.573 - 0.768 - - - - 0.805 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
19. hspg2 ENSDARG00000076564 3440 1.568 - 0.722 - - - - 0.846 - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
20. BX470254.1 ENSDARG00000097402 1389 1.565 - 0.795 - - - - 0.770 - -
21. cand2 ENSDARG00000005749, ENSDARG00000109268, ENSDARG00000112192 356 1.565 - 0.739 - - - - 0.826 - - cullin-associated and neddylation-dissociated 2 (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-645]
22. ryr1b ENSDARG00000023797 5693 1.564 - 0.777 - - - - 0.787 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
23. C13H10orf71 3489 1.561 - 0.765 - - - - 0.796 - - chromosome 13 C10orf71 homolog
24. tgm1l1 ENSDARG00000102106 1437 1.559 - 0.775 - - - - 0.784 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
25. srpk3 ENSDARG00000005916 1546 1.557 - 0.767 - - - - 0.790 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
26. sfrp2 ENSDARG00000070050, ENSDARG00000114620 1681 1.554 - 0.772 - - - - 0.782 - - secreted frizzled-related protein 2 [Source:ZFIN;Acc:ZDB-GENE-061013-293]
27. tmod1 ENSDARG00000078318 470 1.552 - 0.789 - - - - 0.763 - - tropomodulin 1 [Source:ZFIN;Acc:ZDB-GENE-090312-131]
28. nmrk2 ENSDARG00000067848 10293 1.551 - 0.748 - - - - 0.803 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
29. mybphb ENSDARG00000003081 5208 1.544 - 0.762 - - - - 0.782 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
30. trim55a ENSDARG00000029596 2858 1.542 - 0.798 - - - - 0.744 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
31. klhl21 ENSDARG00000039255 2550 1.539 - 0.787 - - - - 0.752 - - kelch-like family member 21 [Source:ZFIN;Acc:ZDB-GENE-040426-2627]
32. hspb7 ENSDARG00000104441 1417 1.536 - 0.712 - - - - 0.824 - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
33. ntmt1 ENSDARG00000022399 5779 1.536 - 0.724 - - - - 0.812 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
34. usp28 ENSDARG00000008880 1850 1.535 - 0.726 - - - - 0.809 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
35. MYOM3 2720 1.525 - 0.792 - - - - 0.733 - - myomesin 3, transcript variant X2
36. trdn ENSDARG00000041779 4283 1.525 - 0.775 - - - - 0.750 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
37. PACS1 PACS1 2061 1.525 - 0.814 - - - 0.711 - - -
38. CRAT CRAT 521 1.524 - 0.808 - - - - 0.716 - -
39. gypc ENSDARG00000041546 1487 1.524 - 0.776 - - - - 0.748 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
40. asb2a asb2a 845 1.522 - 0.764 - - - - 0.758 - -
41. PHB2 PHB2 3755 1.518 - 0.750 - - - - 0.768 - -
42. mef2aa ENSDARG00000031756 2699 1.518 - 0.796 - - - - 0.722 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
43. hdac9b ENSDARG00000056642 1148 1.517 - 0.715 - - - - 0.802 - - histone deacetylase 9b [Source:ZFIN;Acc:ZDB-GENE-040109-7]
44. cspg4 ENSDARG00000078227 1084 1.517 - 0.720 - - - - 0.797 - - chondroitin sulfate proteoglycan 4 [Source:ZFIN;Acc:ZDB-GENE-050519-1]
45. hhatla ENSDARG00000039051 6598 1.517 - 0.702 - - - - 0.815 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
46. enah ENSDARG00000032049 1526 1.516 - 0.783 - - - - 0.733 - - enabled homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010323-11]
47. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.509 - 0.733 - - - - 0.776 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
48. si:ch211-89o9.4 ENSDARG00000093237 153 1.508 - 0.744 - - - - 0.764 - - si:ch211-89o9.4 [Source:ZFIN;Acc:ZDB-GENE-090313-134]
49. xirp2a ENSDARG00000071113 7113 1.508 - 0.789 - - - - 0.719 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
50. chrna1 ENSDARG00000009021 2931 1.506 - 0.722 - - - - 0.784 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
51. prx ENSDARG00000017246 6183 1.505 - 0.702 - - - - 0.803 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
52. rp42-pen rp42-pen 3395 1.504 - 0.728 - - - - 0.776 - -
53. CU302436.1 ENSDARG00000114500 1619 1.503 0.769 0.734 - - - - - - - si:dkey-108k21.25 [Source:NCBI gene;Acc:103909883]
54. mybpc2b ENSDARG00000021265 9618 1.502 - 0.754 - - - - 0.748 - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
55. lrrc3ca ENSDARG00000079371 180 1.498 - 0.712 - - - 0.786 - - - leucine rich repeat containing 3Ca [Source:ZFIN;Acc:ZDB-GENE-080327-9]
56. pitx3 ENSDARG00000070069 363 1.497 0.765 - - - - - 0.732 - - paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]
57. GTPBP8 ENSDARG00000075033 231 1.493 - 0.738 - - - - 0.755 - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
58. pcmt ENSDARG00000015201 5132 1.492 - 0.743 - - - - 0.749 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:ZFIN;Acc:ZDB-GENE-990415-134]
59. txlnbb ENSDARG00000076241 6396 1.488 - 0.740 - - - - 0.748 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
60. hapln1a ENSDARG00000089769 12334 1.485 - 0.734 - - - - 0.751 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
61. TENC1 TENC1 1729 1.481 - 0.707 - - - - 0.774 - -
62. ddx49 ENSDARG00000012899 1604 1.48 - 0.734 - - - - 0.746 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]
63. ispd ENSDARG00000005034 173 1.471 - 0.746 - - - - 0.725 - - isoprenoid synthase domain containing [Source:ZFIN;Acc:ZDB-GENE-061110-16]
64. ehd1b ENSDARG00000014793, ENSDARG00000110243, ENSDARG00000110919 2496 1.459 - 0.711 - - - - 0.748 - - EH-domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2069]
65. klhl40a ENSDARG00000039052 2537 1.457 - 0.712 - - - - 0.745 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
66. NRAP ENSDARG00000009341 3565 1.455 - 0.704 - - - - 0.751 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
67. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 1.453 - 0.748 - - - - 0.705 - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
68. sms ENSDARG00000008155 1192 1.443 - 0.708 - - - - 0.735 - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
69. notum2 ENSDARG00000088411 823 1.44 - 0.740 - - - - 0.700 - - notum pectinacetylesterase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-77]
70. CR392006.1 CR392006.1 1401 1.44 - 0.712 - - - - 0.728 - -
71. PTPLA PTPLA 4044 1.438 - 0.702 - - - - 0.736 - -
72. eef2l2 ENSDARG00000035256 6815 1.43 - 0.729 - - - - 0.701 - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
73. pygmb ENSDARG00000013317 5454 1.414 - 0.713 - - - - 0.701 - - phosphorylase, glycogen, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-1206]
74. loxl5b ENSDARG00000076904 468 1.407 - 0.703 - - - - 0.704 - - lysyl oxidase-like 5b [Source:ZFIN;Acc:ZDB-GENE-070818-3]
75. pih1d1 ENSDARG00000037955 301 0.916 0.916 - - - - - - - - PIH1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-147]
76. zgc:174273 zgc:174273 374 0.916 - - - - - 0.916 - - -
77. si:dkeyp-87e3.1 si:dkeyp-87e3.1 245 0.898 - - - - - - 0.898 - -
78. si:ch211-222k6.3 ENSDARG00000071578 127 0.881 - - - - - 0.881 - - - si:ch211-222k6.3 [Source:ZFIN;Acc:ZDB-GENE-050208-567]
79. tnnt2e ENSDARG00000045822, ENSDARG00000109924 3288 0.879 - - - - - - 0.879 - - troponin T2e, cardiac [Source:ZFIN;Acc:ZDB-GENE-041210-27]
80. edc3 ENSDARG00000051931 780 0.878 - - - - - 0.878 - - - enhancer of mRNA decapping 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-287]
81. C12H10orf71 C12H10orf71 595 0.877 - 0.877 - - - - - - -
82. cxcl12a ENSDARG00000037116 5433 0.873 - - - - - - 0.873 - - chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]
83. wdr62 ENSDARG00000060312 554 0.87 - 0.870 - - - - - - - WD repeat domain 62 [Source:ZFIN;Acc:ZDB-GENE-060503-291]
84. TNS1 TNS1 628 0.87 - - - - - - 0.870 - -
85. slc6a8 ENSDARG00000043646 1114 0.867 - - - - - - 0.867 - - solute carrier family 6 (neurotransmitter transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-071024-2]
86. plod2 ENSDARG00000011821 1656 0.864 - - - - - - 0.864 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
87. lrig1 ENSDARG00000075625 2027 0.863 - - - - - - 0.863 - - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
88. tnnt2c ENSDARG00000032242 28801 0.863 - - - - - - 0.863 - - troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
89. ppm1la ENSDARG00000063218 2142 0.862 - 0.862 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
90. tgm2a ENSDARG00000070157 4516 0.862 - - - - - - 0.862 - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
91. zgc:174895 ENSDARG00000079416, ENSDARG00000113559 451 0.857 - - - - - - 0.857 - - zgc:174895 [Source:ZFIN;Acc:ZDB-GENE-070928-41]
92. mapkapk3 ENSDARG00000111612 370 0.854 - - - - - - 0.854 - - mitogen-activated protein kinase-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-061215-124]
93. si:dkey-86e18.1 ENSDARG00000043536 75 0.853 - 0.853 - - - - - - - si:dkey-86e18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-18]
94. pard3 pard3 161 0.851 - 0.851 - - - - - - -
95. scml4 ENSDARG00000017266 194 0.851 - 0.851 - - - - - - - Scm polycomb group protein like 4 [Source:ZFIN;Acc:ZDB-GENE-041210-338]
96. USP6 USP6 613 0.849 - 0.849 - - - - - - -
97. vwde ENSDARG00000103443 5758 0.849 - - - - - - 0.849 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
98. rev3l ENSDARG00000058801 784 0.848 - 0.848 - - - - - - - REV3-like, polymerase (DNA directed), zeta, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-050302-55]
99. MUSTN1 MUSTN1 1882 0.847 - - - - - - 0.847 - -
100. si:ch73-387e10.3 si:ch73-387e10.3 517 0.846 - - - - - 0.846 - - -

There are 719 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA